FFCP PHASE1:Hg19::chr1:182361327..182361345,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2752|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4341|TSSclassifier=S|UniProt=P15104,A8YXX4|association_with_transcript=0bp_to_ENST00000311223,ENST00000331872,NM_001033044,NM_002065_5end|description=CAGE_peak_16_at_GLUL_5end|id=chr1:182361327..182361345,-|ontology_enrichment_celltype=CL:0000763!1.26e-24!112;CL:0000049!1.26e-24!112;CL:0002009!1.54e-24!65;CL:0000557!2.40e-23!71;CL:0002194!3.68e-23!63;CL:0000576!3.68e-23!63;CL:0000040!3.68e-23!63;CL:0000559!3.68e-23!63;CL:0000839!3.60e-21!70;CL:0000766!1.62e-20!76;CL:0002057!2.98e-20!42;CL:0000860!4.90e-18!45;CL:0000037!1.85e-12!172;CL:0000566!1.85e-12!172;CL:0002032!5.26e-12!165;CL:0000837!5.26e-12!165;CL:0000988!1.42e-10!182;CL:0000738!4.84e-09!140;CL:0002031!1.22e-08!124;CL:0002087!1.31e-08!119|ontology_enrichment_celltype_v019=CL:0000860;4.67e-21;33!CL:0002057;4.67e-21;33!CL:0000473;2.50e-15;39!CL:0000234;2.50e-15;39!CL:0000576;2.01e-14;48!CL:0000763;1.17e-09;100!CL:0000766;4.42e-08;69!CL:0002032;5.03e-08;1!CL:0000557;5.03e-08;1|ontology_enrichment_celltype_v019_2=CL:0000763,2.37e-18,108;CL:0000049,2.37e-18,108;CL:0000860,3.55e-17,42;CL:0002057,3.55e-17,42;CL:0000557,1.80e-16,67;CL:0002194,2.72e-16,59;CL:0000576,2.72e-16,59;CL:0000040,2.72e-16,59;CL:0000559,2.72e-16,59;CL:0002009,1.10e-15,61;CL:0000473,8.74e-15,48;CL:0000234,8.74e-15,48;CL:0000839,2.48e-14,66;CL:0000766,5.96e-13,72;CL:0002032,4.08e-11,161;CL:0000837,4.08e-11,161;CL:0000037,1.68e-10,168;CL:0000988,8.84e-10,177;CL:0002087,2.98e-07,115;CL:0002031,7.44e-07,120|ontology_enrichment_development_v019=CL:0002057;2.55e-17;42!CL:0000049;1.67e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;1.42e-09;31!DOID:225;5.03e-08;1|ontology_enrichment_disease_v019_2=DOID:8692,7.01e-10,31;DOID:225,9.29e-08,1;DOID:1240,1.11e-07,39|ontology_enrichment_uberon=UBERON:0002371!1.11e-18!80;UBERON:0002390!1.40e-16!102;UBERON:0003061!1.40e-16!102;UBERON:0001474!3.67e-16!86;UBERON:0002193!2.99e-14!112;UBERON:0002405!3.69e-13!115;UBERON:0004765!6.53e-12!101;UBERON:0001434!6.53e-12!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-14,76;UBERON:0001474,5.27e-13,82;UBERON:0004765,1.26e-11,90;UBERON:0002405,3.62e-11,93;UBERON:0002390,1.81e-10,98;UBERON:0003061,1.81e-10,98;UBERON:0001434,3.30e-10,100;UBERON:0002193,2.91e-09,108|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0.647787332037959,0.77272670290256,0.726991193897824,1.13362783106643,1.69808842831471,1.39457422143411,0.411167888021826,0.619412741790207,1.43846196161075,1.0246428261164,0.47296445977717,1.37898272294647,0.645484683583826,0,1.88242339542605,1.09162460023138,1.12361742222542,0.918251677112708,0.962787081228281,0,0,1.39624560335142,0.852449501065388,0,0.56738522469114,0,0,1.0429658368404,0.65156653411535,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0.209658645508376,0.112328631146495,0.450530678524519,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.0852266274161009,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.320472213382419,0,0.490080431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4341 | |||
|TSSclassifier=S | |||
|UniProt=P15104,A8YXX4 | |||
|association_with_transcript=0bp_to_ENST00000311223,ENST00000331872,NM_001033044,NM_002065_5end | |||
|description=CAGE_peak_16_at_GLUL_5end | |||
|id=chr1:182361327..182361345,- | |||
|ontology_enrichment_celltype=CL:0000763!1.26e-24!112;CL:0000049!1.26e-24!112;CL:0002009!1.54e-24!65;CL:0000557!2.40e-23!71;CL:0002194!3.68e-23!63;CL:0000576!3.68e-23!63;CL:0000040!3.68e-23!63;CL:0000559!3.68e-23!63;CL:0000839!3.60e-21!70;CL:0000766!1.62e-20!76;CL:0002057!2.98e-20!42;CL:0000860!4.90e-18!45;CL:0000037!1.85e-12!172;CL:0000566!1.85e-12!172;CL:0002032!5.26e-12!165;CL:0000837!5.26e-12!165;CL:0000988!1.42e-10!182;CL:0000738!4.84e-09!140;CL:0002031!1.22e-08!124;CL:0002087!1.31e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-21;33!CL:0002057;4.67e-21;33!CL:0000473;2.50e-15;39!CL:0000234;2.50e-15;39!CL:0000576;2.01e-14;48!CL:0000763;1.17e-09;100!CL:0000766;4.42e-08;69!CL:0002032;5.03e-08;1!CL:0000557;5.03e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.37e-18,108;CL:0000049,2.37e-18,108;CL:0000860,3.55e-17,42;CL:0002057,3.55e-17,42;CL:0000557,1.80e-16,67;CL:0002194,2.72e-16,59;CL:0000576,2.72e-16,59;CL:0000040,2.72e-16,59;CL:0000559,2.72e-16,59;CL:0002009,1.10e-15,61;CL:0000473,8.74e-15,48;CL:0000234,8.74e-15,48;CL:0000839,2.48e-14,66;CL:0000766,5.96e-13,72;CL:0002032,4.08e-11,161;CL:0000837,4.08e-11,161;CL:0000037,1.68e-10,168;CL:0000988,8.84e-10,177;CL:0002087,2.98e-07,115;CL:0002031,7.44e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-17;42!CL:0000049;1.67e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.42e-09;31!DOID:225;5.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.01e-10,31;DOID:225,9.29e-08,1;DOID:1240,1.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-18!80;UBERON:0002390!1.40e-16!102;UBERON:0003061!1.40e-16!102;UBERON:0001474!3.67e-16!86;UBERON:0002193!2.99e-14!112;UBERON:0002405!3.69e-13!115;UBERON:0004765!6.53e-12!101;UBERON:0001434!6.53e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-14,76;UBERON:0001474,5.27e-13,82;UBERON:0004765,1.26e-11,90;UBERON:0002405,3.62e-11,93;UBERON:0002390,1.81e-10,98;UBERON:0003061,1.81e-10,98;UBERON:0001434,3.30e-10,100;UBERON:0002193,2.91e-09,108 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0.647787332037959,0.77272670290256,0.726991193897824,1.13362783106643,1.69808842831471,1.39457422143411,0.411167888021826,0.619412741790207,1.43846196161075,1.0246428261164,0.47296445977717,1.37898272294647,0.645484683583826,0,1.88242339542605,1.09162460023138,1.12361742222542,0.918251677112708,0.962787081228281,0,0,1.39624560335142,0.852449501065388,0,0.56738522469114,0,0,1.0429658368404,0.65156653411535,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0.209658645508376,0.112328631146495,0.450530678524519,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.0852266274161009,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0.28853842595289,0,0.159426272728822,0,0,0.211673582723883,0.324621940274555,0,0.684704037099577,0.783399478865116,2.50634477090067,0.169291777801603,1.2847046008296,1.21079824314629,0,2.74804275804612,0.921722292925374,2.68411329470899,1.16794399198336,0.781552381608161,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,1.76352923497993,0,0.123084805461069,0,0,0,1.02314474045374,0.0986434056369336,0,0,0.969332746095218,0,1.99613798001194,0,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0.39669780522807,0,0,0.427149650270779,0,0,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0.327609848846413,0.245772908753719,0,0,1.06691729694141,0,0,0.368211900503681,0,0,0,0.215649622793364,0.314531883711793,0.109209638192014,0.169732529954025,0.850299680406731,0.123935764259002,1.11728983594649,0,0,0,0,0,0,0,0.159633859057151,0,1.00828678488687,0.276629009856872,0,0,0,0,0,0.115525666150338,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0.351742488719241,0.383287282918786,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0.197318320688547,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0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| |||
|short_description=p16@GLUL | |||
}} |
Revision as of 02:08, 12 September 2013
Short description: | p16@GLUL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_GLUL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311223, ENST00000331872, NM_001033044, NM_002065_5end |
EntrezGene: | GLUL |
HGNC: | 4341 |
UniProt: | P15104A8YXX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.37e-18 | 108 |
common myeloid progenitor | 2.37e-18 | 108 |
classical monocyte | 3.55e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.55e-17 | 42 |
granulocyte monocyte progenitor cell | 1.80e-16 | 67 |
monopoietic cell | 2.72e-16 | 59 |
monocyte | 2.72e-16 | 59 |
monoblast | 2.72e-16 | 59 |
promonocyte | 2.72e-16 | 59 |
macrophage dendritic cell progenitor | 1.10e-15 | 61 |
defensive cell | 8.74e-15 | 48 |
phagocyte | 8.74e-15 | 48 |
myeloid lineage restricted progenitor cell | 2.48e-14 | 66 |
myeloid leukocyte | 5.96e-13 | 72 |
hematopoietic oligopotent progenitor cell | 4.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-11 | 161 |
hematopoietic stem cell | 1.68e-10 | 168 |
hematopoietic cell | 8.84e-10 | 177 |
nongranular leukocyte | 2.98e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.44e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.15e-14 | 76 |
bone element | 5.27e-13 | 82 |
skeletal element | 1.26e-11 | 90 |
immune system | 3.62e-11 | 93 |
hematopoietic system | 1.81e-10 | 98 |
blood island | 1.81e-10 | 98 |
skeletal system | 3.30e-10 | 100 |
hemolymphoid system | 2.91e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.01e-10 | 31 |
syndrome | 9.29e-08 | 1 |
leukemia | 1.11e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.