FFCP PHASE1:Hg19::chr1:1846739..1846762,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=163688|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24193|TSSclassifier=S|UniProt=|association_with_transcript=34bp_to_ENST00000482402_5end|coexpression_cluster_id=C31|description=CAGE_peak_2_at_CALML6_5end|id=chr1:1846739..1846762,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;2.34e-23;1!UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000341!7.67e-26!2;UBERON:0001630!7.67e-26!2;UBERON:0005090!7.67e-26!2;UBERON:0001723!4.64e-18!3;UBERON:0001033!4.64e-18!3;UBERON:0010056!4.64e-18!3;UBERON:0000166!9.98e-15!21;UBERON:0000989!4.53e-14!1;UBERON:0008811!4.53e-14!1;UBERON:0006258!4.53e-14!1;UBERON:0005876!4.53e-14!1;UBERON:0004874!4.53e-14!1;UBERON:0002426!5.85e-14!1;UBERON:0003831!5.85e-14!1;UBERON:0003898!5.85e-14!1;UBERON:0004830!5.85e-14!1;UBERON:0001774!5.85e-14!1;UBERON:0003830!5.85e-14!1;UBERON:0005175!5.85e-14!1;UBERON:0003897!5.85e-14!1;UBERON:0001103!5.85e-14!1;UBERON:0010084!5.85e-14!1;UBERON:0007029!6.65e-14!1;UBERON:0005418!1.10e-13!1;UBERON:0001389!1.10e-13!1;UBERON:0000026!1.10e-13!1;UBERON:0008784!1.10e-13!1;UBERON:0006058!1.10e-13!1;UBERON:0003663!1.10e-13!1;UBERON:0001383!1.10e-13!1;UBERON:0004256!1.10e-13!1;UBERON:0002529!1.10e-13!1;UBERON:0004708!1.10e-13!1;UBERON:0002101!1.10e-13!1;UBERON:0004709!1.10e-13!1;UBERON:0003661!1.10e-13!1;UBERON:0002471!1.10e-13!1;UBERON:0004357!1.10e-13!1;UBERON:0009872!1.10e-13!1;UBERON:0004347!1.10e-13!1;UBERON:0005420!1.10e-13!1;UBERON:0005732!1.10e-13!1;UBERON:0006057!1.10e-13!1;UBERON:0000978!1.10e-13!1;UBERON:0002103!1.10e-13!1;UBERON:0001665!1.10e-13!1;UBERON:0003823!1.10e-13!1;UBERON:0000154!1.10e-13!1;UBERON:0005733!1.10e-13!1;UBERON:0005730!1.10e-13!1;UBERON:0002372!1.83e-13!1;UBERON:0001961!1.83e-13!1;UBERON:0001744!1.83e-13!1;UBERON:0001735!1.83e-13!1;UBERON:0001042!6.26e-12!10;UBERON:0009145!6.26e-12!10;UBERON:0000974!1.05e-11!10;UBERON:0000078!2.25e-11!18;UBERON:0000165!4.87e-11!28;UBERON:0000930!4.87e-11!28;UBERON:0006562!6.75e-11!11;UBERON:0000161!8.11e-09!35;UBERON:0008814!3.65e-08!15;UBERON:0001004!7.16e-08!72;UBERON:0003127!1.64e-07!2|ontology_enrichment_uberon_v019=UBERON:0000341;4.16e-44;2!UBERON:0001723;1.26e-30;3!UBERON:0001033;1.26e-30;3!UBERON:0000989;2.34e-23;1!UBERON:0008811;2.34e-23;1!UBERON:0002426;3.28e-23;1!UBERON:0003831;3.28e-23;1!UBERON:0003898;3.28e-23;1!UBERON:0004830;3.28e-23;1!UBERON:0003830;3.28e-23;1!UBERON:0005175;3.28e-23;1!UBERON:0001774;3.28e-23;1!UBERON:0001103;3.28e-23;1!UBERON:0007029;4.59e-23;1!UBERON:0000974;1.82e-15;6!UBERON:0001134;4.05e-13;16!UBERON:0002036;4.05e-13;16!UBERON:0005090;2.59e-12;2!UBERON:0001630;2.59e-12;2!UBERON:0002385;2.75e-07;31!UBERON:0001015;2.75e-07;31!UBERON:0000383;2.75e-07;31!UBERON:0000014;9.36e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.65e-44,2;UBERON:0001723,1.26e-30,3;UBERON:0001033,1.26e-30,3;UBERON:0010056,1.26e-30,3;UBERON:0000989,2.10e-23,1;UBERON:0008811,2.10e-23,1;UBERON:0006258,2.10e-23,1;UBERON:0005876,2.10e-23,1;UBERON:0004874,2.10e-23,1;UBERON:0002426,3.28e-23,1;UBERON:0003831,3.28e-23,1;UBERON:0003898,3.28e-23,1;UBERON:0004830,3.28e-23,1;UBERON:0003830,3.28e-23,1;UBERON:0005175,3.28e-23,1;UBERON:0001774,3.28e-23,1;UBERON:0001103,3.28e-23,1;UBERON:0010084,3.28e-23,1;UBERON:0007029,4.10e-23,1;UBERON:0005090,2.59e-12,2;UBERON:0001630,2.59e-12,2;UBERON:0001042,6.48e-10,10;UBERON:0009145,6.48e-10,10;UBERON:0000974,1.15e-09,10;UBERON:0006562,4.25e-09,11;UBERON:0000014,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=163688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24193 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000482402_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_2_at_CALML6_5end | |||
|id=chr1:1846739..1846762,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.34e-23;1!UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!7.67e-26!2;UBERON:0001630!7.67e-26!2;UBERON:0005090!7.67e-26!2;UBERON:0001723!4.64e-18!3;UBERON:0001033!4.64e-18!3;UBERON:0010056!4.64e-18!3;UBERON:0000166!9.98e-15!21;UBERON:0000989!4.53e-14!1;UBERON:0008811!4.53e-14!1;UBERON:0006258!4.53e-14!1;UBERON:0005876!4.53e-14!1;UBERON:0004874!4.53e-14!1;UBERON:0002426!5.85e-14!1;UBERON:0003831!5.85e-14!1;UBERON:0003898!5.85e-14!1;UBERON:0004830!5.85e-14!1;UBERON:0001774!5.85e-14!1;UBERON:0003830!5.85e-14!1;UBERON:0005175!5.85e-14!1;UBERON:0003897!5.85e-14!1;UBERON:0001103!5.85e-14!1;UBERON:0010084!5.85e-14!1;UBERON:0007029!6.65e-14!1;UBERON:0005418!1.10e-13!1;UBERON:0001389!1.10e-13!1;UBERON:0000026!1.10e-13!1;UBERON:0008784!1.10e-13!1;UBERON:0006058!1.10e-13!1;UBERON:0003663!1.10e-13!1;UBERON:0001383!1.10e-13!1;UBERON:0004256!1.10e-13!1;UBERON:0002529!1.10e-13!1;UBERON:0004708!1.10e-13!1;UBERON:0002101!1.10e-13!1;UBERON:0004709!1.10e-13!1;UBERON:0003661!1.10e-13!1;UBERON:0002471!1.10e-13!1;UBERON:0004357!1.10e-13!1;UBERON:0009872!1.10e-13!1;UBERON:0004347!1.10e-13!1;UBERON:0005420!1.10e-13!1;UBERON:0005732!1.10e-13!1;UBERON:0006057!1.10e-13!1;UBERON:0000978!1.10e-13!1;UBERON:0002103!1.10e-13!1;UBERON:0001665!1.10e-13!1;UBERON:0003823!1.10e-13!1;UBERON:0000154!1.10e-13!1;UBERON:0005733!1.10e-13!1;UBERON:0005730!1.10e-13!1;UBERON:0002372!1.83e-13!1;UBERON:0001961!1.83e-13!1;UBERON:0001744!1.83e-13!1;UBERON:0001735!1.83e-13!1;UBERON:0001042!6.26e-12!10;UBERON:0009145!6.26e-12!10;UBERON:0000974!1.05e-11!10;UBERON:0000078!2.25e-11!18;UBERON:0000165!4.87e-11!28;UBERON:0000930!4.87e-11!28;UBERON:0006562!6.75e-11!11;UBERON:0000161!8.11e-09!35;UBERON:0008814!3.65e-08!15;UBERON:0001004!7.16e-08!72;UBERON:0003127!1.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.16e-44;2!UBERON:0001723;1.26e-30;3!UBERON:0001033;1.26e-30;3!UBERON:0000989;2.34e-23;1!UBERON:0008811;2.34e-23;1!UBERON:0002426;3.28e-23;1!UBERON:0003831;3.28e-23;1!UBERON:0003898;3.28e-23;1!UBERON:0004830;3.28e-23;1!UBERON:0003830;3.28e-23;1!UBERON:0005175;3.28e-23;1!UBERON:0001774;3.28e-23;1!UBERON:0001103;3.28e-23;1!UBERON:0007029;4.59e-23;1!UBERON:0000974;1.82e-15;6!UBERON:0001134;4.05e-13;16!UBERON:0002036;4.05e-13;16!UBERON:0005090;2.59e-12;2!UBERON:0001630;2.59e-12;2!UBERON:0002385;2.75e-07;31!UBERON:0001015;2.75e-07;31!UBERON:0000383;2.75e-07;31!UBERON:0000014;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.65e-44,2;UBERON:0001723,1.26e-30,3;UBERON:0001033,1.26e-30,3;UBERON:0010056,1.26e-30,3;UBERON:0000989,2.10e-23,1;UBERON:0008811,2.10e-23,1;UBERON:0006258,2.10e-23,1;UBERON:0005876,2.10e-23,1;UBERON:0004874,2.10e-23,1;UBERON:0002426,3.28e-23,1;UBERON:0003831,3.28e-23,1;UBERON:0003898,3.28e-23,1;UBERON:0004830,3.28e-23,1;UBERON:0003830,3.28e-23,1;UBERON:0005175,3.28e-23,1;UBERON:0001774,3.28e-23,1;UBERON:0001103,3.28e-23,1;UBERON:0010084,3.28e-23,1;UBERON:0007029,4.10e-23,1;UBERON:0005090,2.59e-12,2;UBERON:0001630,2.59e-12,2;UBERON:0001042,6.48e-10,10;UBERON:0009145,6.48e-10,10;UBERON:0000974,1.15e-09,10;UBERON:0006562,4.25e-09,11;UBERON:0000014,9.11e-07,4 | |||
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|short_description=p2@CALML6 | |||
}} |
Revision as of 02:17, 12 September 2013
Short description: | p2@CALML6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CALML6_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 34bp_to_ENST00000482402_5end |
EntrezGene: | CALML6 |
HGNC: | 24193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.65e-44 | 2 |
tongue | 1.26e-30 | 3 |
gustatory system | 1.26e-30 | 3 |
future tongue | 1.26e-30 | 3 |
penis | 2.10e-23 | 1 |
intromittent organ | 2.10e-23 | 1 |
lateral plate mesenchyme | 2.10e-23 | 1 |
undifferentiated genital tubercle | 2.10e-23 | 1 |
somatopleure | 2.10e-23 | 1 |
chest muscle | 3.28e-23 | 1 |
respiratory system muscle | 3.28e-23 | 1 |
skeletal muscle of trunk | 3.28e-23 | 1 |
respiratory system skeletal muscle | 3.28e-23 | 1 |
thoracic segment muscle | 3.28e-23 | 1 |
chest organ | 3.28e-23 | 1 |
muscle of trunk | 3.28e-23 | 1 |
diaphragm | 3.28e-23 | 1 |
future diaphragm | 3.28e-23 | 1 |
surface | 4.10e-23 | 1 |
muscle structure | 2.59e-12 | 2 |
muscle organ | 2.59e-12 | 2 |
chordate pharynx | 6.48e-10 | 10 |
pharyngeal region of foregut | 6.48e-10 | 10 |
neck | 1.15e-09 | 10 |
pharynx | 4.25e-09 | 11 |
zone of skin | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.