FFCP PHASE1:Hg19::chr1:203452470..203452500,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5549|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9357|TSSclassifier=N|UniProt=Q6FHG6,Q6FG38|association_with_transcript=157bp_to_CR541787,CR542270_5end|coexpression_cluster_id=C930|description=CAGE_peak_4_at_PRELP_5end|id=chr1:203452470..203452500,+|ontology_enrichment_celltype=CL:0000136!2.84e-10!15;CL:0000153!2.58e-07!9;CL:0000447!2.58e-07!9|ontology_enrichment_celltype_v019=CL:0000136;3.39e-16;13!CL:0000153;1.40e-12;9!CL:0000447;1.40e-12;9!CL:0000138;6.11e-10;6!CL:0002615;1.26e-08;3!CL:0000327;4.83e-07;15|ontology_enrichment_celltype_v019_2=CL:0000136,1.11e-13,15;CL:0000153,1.31e-12,9;CL:0000447,1.31e-12,9;CL:0000058,5.73e-10,6;CL:0000138,5.73e-10,6;CL:0002615,1.28e-08,3;CL:0000327,4.65e-07,15|ontology_enrichment_development_v019=UBERON:0006603;8.70e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.75e-61!115;UBERON:0001049!1.23e-16!57;UBERON:0005068!1.23e-16!57;UBERON:0006241!1.23e-16!57;UBERON:0007135!1.23e-16!57;UBERON:0003075!3.03e-13!86;UBERON:0007284!3.03e-13!86;UBERON:0003080!1.39e-12!42;UBERON:0002616!1.90e-12!59;UBERON:0002346!4.27e-12!90;UBERON:0002780!1.08e-11!41;UBERON:0001890!1.08e-11!41;UBERON:0006240!1.08e-11!41;UBERON:0001017!2.49e-10!82;UBERON:0005743!3.46e-10!86;UBERON:0000955!1.03e-09!69;UBERON:0006238!1.03e-09!69;UBERON:0004457!1.10e-09!12;UBERON:0000042!1.10e-09!12;UBERON:0001893!1.31e-08!34;UBERON:0000073!3.15e-08!94;UBERON:0001016!3.15e-08!94;UBERON:0002791!4.50e-08!33;UBERON:0002020!8.69e-08!34;UBERON:0003528!8.69e-08!34;UBERON:0003688!9.21e-08!6;UBERON:0002358!9.21e-08!6;UBERON:0003684!9.21e-08!6;UBERON:0001178!9.21e-08!6;UBERON:0003056!9.26e-08!61;UBERON:0001869!1.13e-07!32;UBERON:0000062!1.24e-07!511;UBERON:0002619!3.38e-07!22;UBERON:0000153!4.11e-07!129;UBERON:0007811!4.11e-07!129;UBERON:0000475!6.53e-07!365|ontology_enrichment_uberon_v019=UBERON:0004457;1.11e-09;9!UBERON:0000042;1.11e-09;9!UBERON:0003978;2.39e-08;3!UBERON:0000946;2.39e-08;3!UBERON:0004151;7.54e-08;3!UBERON:0006947;1.29e-07;3!UBERON:0004054;1.29e-07;3!UBERON:0007023;1.75e-07;114!UBERON:0003688;6.25e-07;6!UBERON:0002358;6.25e-07;6!UBERON:0003684;6.25e-07;6!UBERON:0001178;6.25e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.40e-30,114;UBERON:0004457,9.64e-12,12;UBERON:0000042,9.64e-12,12;UBERON:0003978,2.28e-08,3;UBERON:0009751,2.28e-08,3;UBERON:0000946,2.28e-08,3;UBERON:0002523,2.28e-08,3;UBERON:0005983,2.28e-08,3;UBERON:0002165,2.28e-08,3;UBERON:0002062,2.28e-08,3;UBERON:0007280,2.28e-08,3;UBERON:0004151,7.55e-08,3;UBERON:0006947,1.43e-07,3;UBERON:0004054,1.43e-07,3;UBERON:0003688,6.60e-07,6;UBERON:0002358,6.60e-07,6;UBERON:0003684,6.60e-07,6;UBERON:0001178,6.60e-07,6|phase1_expression=10.1739892391512,5.1384125733836,14.659258025981,13.009528785907,17.4314826826642,12.2127393374052,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,4.69870898099936,1.50401373190767,12.7464936685525,11.1340032587154,53.5298357332899,0,0,0.087834785693126,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0,3.7671823494661,1.2813443329114,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.460249493211497,1.93975268182574,0.355009592516614,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.514137463516618,0.300343057843917,2.85826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,2.0694614258501,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.12264037773229,3.07533958213682,0.511707249066704,0.482561763430822,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31591182698828,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,15.1997497414318,10.8667314676768,0,0,0,0,0,7.15492885903522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64398257704175,0,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0,0,0,18.7293108956006,0.552567831062295,0,0,0,1.24415835064723,0,0,0,13.5141465722599,0,0,0,0.371072392647405,0,0,0,12.3249927823915,0,0,0,0,0,0,0,0.964771509003264,0,0.221158519862449,0.591095237907095,1.09692698576986,0,0,9.1570807619518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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9357 | |||
|TSSclassifier=N | |||
|UniProt=Q6FHG6,Q6FG38 | |||
|association_with_transcript=157bp_to_CR541787,CR542270_5end | |||
|coexpression_cluster_id=C930 | |||
|description=CAGE_peak_4_at_PRELP_5end | |||
|id=chr1:203452470..203452500,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.84e-10!15;CL:0000153!2.58e-07!9;CL:0000447!2.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.39e-16;13!CL:0000153;1.40e-12;9!CL:0000447;1.40e-12;9!CL:0000138;6.11e-10;6!CL:0002615;1.26e-08;3!CL:0000327;4.83e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.11e-13,15;CL:0000153,1.31e-12,9;CL:0000447,1.31e-12,9;CL:0000058,5.73e-10,6;CL:0000138,5.73e-10,6;CL:0002615,1.28e-08,3;CL:0000327,4.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006603;8.70e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-61!115;UBERON:0001049!1.23e-16!57;UBERON:0005068!1.23e-16!57;UBERON:0006241!1.23e-16!57;UBERON:0007135!1.23e-16!57;UBERON:0003075!3.03e-13!86;UBERON:0007284!3.03e-13!86;UBERON:0003080!1.39e-12!42;UBERON:0002616!1.90e-12!59;UBERON:0002346!4.27e-12!90;UBERON:0002780!1.08e-11!41;UBERON:0001890!1.08e-11!41;UBERON:0006240!1.08e-11!41;UBERON:0001017!2.49e-10!82;UBERON:0005743!3.46e-10!86;UBERON:0000955!1.03e-09!69;UBERON:0006238!1.03e-09!69;UBERON:0004457!1.10e-09!12;UBERON:0000042!1.10e-09!12;UBERON:0001893!1.31e-08!34;UBERON:0000073!3.15e-08!94;UBERON:0001016!3.15e-08!94;UBERON:0002791!4.50e-08!33;UBERON:0002020!8.69e-08!34;UBERON:0003528!8.69e-08!34;UBERON:0003688!9.21e-08!6;UBERON:0002358!9.21e-08!6;UBERON:0003684!9.21e-08!6;UBERON:0001178!9.21e-08!6;UBERON:0003056!9.26e-08!61;UBERON:0001869!1.13e-07!32;UBERON:0000062!1.24e-07!511;UBERON:0002619!3.38e-07!22;UBERON:0000153!4.11e-07!129;UBERON:0007811!4.11e-07!129;UBERON:0000475!6.53e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.11e-09;9!UBERON:0000042;1.11e-09;9!UBERON:0003978;2.39e-08;3!UBERON:0000946;2.39e-08;3!UBERON:0004151;7.54e-08;3!UBERON:0006947;1.29e-07;3!UBERON:0004054;1.29e-07;3!UBERON:0007023;1.75e-07;114!UBERON:0003688;6.25e-07;6!UBERON:0002358;6.25e-07;6!UBERON:0003684;6.25e-07;6!UBERON:0001178;6.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.40e-30,114;UBERON:0004457,9.64e-12,12;UBERON:0000042,9.64e-12,12;UBERON:0003978,2.28e-08,3;UBERON:0009751,2.28e-08,3;UBERON:0000946,2.28e-08,3;UBERON:0002523,2.28e-08,3;UBERON:0005983,2.28e-08,3;UBERON:0002165,2.28e-08,3;UBERON:0002062,2.28e-08,3;UBERON:0007280,2.28e-08,3;UBERON:0004151,7.55e-08,3;UBERON:0006947,1.43e-07,3;UBERON:0004054,1.43e-07,3;UBERON:0003688,6.60e-07,6;UBERON:0002358,6.60e-07,6;UBERON:0003684,6.60e-07,6;UBERON:0001178,6.60e-07,6 | |||
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|short_description=p4@PRELP | |||
}} |
Revision as of 02:55, 12 September 2013
Short description: | p4@PRELP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PRELP_5end |
Coexpression cluster: | C930_Chondrocyte_vagina_heart_Adipocyte_aorta_bladder_mature |
Association with transcript: | 157bp_to_CR541787, CR542270_5end |
EntrezGene: | PRELP |
HGNC: | 9357 |
UniProt: | Q6FHG6Q6FG38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.11e-13 | 15 |
GAG secreting cell | 1.31e-12 | 9 |
carbohydrate secreting cell | 1.31e-12 | 9 |
chondroblast | 5.73e-10 | 6 |
chondrocyte | 5.73e-10 | 6 |
adipocyte of omentum tissue | 1.28e-08 | 3 |
extracellular matrix secreting cell | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.40e-30 | 114 |
cavity lining | 9.64e-12 | 12 |
serous membrane | 9.64e-12 | 12 |
valve | 2.28e-08 | 3 |
cardiac mesenchyme | 2.28e-08 | 3 |
cardial valve | 2.28e-08 | 3 |
tunica intima | 2.28e-08 | 3 |
heart layer | 2.28e-08 | 3 |
endocardium | 2.28e-08 | 3 |
endocardial cushion | 2.28e-08 | 3 |
presumptive endocardium | 2.28e-08 | 3 |
cardiac chamber | 7.55e-08 | 3 |
male genital duct | 1.43e-07 | 3 |
internal male genitalia | 1.43e-07 | 3 |
omentum | 6.60e-07 | 6 |
peritoneum | 6.60e-07 | 6 |
abdominal cavity | 6.60e-07 | 6 |
visceral peritoneum | 6.60e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.