FFCP PHASE1:Hg19::chr1:206760473..206760494,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2557|description=CAGE_peak_at_chr1:206760473..206760494,+|id=chr1:206760473..206760494,+|ontology_enrichment_celltype=CL:0000738!1.00e-55!140;CL:0000037!3.17e-46!172;CL:0000566!3.17e-46!172;CL:0000988!1.26e-43!182;CL:0002031!4.67e-43!124;CL:0002032!6.66e-43!165;CL:0000837!6.66e-43!165;CL:0002087!2.46e-41!119;CL:0000766!3.97e-35!76;CL:0002057!9.36e-34!42;CL:0000860!9.45e-32!45;CL:0000557!1.55e-30!71;CL:0000839!5.36e-28!70;CL:0000763!8.62e-28!112;CL:0000049!8.62e-28!112;CL:0002009!5.72e-27!65;CL:0002194!3.74e-25!63;CL:0000576!3.74e-25!63;CL:0000040!3.74e-25!63;CL:0000559!3.74e-25!63;CL:0000542!2.37e-13!53;CL:0000051!2.37e-13!53;CL:0000838!6.22e-13!52;CL:0000134!1.89e-10!358;CL:0002320!4.79e-10!365;CL:0000791!4.85e-10!18;CL:0000789!4.85e-10!18;CL:0002420!4.85e-10!18;CL:0002419!4.85e-10!18;CL:0000790!4.85e-10!18;CL:0000084!4.49e-09!25;CL:0000827!4.49e-09!25;CL:0000219!3.38e-08!390;CL:0002393!2.26e-07!9;CL:0002397!2.26e-07!9;CL:0000094!3.69e-07!8;CL:0000625!4.49e-07!11|ontology_enrichment_celltype_v019=CL:0000860;5.58e-37;33!CL:0002057;5.58e-37;33!CL:0000473;1.40e-30;39!CL:0000234;1.40e-30;39!CL:0000766;3.37e-26;69!CL:0000576;2.40e-23;48!CL:0002087;1.76e-13;104!CL:0000738;9.29e-12;136!CL:0000763;5.08e-11;100!CL:0000775;1.01e-10;3!CL:0000094;7.53e-10;8!CL:0000226;1.26e-09;3!CL:0000842;1.26e-09;3!CL:0000097;2.49e-09;5!CL:0000875;2.97e-09;3!CL:0000623;2.97e-09;3!CL:0002396;2.97e-09;3!CL:0000988;2.40e-07;177!CL:0000081;4.91e-07;11!CL:0001014;7.75e-07;2!CL:0001016;7.75e-07;2|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-52,72;CL:0000738,2.71e-52,136;CL:0000860,1.81e-48,42;CL:0002057,1.81e-48,42;CL:0000473,2.72e-48,48;CL:0000234,2.72e-48,48;CL:0000557,2.14e-47,67;CL:0000839,1.88e-42,66;CL:0002009,5.85e-41,61;CL:0000037,7.84e-40,168;CL:0002031,1.29e-39,120;CL:0000988,3.90e-37,177;CL:0002194,6.33e-37,59;CL:0000576,6.33e-37,59;CL:0000040,6.33e-37,59;CL:0000559,6.33e-37,59;CL:0000763,9.17e-36,108;CL:0000049,9.17e-36,108;CL:0002087,1.14e-35,115;CL:0002032,5.19e-35,161;CL:0000837,5.19e-35,161;CL:0000134,5.45e-12,354;CL:0002320,1.65e-11,361;CL:0000775,9.75e-11,3;CL:0000094,7.40e-10,8;CL:0000219,8.12e-10,386;CL:0000875,1.48e-09,3;CL:0002396,1.48e-09,3;CL:0000226,1.92e-09,3;CL:0000842,1.92e-09,3;CL:0000097,2.03e-09,5;CL:0002028,2.03e-09,5;CL:0000623,5.08e-09,3;CL:0000825,5.08e-09,3;CL:0002393,4.89e-08,9;CL:0002397,4.89e-08,9;CL:0000048,9.02e-08,427;CL:0000723,1.72e-07,433;CL:0000034,3.93e-07,441;CL:0000081,4.85e-07,11;CL:0001014,6.45e-07,2;CL:0001016,6.45e-07,2|ontology_enrichment_development_v019=CL:0002057;5.70e-36;42!CL:0000049;6.46e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.89e-38!102;UBERON:0003061!3.89e-38!102;UBERON:0002193!6.84e-35!112;UBERON:0002371!5.16e-26!80;UBERON:0001474!7.91e-23!86;UBERON:0002405!6.64e-21!115;UBERON:0004765!2.87e-18!101;UBERON:0001434!2.87e-18!101;UBERON:0003081!7.93e-10!216;UBERON:0000178!1.27e-09!15;UBERON:0000179!1.27e-09!15;UBERON:0000463!1.27e-09!15;UBERON:0002384!5.83e-09!375;UBERON:0002204!3.62e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.77e-47,98;UBERON:0003061,5.77e-47,98;UBERON:0002193,6.29e-44,108;UBERON:0002371,1.10e-40,76;UBERON:0002405,3.01e-40,93;UBERON:0001474,5.04e-37,82;UBERON:0004765,6.75e-33,90;UBERON:0001434,1.15e-28,100;UBERON:0003081,6.80e-17,203;UBERON:0002204,1.86e-13,167;UBERON:0002384,7.50e-11,371;UBERON:0000926,3.61e-07,315;UBERON:0004120,3.61e-07,315;UBERON:0006603,3.61e-07,315|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.246301768349837,0.157421562627358,0.393364276848904,0.767658796194425,1.39334510984468,0,0,0,0,0,0,0,2.00544447470142,0.868043482863407,0,0.32389366601898,0,4.36194716338694,1.13362783106643,0.727752183563449,1.39457422143411,2.87817521615278,1.23882548358041,1.7261543539329,1.5369642391746,2.36482229888585,1.72372840368309,1.93645405075148,0,3.20011977222428,1.09162460023138,2.24723484445085,8.87643287875617,8.66508373105453,8.31138263538754,1.9791078011203,2.19410023383795,0.426224750532694,2.90209238628584,0,0.622822248995575,1.50749199154046,3.65038042894141,1.73751075764093,0.605399502633369,0.368277635987565,1.58231193720442,0.633765858935825,1.70083439972035,0.209658645508376,0.561643155732475,0.600707571366025,0.16072558669708,2.56511469367124,1.79025009479181,1.46131323011707,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,1.14681968437569,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.616804496998528,1.5046784585161,0.32592226663359,0,3.89653456815823,1.55974639639243,0.589211814949674,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2557 | |||
|description=CAGE_peak_at_chr1:206760473..206760494,+ | |||
|id=chr1:206760473..206760494,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.00e-55!140;CL:0000037!3.17e-46!172;CL:0000566!3.17e-46!172;CL:0000988!1.26e-43!182;CL:0002031!4.67e-43!124;CL:0002032!6.66e-43!165;CL:0000837!6.66e-43!165;CL:0002087!2.46e-41!119;CL:0000766!3.97e-35!76;CL:0002057!9.36e-34!42;CL:0000860!9.45e-32!45;CL:0000557!1.55e-30!71;CL:0000839!5.36e-28!70;CL:0000763!8.62e-28!112;CL:0000049!8.62e-28!112;CL:0002009!5.72e-27!65;CL:0002194!3.74e-25!63;CL:0000576!3.74e-25!63;CL:0000040!3.74e-25!63;CL:0000559!3.74e-25!63;CL:0000542!2.37e-13!53;CL:0000051!2.37e-13!53;CL:0000838!6.22e-13!52;CL:0000134!1.89e-10!358;CL:0002320!4.79e-10!365;CL:0000791!4.85e-10!18;CL:0000789!4.85e-10!18;CL:0002420!4.85e-10!18;CL:0002419!4.85e-10!18;CL:0000790!4.85e-10!18;CL:0000084!4.49e-09!25;CL:0000827!4.49e-09!25;CL:0000219!3.38e-08!390;CL:0002393!2.26e-07!9;CL:0002397!2.26e-07!9;CL:0000094!3.69e-07!8;CL:0000625!4.49e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.58e-37;33!CL:0002057;5.58e-37;33!CL:0000473;1.40e-30;39!CL:0000234;1.40e-30;39!CL:0000766;3.37e-26;69!CL:0000576;2.40e-23;48!CL:0002087;1.76e-13;104!CL:0000738;9.29e-12;136!CL:0000763;5.08e-11;100!CL:0000775;1.01e-10;3!CL:0000094;7.53e-10;8!CL:0000226;1.26e-09;3!CL:0000842;1.26e-09;3!CL:0000097;2.49e-09;5!CL:0000875;2.97e-09;3!CL:0000623;2.97e-09;3!CL:0002396;2.97e-09;3!CL:0000988;2.40e-07;177!CL:0000081;4.91e-07;11!CL:0001014;7.75e-07;2!CL:0001016;7.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-52,72;CL:0000738,2.71e-52,136;CL:0000860,1.81e-48,42;CL:0002057,1.81e-48,42;CL:0000473,2.72e-48,48;CL:0000234,2.72e-48,48;CL:0000557,2.14e-47,67;CL:0000839,1.88e-42,66;CL:0002009,5.85e-41,61;CL:0000037,7.84e-40,168;CL:0002031,1.29e-39,120;CL:0000988,3.90e-37,177;CL:0002194,6.33e-37,59;CL:0000576,6.33e-37,59;CL:0000040,6.33e-37,59;CL:0000559,6.33e-37,59;CL:0000763,9.17e-36,108;CL:0000049,9.17e-36,108;CL:0002087,1.14e-35,115;CL:0002032,5.19e-35,161;CL:0000837,5.19e-35,161;CL:0000134,5.45e-12,354;CL:0002320,1.65e-11,361;CL:0000775,9.75e-11,3;CL:0000094,7.40e-10,8;CL:0000219,8.12e-10,386;CL:0000875,1.48e-09,3;CL:0002396,1.48e-09,3;CL:0000226,1.92e-09,3;CL:0000842,1.92e-09,3;CL:0000097,2.03e-09,5;CL:0002028,2.03e-09,5;CL:0000623,5.08e-09,3;CL:0000825,5.08e-09,3;CL:0002393,4.89e-08,9;CL:0002397,4.89e-08,9;CL:0000048,9.02e-08,427;CL:0000723,1.72e-07,433;CL:0000034,3.93e-07,441;CL:0000081,4.85e-07,11;CL:0001014,6.45e-07,2;CL:0001016,6.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-36;42!CL:0000049;6.46e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.89e-38!102;UBERON:0003061!3.89e-38!102;UBERON:0002193!6.84e-35!112;UBERON:0002371!5.16e-26!80;UBERON:0001474!7.91e-23!86;UBERON:0002405!6.64e-21!115;UBERON:0004765!2.87e-18!101;UBERON:0001434!2.87e-18!101;UBERON:0003081!7.93e-10!216;UBERON:0000178!1.27e-09!15;UBERON:0000179!1.27e-09!15;UBERON:0000463!1.27e-09!15;UBERON:0002384!5.83e-09!375;UBERON:0002204!3.62e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.77e-47,98;UBERON:0003061,5.77e-47,98;UBERON:0002193,6.29e-44,108;UBERON:0002371,1.10e-40,76;UBERON:0002405,3.01e-40,93;UBERON:0001474,5.04e-37,82;UBERON:0004765,6.75e-33,90;UBERON:0001434,1.15e-28,100;UBERON:0003081,6.80e-17,203;UBERON:0002204,1.86e-13,167;UBERON:0002384,7.50e-11,371;UBERON:0000926,3.61e-07,315;UBERON:0004120,3.61e-07,315;UBERON:0006603,3.61e-07,315 | |||
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| |||
|short_description=p@chr1:206760473..206760494,+ | |||
}} |
Revision as of 03:09, 12 September 2013
Short description: | p@chr1:206760473..206760494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:206760473..206760494, + |
Coexpression cluster: | C2557_Neutrophils_CD14_Mast_lymph_spleen_blood_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.77e-47 | 98 |
blood island | 5.77e-47 | 98 |
hemolymphoid system | 6.29e-44 | 108 |
bone marrow | 1.10e-40 | 76 |
immune system | 3.01e-40 | 93 |
bone element | 5.04e-37 | 82 |
skeletal element | 6.75e-33 | 90 |
skeletal system | 1.15e-28 | 100 |
lateral plate mesoderm | 6.80e-17 | 203 |
musculoskeletal system | 1.86e-13 | 167 |
connective tissue | 7.50e-11 | 371 |
mesoderm | 3.61e-07 | 315 |
mesoderm-derived structure | 3.61e-07 | 315 |
presumptive mesoderm | 3.61e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.