FFCP PHASE1:Hg19::chr1:207497946..207497958,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1604|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2665|TSSclassifier=S|UniProt=|association_with_transcript=-44bp_to_ENST00000465534,ENST00000476590_5end|coexpression_cluster_id=C531|description=CAGE_peak_11_at_CD55_5end|id=chr1:207497946..207497958,+|ontology_enrichment_celltype=CL:0000860!3.60e-17!45;CL:0002057!6.17e-15!42;CL:0000766!1.14e-09!76;CL:0000839!2.94e-08!70;CL:0002009!3.10e-08!65;CL:0002194!3.67e-08!63;CL:0000576!3.67e-08!63;CL:0000040!3.67e-08!63;CL:0000559!3.67e-08!63;CL:0000557!4.24e-08!71;CL:0000763!6.01e-07!112;CL:0000049!6.01e-07!112;CL:0000738!6.92e-07!140|ontology_enrichment_celltype_v019=CL:0000860;3.18e-17;33!CL:0002057;3.18e-17;33!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0000775;6.02e-12;3!CL:0000094;1.18e-07;8!CL:0000576;1.31e-07;48!CL:0000766;4.15e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,2.48e-14,42;CL:0002057,2.48e-14,42;CL:0000766,3.14e-12,72;CL:0000473,3.99e-12,48;CL:0000234,3.99e-12,48;CL:0000775,4.76e-12,3;CL:0002194,4.69e-09,59;CL:0000576,4.69e-09,59;CL:0000040,4.69e-09,59;CL:0000559,4.69e-09,59;CL:0002009,1.16e-08,61;CL:0000839,8.75e-08,66;CL:0000094,1.05e-07,8;CL:0000557,1.26e-07,67;CL:0000763,8.30e-07,108;CL:0000049,8.30e-07,108|ontology_enrichment_development_v019=UBERON:0008947;5.72e-13;29!CL:0002057;1.38e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.01e-08!9|ontology_enrichment_uberon_v019=UBERON:0001737;4.45e-31;9!UBERON:0001557;4.45e-31;9!UBERON:0000065;1.21e-07;44!UBERON:0000072;1.87e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.01e-31,9;UBERON:0001557,5.66e-14,19;UBERON:0008947,1.97e-09,38;UBERON:0003258,1.97e-09,38|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0.581592955118259,0,0,0.232429036905685,0.822335776043652,0.309706370895104,2.58923153089935,0.256160706529101,0.709446689665756,3.44745680736619,3.22742341791913,2.70852973188684,1.69418105588344,0.818718450173537,0.224723484445085,4.28517449319264,2.88836124368484,6.39337125799041,0.659702600373432,0.797854630486527,0,3.77272010217159,6.24123747160254,4.9825779919646,0.75374599577023,1.0429658368404,0.434377689410233,3.02699751316684,0.736555271975129,2.84816148696796,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0.285012743741249,0.19891667719909,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0,0.393419540227666,0.393010762749165,0,0,0.32592226663359,0.946895611469467,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0.579386075843295,0,1.94653948121054,0,0.443458794925128,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,2.63560834872127,0,0,0,0.12663051166458,0,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0,0.280901613404497,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,2.01121560067735,2.69735504124963,2.16909926895134,5.84558055481688,1.96091499683166,1.66089433377768,1.75280700608214,1.37355025587742,5.00171304030308,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0.469634776943287,0.144366447761074,0,0,0,1.71697232418975,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,4.49404214368309,5.9832291840805,1.65766205374414,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0.120859449591622,0,0.368323955743585,0.114814448164607,0.364182336013434,0,0.451199612907412,0.15403067420883,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2665 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000465534,ENST00000476590_5end | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_11_at_CD55_5end | |||
|id=chr1:207497946..207497958,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.60e-17!45;CL:0002057!6.17e-15!42;CL:0000766!1.14e-09!76;CL:0000839!2.94e-08!70;CL:0002009!3.10e-08!65;CL:0002194!3.67e-08!63;CL:0000576!3.67e-08!63;CL:0000040!3.67e-08!63;CL:0000559!3.67e-08!63;CL:0000557!4.24e-08!71;CL:0000763!6.01e-07!112;CL:0000049!6.01e-07!112;CL:0000738!6.92e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-17;33!CL:0002057;3.18e-17;33!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0000775;6.02e-12;3!CL:0000094;1.18e-07;8!CL:0000576;1.31e-07;48!CL:0000766;4.15e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.48e-14,42;CL:0002057,2.48e-14,42;CL:0000766,3.14e-12,72;CL:0000473,3.99e-12,48;CL:0000234,3.99e-12,48;CL:0000775,4.76e-12,3;CL:0002194,4.69e-09,59;CL:0000576,4.69e-09,59;CL:0000040,4.69e-09,59;CL:0000559,4.69e-09,59;CL:0002009,1.16e-08,61;CL:0000839,8.75e-08,66;CL:0000094,1.05e-07,8;CL:0000557,1.26e-07,67;CL:0000763,8.30e-07,108;CL:0000049,8.30e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.72e-13;29!CL:0002057;1.38e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.01e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.45e-31;9!UBERON:0001557;4.45e-31;9!UBERON:0000065;1.21e-07;44!UBERON:0000072;1.87e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.01e-31,9;UBERON:0001557,5.66e-14,19;UBERON:0008947,1.97e-09,38;UBERON:0003258,1.97e-09,38 | |||
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| |||
|short_description=p11@CD55 | |||
}} |
Revision as of 03:14, 12 September 2013
Short description: | p11@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | -44bp_to_ENST00000465534, ENST00000476590_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.48e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-14 | 42 |
myeloid leukocyte | 3.14e-12 | 72 |
defensive cell | 3.99e-12 | 48 |
phagocyte | 3.99e-12 | 48 |
neutrophil | 4.76e-12 | 3 |
monopoietic cell | 4.69e-09 | 59 |
monocyte | 4.69e-09 | 59 |
monoblast | 4.69e-09 | 59 |
promonocyte | 4.69e-09 | 59 |
macrophage dendritic cell progenitor | 1.16e-08 | 61 |
myeloid lineage restricted progenitor cell | 8.75e-08 | 66 |
granulocyte | 1.05e-07 | 8 |
granulocyte monocyte progenitor cell | 1.26e-07 | 67 |
myeloid cell | 8.30e-07 | 108 |
common myeloid progenitor | 8.30e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.01e-31 | 9 |
upper respiratory tract | 5.66e-14 | 19 |
respiratory primordium | 1.97e-09 | 38 |
endoderm of foregut | 1.97e-09 | 38 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.