FFCP PHASE1:Hg19::chr1:177001748..177001753,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=460|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=773|TSSclassifier=S|UniProt=|association_with_transcript=-62bp_to_ENST00000473640_5end|coexpression_cluster_id=C16|description=CAGE_peak_16_at_ASTN1_5end|id=chr1:177001748..177001753,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!7.59e-54!34;UBERON:0001869!9.95e-51!32;UBERON:0002780!5.53e-50!41;UBERON:0001890!5.53e-50!41;UBERON:0006240!5.53e-50!41;UBERON:0002791!3.92e-49!33;UBERON:0002619!9.65e-49!22;UBERON:0003080!9.66e-49!42;UBERON:0001950!1.39e-45!20;UBERON:0001049!5.01e-44!57;UBERON:0005068!5.01e-44!57;UBERON:0006241!5.01e-44!57;UBERON:0007135!5.01e-44!57;UBERON:0000956!7.64e-43!25;UBERON:0000203!7.64e-43!25;UBERON:0002020!7.63e-42!34;UBERON:0003528!7.63e-42!34;UBERON:0002616!5.51e-38!59;UBERON:0000955!3.80e-35!69;UBERON:0006238!3.80e-35!69;UBERON:0003056!9.54e-33!61;UBERON:0001017!1.96e-32!82;UBERON:0005743!8.84e-31!86;UBERON:0002346!1.02e-29!90;UBERON:0003075!4.39e-28!86;UBERON:0007284!4.39e-28!86;UBERON:0000073!1.48e-27!94;UBERON:0001016!1.48e-27!94;UBERON:0001872!1.44e-22!5;UBERON:0001871!2.69e-22!7;UBERON:0000033!1.88e-20!123;UBERON:0007023!4.81e-20!115;UBERON:0000153!2.49e-19!129;UBERON:0007811!2.49e-19!129;UBERON:0000200!1.19e-18!6;UBERON:0000924!5.69e-15!173;UBERON:0006601!5.69e-15!173;UBERON:0004121!8.76e-14!169;UBERON:0002771!1.70e-10!3;UBERON:0000025!2.21e-10!194;UBERON:0005383!2.98e-10!3;UBERON:0005382!2.98e-10!3;UBERON:0000477!1.79e-08!286;UBERON:0003112!2.02e-08!1;UBERON:0000032!2.02e-08!1;UBERON:0005253!2.02e-08!1;UBERON:0003128!2.02e-08!1;UBERON:0002241!2.02e-08!1;UBERON:0001703!2.02e-08!1;UBERON:0004761!2.02e-08!1;UBERON:0009617!2.02e-08!1;UBERON:0001874!2.17e-08!1;UBERON:0007190!4.72e-08!1;UBERON:0002336!5.07e-08!1;UBERON:0001018!5.07e-08!1;UBERON:0002473!5.07e-08!1;UBERON:0005340!5.07e-08!1;UBERON:0002316!5.07e-08!1;UBERON:0003544!5.07e-08!1;UBERON:0001020!5.07e-08!1;UBERON:0005970!5.07e-08!1;UBERON:0002437!5.07e-08!1;UBERON:0002581!5.43e-08!1;UBERON:0000369!6.71e-08!4;UBERON:0002435!6.71e-08!4;UBERON:0000204!6.71e-08!4;UBERON:0010082!6.71e-08!4;UBERON:0002022!7.16e-08!1;UBERON:0000064!1.22e-07!219;UBERON:0002420!1.28e-07!9;UBERON:0007245!1.28e-07!9;UBERON:0010009!1.28e-07!9;UBERON:0010011!1.28e-07!9;UBERON:0000454!1.28e-07!9;UBERON:0004111!1.30e-07!241|ontology_enrichment_uberon_v019=UBERON:0001871;4.76e-57;6!UBERON:0002771;3.52e-50;2!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000200;8.34e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0001893;1.90e-14;34!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0003528;1.70e-11;34!UBERON:0002020;1.70e-11;34!UBERON:0001017;8.55e-09;75!UBERON:0000955;3.42e-07;68!UBERON:0000073;7.94e-07;53!UBERON:0002616;7.94e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0001871,4.76e-57,6;UBERON:0002771,2.74e-50,2;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.2342644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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=460 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=773 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-62bp_to_ENST00000473640_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_16_at_ASTN1_5end | |||
|id=chr1:177001748..177001753,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.59e-54!34;UBERON:0001869!9.95e-51!32;UBERON:0002780!5.53e-50!41;UBERON:0001890!5.53e-50!41;UBERON:0006240!5.53e-50!41;UBERON:0002791!3.92e-49!33;UBERON:0002619!9.65e-49!22;UBERON:0003080!9.66e-49!42;UBERON:0001950!1.39e-45!20;UBERON:0001049!5.01e-44!57;UBERON:0005068!5.01e-44!57;UBERON:0006241!5.01e-44!57;UBERON:0007135!5.01e-44!57;UBERON:0000956!7.64e-43!25;UBERON:0000203!7.64e-43!25;UBERON:0002020!7.63e-42!34;UBERON:0003528!7.63e-42!34;UBERON:0002616!5.51e-38!59;UBERON:0000955!3.80e-35!69;UBERON:0006238!3.80e-35!69;UBERON:0003056!9.54e-33!61;UBERON:0001017!1.96e-32!82;UBERON:0005743!8.84e-31!86;UBERON:0002346!1.02e-29!90;UBERON:0003075!4.39e-28!86;UBERON:0007284!4.39e-28!86;UBERON:0000073!1.48e-27!94;UBERON:0001016!1.48e-27!94;UBERON:0001872!1.44e-22!5;UBERON:0001871!2.69e-22!7;UBERON:0000033!1.88e-20!123;UBERON:0007023!4.81e-20!115;UBERON:0000153!2.49e-19!129;UBERON:0007811!2.49e-19!129;UBERON:0000200!1.19e-18!6;UBERON:0000924!5.69e-15!173;UBERON:0006601!5.69e-15!173;UBERON:0004121!8.76e-14!169;UBERON:0002771!1.70e-10!3;UBERON:0000025!2.21e-10!194;UBERON:0005383!2.98e-10!3;UBERON:0005382!2.98e-10!3;UBERON:0000477!1.79e-08!286;UBERON:0003112!2.02e-08!1;UBERON:0000032!2.02e-08!1;UBERON:0005253!2.02e-08!1;UBERON:0003128!2.02e-08!1;UBERON:0002241!2.02e-08!1;UBERON:0001703!2.02e-08!1;UBERON:0004761!2.02e-08!1;UBERON:0009617!2.02e-08!1;UBERON:0001874!2.17e-08!1;UBERON:0007190!4.72e-08!1;UBERON:0002336!5.07e-08!1;UBERON:0001018!5.07e-08!1;UBERON:0002473!5.07e-08!1;UBERON:0005340!5.07e-08!1;UBERON:0002316!5.07e-08!1;UBERON:0003544!5.07e-08!1;UBERON:0001020!5.07e-08!1;UBERON:0005970!5.07e-08!1;UBERON:0002437!5.07e-08!1;UBERON:0002581!5.43e-08!1;UBERON:0000369!6.71e-08!4;UBERON:0002435!6.71e-08!4;UBERON:0000204!6.71e-08!4;UBERON:0010082!6.71e-08!4;UBERON:0002022!7.16e-08!1;UBERON:0000064!1.22e-07!219;UBERON:0002420!1.28e-07!9;UBERON:0007245!1.28e-07!9;UBERON:0010009!1.28e-07!9;UBERON:0010011!1.28e-07!9;UBERON:0000454!1.28e-07!9;UBERON:0004111!1.30e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;4.76e-57;6!UBERON:0002771;3.52e-50;2!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000200;8.34e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0001893;1.90e-14;34!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0003528;1.70e-11;34!UBERON:0002020;1.70e-11;34!UBERON:0001017;8.55e-09;75!UBERON:0000955;3.42e-07;68!UBERON:0000073;7.94e-07;53!UBERON:0002616;7.94e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,4.76e-57,6;UBERON:0002771,2.74e-50,2;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p16@ASTN1 | |||
}} |
Revision as of 01:58, 12 September 2013
Short description: | p16@ASTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ASTN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -62bp_to_ENST00000473640_5end |
EntrezGene: | ASTN1 |
HGNC: | 773 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 4.76e-57 | 6 |
middle temporal gyrus | 2.74e-50 | 2 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.