FFCP PHASE1:Hg19::chr1:20126548..20126564,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27393|TSSclassifier=S|UniProt=|association_with_transcript=-110bp_to_ENST00000496528_5end|description=CAGE_peak_6_at_TMCO4_5end|id=chr1:20126548..20126564,-|ontology_enrichment_celltype=CL:0000066!4.77e-10!254|ontology_enrichment_celltype_v019=CL:0002603;9.08e-13;3!CL:1001319;5.53e-10;1!CL:1000600;5.53e-10;1|ontology_enrichment_celltype_v019_2=CL:0002603,6.58e-13,3;CL:1001319,3.71e-10,1;CL:1000600,3.71e-10,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.93e-14!106;DOID:0050687!2.26e-14!143;DOID:14566!2.22e-09!239;DOID:162!5.30e-09!235;DOID:1749!7.20e-07!14|ontology_enrichment_disease_v019=DOID:2355;5.53e-10;1!DOID:0060058;1.86e-08;10|ontology_enrichment_disease_v019_2=DOID:2355,9.82e-10,1;DOID:0060058,2.17e-08,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004645;5.53e-10;1!UBERON:0001256;5.53e-10;1!UBERON:0001259;5.53e-10;1!UBERON:0002037;8.26e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.71e-10,1;UBERON:0001256,3.71e-10,1;UBERON:0001259,3.71e-10,1;UBERON:0002037,7.05e-07,6;UBERON:0006215,7.05e-07,6|phase1_expression=0.54503513781167,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,1.47745269692145,2.44800829493104,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,2.63388481973026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0.570025487482497,0,0,1.75996244461323,0,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0,0,0.664601683750863,0.541607727530031,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0.434473211648397,2.43806866313962,0,0,0,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0,0.0654895377488563,0.728590576585084,0.741568885568859,0.324547393654683,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0,0.352303495931295,0.323745888736263,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0.206105058476878,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0.121973706129595,0.265059536642971,0,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0.448524337381443,0.43596006883328,0.36669142910475,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.907170879989041,0.744323423456331,0,0,0,0,0,0,0,0,0.246381468041427,0.519254429183621,0.232420756919918,0.483437798366489,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0,0.976135183992909,0.412164046590889,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0,0,0.0890320356467374,0,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0,0,1.06461206063404,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,1.13929437434833,0.238231775457789,0,0,0,0,0.854592569019785,0,0.980160863924127,0.557409525377156,0.865615277858669,0.284567373393656,0,0.199579371432817,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.485442086998054,0,0,0.23874448473769,0.296964680832639,0,0,0,0,1.15362711958732,1.05562704063997,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=255104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27393 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-110bp_to_ENST00000496528_5end | |||
|description=CAGE_peak_6_at_TMCO4_5end | |||
|id=chr1:20126548..20126564,- | |||
|ontology_enrichment_celltype=CL:0000066!4.77e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002603;9.08e-13;3!CL:1001319;5.53e-10;1!CL:1000600;5.53e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,6.58e-13,3;CL:1001319,3.71e-10,1;CL:1000600,3.71e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.93e-14!106;DOID:0050687!2.26e-14!143;DOID:14566!2.22e-09!239;DOID:162!5.30e-09!235;DOID:1749!7.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2355;5.53e-10;1!DOID:0060058;1.86e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.82e-10,1;DOID:0060058,2.17e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.53e-10;1!UBERON:0001256;5.53e-10;1!UBERON:0001259;5.53e-10;1!UBERON:0002037;8.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.71e-10,1;UBERON:0001256,3.71e-10,1;UBERON:0001259,3.71e-10,1;UBERON:0002037,7.05e-07,6;UBERON:0006215,7.05e-07,6 | |||
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| |||
|short_description=p6@TMCO4 | |||
}} |
Revision as of 02:43, 12 September 2013
Short description: | p6@TMCO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TMCO4_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENST00000496528_5end |
EntrezGene: | TMCO4 |
HGNC: | 27393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 6.58e-13 | 3 |
bladder cell | 3.71e-10 | 1 |
lower urinary tract cell | 3.71e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.71e-10 | 1 |
wall of urinary bladder | 3.71e-10 | 1 |
mucosa of urinary bladder | 3.71e-10 | 1 |
cerebellum | 7.05e-07 | 6 |
rhombic lip | 7.05e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.