FFCP PHASE1:Hg19::chr1:203444976..203444984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5549|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9357|TSSclassifier=W|UniProt=P51888|association_with_transcript=20bp_to_ENST00000343110_5end|coexpression_cluster_id=C546|description=CAGE_peak_7_at_PRELP_5end|id=chr1:203444976..203444984,+|ontology_enrichment_celltype=CL:0000136!3.35e-11!15;CL:0000153!7.39e-08!9;CL:0000447!7.39e-08!9|ontology_enrichment_celltype_v019=CL:0000136;2.89e-22;13!CL:0000153;2.87e-17;9!CL:0000447;2.87e-17;9!CL:0000138;7.07e-14;6!CL:0002615;3.00e-10;3!CL:0000327;6.94e-10;15!CL:0002617;7.42e-07;2|ontology_enrichment_celltype_v019_2=CL:0000136,7.90e-19,15;CL:0000153,3.07e-17,9;CL:0000447,3.07e-17,9;CL:0000058,6.83e-14,6;CL:0000138,6.83e-14,6;CL:0002615,4.36e-10,3;CL:0000327,7.21e-10,15;CL:0002617,8.90e-07,2|ontology_enrichment_development_v019=UBERON:0006603;1.11e-07;65!UBERON:0005062;2.68e-07;4!UBERON:0007284;2.68e-07;4!UBERON:0006965;3.87e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.92e-45!115;UBERON:0001049!2.24e-12!57;UBERON:0005068!2.24e-12!57;UBERON:0006241!2.24e-12!57;UBERON:0007135!2.24e-12!57;UBERON:0003075!3.36e-10!86;UBERON:0007284!3.36e-10!86;UBERON:0002616!8.22e-10!59;UBERON:0004457!9.08e-10!12;UBERON:0000042!9.08e-10!12;UBERON:0002346!2.80e-09!90;UBERON:0003080!9.01e-09!42;UBERON:0001017!3.23e-08!82;UBERON:0000955!3.29e-08!69;UBERON:0006238!3.29e-08!69;UBERON:0005743!3.50e-08!86;UBERON:0002780!5.13e-08!41;UBERON:0001890!5.13e-08!41;UBERON:0006240!5.13e-08!41;UBERON:0003688!7.38e-08!6;UBERON:0002358!7.38e-08!6;UBERON:0003684!7.38e-08!6;UBERON:0001178!7.38e-08!6;UBERON:0002298!1.52e-07!8|ontology_enrichment_uberon_v019=UBERON:0004457;4.42e-12;9!UBERON:0000042;4.42e-12;9!UBERON:0003978;1.33e-09;3!UBERON:0000946;1.33e-09;3!UBERON:0006947;4.78e-09;3!UBERON:0004054;4.78e-09;3!UBERON:0003688;1.85e-08;6!UBERON:0002358;1.85e-08;6!UBERON:0003684;1.85e-08;6!UBERON:0001178;1.85e-08;6!UBERON:0002133;3.87e-07;2!UBERON:0005904;6.88e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-18,114;UBERON:0004457,1.30e-11,12;UBERON:0000042,1.30e-11,12;UBERON:0003978,1.12e-09,3;UBERON:0009751,1.12e-09,3;UBERON:0000946,1.12e-09,3;UBERON:0002523,1.12e-09,3;UBERON:0005983,1.12e-09,3;UBERON:0002165,1.12e-09,3;UBERON:0002062,1.12e-09,3;UBERON:0007280,1.12e-09,3;UBERON:0006947,4.87e-09,3;UBERON:0004054,4.87e-09,3;UBERON:0003688,2.46e-08,6;UBERON:0002358,2.46e-08,6;UBERON:0003684,2.46e-08,6;UBERON:0001178,2.46e-08,6;UBERON:0002133,3.48e-07,2;UBERON:0005904,6.97e-07,4|phase1_expression=2.18014055124668,1.2846031433459,5.49722175974288,1.0007329835313,4.46961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,4.01070328508712,4.34539556882471,16.7010048880731,21.411934293316,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,1.07633781413317,3.84403299873421,0,0,0.103052529238439,0.772921620136887,0.744467425326359,0.168776332241266,0,0,0.184099797284599,3.71785930683267,1.06502877754984,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.616964956219941,0,3.71574362419752,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.460385919864187,0,1.28139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48879851773927,2.30506425071931,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,4.38345574152353,0,0,0,0,2.48831670129446,0,0,0,3.05794557474494,0,0,0,0.0927680981618513,0,0,0,3.62499787717397,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,2.30850775511391,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0.611030144933625,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9357 | |||
|TSSclassifier=W | |||
|UniProt=P51888 | |||
|association_with_transcript=20bp_to_ENST00000343110_5end | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_7_at_PRELP_5end | |||
|id=chr1:203444976..203444984,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.35e-11!15;CL:0000153!7.39e-08!9;CL:0000447!7.39e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.89e-22;13!CL:0000153;2.87e-17;9!CL:0000447;2.87e-17;9!CL:0000138;7.07e-14;6!CL:0002615;3.00e-10;3!CL:0000327;6.94e-10;15!CL:0002617;7.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.90e-19,15;CL:0000153,3.07e-17,9;CL:0000447,3.07e-17,9;CL:0000058,6.83e-14,6;CL:0000138,6.83e-14,6;CL:0002615,4.36e-10,3;CL:0000327,7.21e-10,15;CL:0002617,8.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.11e-07;65!UBERON:0005062;2.68e-07;4!UBERON:0007284;2.68e-07;4!UBERON:0006965;3.87e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.92e-45!115;UBERON:0001049!2.24e-12!57;UBERON:0005068!2.24e-12!57;UBERON:0006241!2.24e-12!57;UBERON:0007135!2.24e-12!57;UBERON:0003075!3.36e-10!86;UBERON:0007284!3.36e-10!86;UBERON:0002616!8.22e-10!59;UBERON:0004457!9.08e-10!12;UBERON:0000042!9.08e-10!12;UBERON:0002346!2.80e-09!90;UBERON:0003080!9.01e-09!42;UBERON:0001017!3.23e-08!82;UBERON:0000955!3.29e-08!69;UBERON:0006238!3.29e-08!69;UBERON:0005743!3.50e-08!86;UBERON:0002780!5.13e-08!41;UBERON:0001890!5.13e-08!41;UBERON:0006240!5.13e-08!41;UBERON:0003688!7.38e-08!6;UBERON:0002358!7.38e-08!6;UBERON:0003684!7.38e-08!6;UBERON:0001178!7.38e-08!6;UBERON:0002298!1.52e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.42e-12;9!UBERON:0000042;4.42e-12;9!UBERON:0003978;1.33e-09;3!UBERON:0000946;1.33e-09;3!UBERON:0006947;4.78e-09;3!UBERON:0004054;4.78e-09;3!UBERON:0003688;1.85e-08;6!UBERON:0002358;1.85e-08;6!UBERON:0003684;1.85e-08;6!UBERON:0001178;1.85e-08;6!UBERON:0002133;3.87e-07;2!UBERON:0005904;6.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-18,114;UBERON:0004457,1.30e-11,12;UBERON:0000042,1.30e-11,12;UBERON:0003978,1.12e-09,3;UBERON:0009751,1.12e-09,3;UBERON:0000946,1.12e-09,3;UBERON:0002523,1.12e-09,3;UBERON:0005983,1.12e-09,3;UBERON:0002165,1.12e-09,3;UBERON:0002062,1.12e-09,3;UBERON:0007280,1.12e-09,3;UBERON:0006947,4.87e-09,3;UBERON:0004054,4.87e-09,3;UBERON:0003688,2.46e-08,6;UBERON:0002358,2.46e-08,6;UBERON:0003684,2.46e-08,6;UBERON:0001178,2.46e-08,6;UBERON:0002133,3.48e-07,2;UBERON:0005904,6.97e-07,4 | |||
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|short_description=p7@PRELP | |||
}} |
Revision as of 02:55, 12 September 2013
Short description: | p7@PRELP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PRELP_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | 20bp_to_ENST00000343110_5end |
EntrezGene: | PRELP |
HGNC: | 9357 |
UniProt: | P51888 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.90e-19 | 15 |
GAG secreting cell | 3.07e-17 | 9 |
carbohydrate secreting cell | 3.07e-17 | 9 |
chondroblast | 6.83e-14 | 6 |
chondrocyte | 6.83e-14 | 6 |
adipocyte of omentum tissue | 4.36e-10 | 3 |
extracellular matrix secreting cell | 7.21e-10 | 15 |
adipocyte of breast | 8.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.43e-18 | 114 |
cavity lining | 1.30e-11 | 12 |
serous membrane | 1.30e-11 | 12 |
valve | 1.12e-09 | 3 |
cardiac mesenchyme | 1.12e-09 | 3 |
cardial valve | 1.12e-09 | 3 |
tunica intima | 1.12e-09 | 3 |
heart layer | 1.12e-09 | 3 |
endocardium | 1.12e-09 | 3 |
endocardial cushion | 1.12e-09 | 3 |
presumptive endocardium | 1.12e-09 | 3 |
male genital duct | 4.87e-09 | 3 |
internal male genitalia | 4.87e-09 | 3 |
omentum | 2.46e-08 | 6 |
peritoneum | 2.46e-08 | 6 |
abdominal cavity | 2.46e-08 | 6 |
visceral peritoneum | 2.46e-08 | 6 |
atrioventricular valve | 3.48e-07 | 2 |
duct of male reproductive system | 6.97e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.