FFCP PHASE1:Hg19::chr1:156933561..156933592,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9826|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14580|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_ENST00000486670_5end|coexpression_cluster_id=C2|description=CAGE_peak_4_at_ARHGEF11_5end|id=chr1:156933561..156933592,-|ontology_enrichment_celltype=CL:0000738!4.93e-58!140;CL:0002087!6.27e-57!119;CL:0000037!1.61e-47!172;CL:0000566!1.61e-47!172;CL:0002031!3.55e-47!124;CL:0002032!3.73e-46!165;CL:0000837!3.73e-46!165;CL:0000988!2.31e-43!182;CL:0000766!1.06e-41!76;CL:0002194!1.57e-39!63;CL:0000576!1.57e-39!63;CL:0000040!1.57e-39!63;CL:0000559!1.57e-39!63;CL:0002057!7.65e-39!42;CL:0002009!1.37e-37!65;CL:0000860!5.89e-35!45;CL:0000839!3.09e-33!70;CL:0000557!1.92e-32!71;CL:0000763!9.65e-29!112;CL:0000049!9.65e-29!112;CL:0000542!2.39e-15!53;CL:0000051!2.39e-15!53;CL:0000838!8.80e-15!52;CL:0000134!9.87e-11!358;CL:0002320!7.39e-10!365;CL:0002393!2.55e-08!9;CL:0002397!2.55e-08!9;CL:0000084!2.95e-08!25;CL:0000827!2.95e-08!25;CL:0000236!3.48e-08!14;CL:0000094!3.65e-08!8;CL:0000219!4.33e-08!390;CL:0000791!7.84e-08!18;CL:0000789!7.84e-08!18;CL:0002420!7.84e-08!18;CL:0002419!7.84e-08!18;CL:0000790!7.84e-08!18;CL:0000945!5.25e-07!24;CL:0000826!5.25e-07!24|ontology_enrichment_celltype_v019=CL:0000860;6.10e-52;33!CL:0002057;6.10e-52;33!CL:0000473;1.83e-49;39!CL:0000234;1.83e-49;39!CL:0000576;5.10e-42;48!CL:0000766;2.52e-31;69!CL:0002087;7.50e-19;104!CL:0000738;1.47e-17;136!CL:0000763;1.07e-15;100!CL:0000094;4.64e-11;8!CL:0000988;5.74e-10;177!CL:0000235;3.18e-08;6!CL:0000081;1.10e-07;11!CL:0000219;1.33e-07;193!CL:0000775;2.22e-07;3!CL:0002393;5.16e-07;6!CL:0002397;5.16e-07;6|ontology_enrichment_celltype_v019_2=CL:0000766,1.16e-77,72;CL:0002194,2.27e-74,59;CL:0000576,2.27e-74,59;CL:0000040,2.27e-74,59;CL:0000559,2.27e-74,59;CL:0000473,4.22e-74,48;CL:0000234,4.22e-74,48;CL:0002009,2.05e-71,61;CL:0000738,8.63e-71,136;CL:0002087,2.14e-68,115;CL:0000860,3.90e-67,42;CL:0002057,3.90e-67,42;CL:0000839,8.40e-65,66;CL:0000557,1.35e-63,67;CL:0002031,1.00e-58,120;CL:0000037,4.52e-56,168;CL:0002032,2.50e-54,161;CL:0000837,2.50e-54,161;CL:0000988,4.84e-52,177;CL:0000763,2.90e-49,108;CL:0000049,2.90e-49,108;CL:0000134,8.94e-15,354;CL:0002320,4.48e-14,361;CL:0000219,1.23e-11,386;CL:0002393,2.41e-11,9;CL:0002397,2.41e-11,9;CL:0000094,5.83e-11,8;CL:0000048,9.94e-09,427;CL:0000723,2.45e-08,433;CL:0000235,3.17e-08,6;CL:0000034,7.81e-08,441;CL:0000081,1.29e-07,11;CL:0000775,2.20e-07,3;CL:0000542,5.89e-07,53;CL:0000051,5.89e-07,53|ontology_enrichment_development_v019=CL:0002057;2.83e-47;42!CL:0000049;1.63e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.09e-40!112;UBERON:0002390!6.83e-40!102;UBERON:0003061!6.83e-40!102;UBERON:0002371!2.66e-27!80;UBERON:0002405!1.01e-26!115;UBERON:0001474!7.71e-24!86;UBERON:0004765!6.21e-18!101;UBERON:0001434!6.21e-18!101;UBERON:0003081!2.25e-11!216;UBERON:0000178!2.45e-09!15;UBERON:0000179!2.45e-09!15;UBERON:0000463!2.45e-09!15;UBERON:0002384!4.15e-09!375;UBERON:0007023!4.97e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-14;15!UBERON:0000179;1.05e-14;15!UBERON:0000463;1.05e-14;15!UBERON:0002390;4.33e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.22e-71,98;UBERON:0003061,2.22e-71,98;UBERON:0002193,6.03e-65,108;UBERON:0002371,3.59e-54,76;UBERON:0002405,1.63e-50,93;UBERON:0001474,4.92e-49,82;UBERON:0004765,2.99e-43,90;UBERON:0001434,2.50e-37,100;UBERON:0003081,3.62e-25,203;UBERON:0002204,3.26e-16,167;UBERON:0000178,9.42e-15,15;UBERON:0000179,9.42e-15,15;UBERON:0000463,9.42e-15,15;UBERON:0002384,9.85e-14,371;UBERON:0000926,9.70e-10,315;UBERON:0004120,9.70e-10,315;UBERON:0006603,9.70e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.18009283054671,0.767658796194425,1.23852898652861,0,0,0,1.93668001450754,0.710846162437108,0,1.66198622559563,2.00544447470142,0.868043482863407,12.0914356089559,6.47787332037959,7.7272670290256,9.74168199823083,6.42389104270976,6.79235371325885,7.20530014407622,8.22335776043652,6.50383378879718,7.76769459269806,13.3203567395132,7.56743135643473,2.75796544589295,5.16387746867061,4.06279459783025,7.71793592124679,9.82462140208245,4.26974620445661,12.8555234795779,14.7627352455003,10.2293940127847,6.59702600373432,12.5662104301628,6.81959600852311,22.346111374401,11.9150897185139,18.0618452208717,10.80369260604,11.4726242052444,6.73285418585862,29.0591761264017,29.0939332430176,16.1395817594851,5.70389273042243,4.25208599930087,3.56419697364239,4.83013113929929,4.8056605709282,3.69668849403284,4.27519115611873,4.77400025277816,5.29726045917438,1.75996244461323,2.18455444504853,0.889509253863555,2.13365111283254,0.400395987036012,2.29900975981793,1.32208974556972,0.954053754535364,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.983548850569165,0.393010762749165,0.616804496998528,5.51715434789238,0.6518445332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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000486670_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_ARHGEF11_5end | |||
|id=chr1:156933561..156933592,- | |||
|ontology_enrichment_celltype=CL:0000738!4.93e-58!140;CL:0002087!6.27e-57!119;CL:0000037!1.61e-47!172;CL:0000566!1.61e-47!172;CL:0002031!3.55e-47!124;CL:0002032!3.73e-46!165;CL:0000837!3.73e-46!165;CL:0000988!2.31e-43!182;CL:0000766!1.06e-41!76;CL:0002194!1.57e-39!63;CL:0000576!1.57e-39!63;CL:0000040!1.57e-39!63;CL:0000559!1.57e-39!63;CL:0002057!7.65e-39!42;CL:0002009!1.37e-37!65;CL:0000860!5.89e-35!45;CL:0000839!3.09e-33!70;CL:0000557!1.92e-32!71;CL:0000763!9.65e-29!112;CL:0000049!9.65e-29!112;CL:0000542!2.39e-15!53;CL:0000051!2.39e-15!53;CL:0000838!8.80e-15!52;CL:0000134!9.87e-11!358;CL:0002320!7.39e-10!365;CL:0002393!2.55e-08!9;CL:0002397!2.55e-08!9;CL:0000084!2.95e-08!25;CL:0000827!2.95e-08!25;CL:0000236!3.48e-08!14;CL:0000094!3.65e-08!8;CL:0000219!4.33e-08!390;CL:0000791!7.84e-08!18;CL:0000789!7.84e-08!18;CL:0002420!7.84e-08!18;CL:0002419!7.84e-08!18;CL:0000790!7.84e-08!18;CL:0000945!5.25e-07!24;CL:0000826!5.25e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-52;33!CL:0002057;6.10e-52;33!CL:0000473;1.83e-49;39!CL:0000234;1.83e-49;39!CL:0000576;5.10e-42;48!CL:0000766;2.52e-31;69!CL:0002087;7.50e-19;104!CL:0000738;1.47e-17;136!CL:0000763;1.07e-15;100!CL:0000094;4.64e-11;8!CL:0000988;5.74e-10;177!CL:0000235;3.18e-08;6!CL:0000081;1.10e-07;11!CL:0000219;1.33e-07;193!CL:0000775;2.22e-07;3!CL:0002393;5.16e-07;6!CL:0002397;5.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.16e-77,72;CL:0002194,2.27e-74,59;CL:0000576,2.27e-74,59;CL:0000040,2.27e-74,59;CL:0000559,2.27e-74,59;CL:0000473,4.22e-74,48;CL:0000234,4.22e-74,48;CL:0002009,2.05e-71,61;CL:0000738,8.63e-71,136;CL:0002087,2.14e-68,115;CL:0000860,3.90e-67,42;CL:0002057,3.90e-67,42;CL:0000839,8.40e-65,66;CL:0000557,1.35e-63,67;CL:0002031,1.00e-58,120;CL:0000037,4.52e-56,168;CL:0002032,2.50e-54,161;CL:0000837,2.50e-54,161;CL:0000988,4.84e-52,177;CL:0000763,2.90e-49,108;CL:0000049,2.90e-49,108;CL:0000134,8.94e-15,354;CL:0002320,4.48e-14,361;CL:0000219,1.23e-11,386;CL:0002393,2.41e-11,9;CL:0002397,2.41e-11,9;CL:0000094,5.83e-11,8;CL:0000048,9.94e-09,427;CL:0000723,2.45e-08,433;CL:0000235,3.17e-08,6;CL:0000034,7.81e-08,441;CL:0000081,1.29e-07,11;CL:0000775,2.20e-07,3;CL:0000542,5.89e-07,53;CL:0000051,5.89e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-47;42!CL:0000049;1.63e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-40!112;UBERON:0002390!6.83e-40!102;UBERON:0003061!6.83e-40!102;UBERON:0002371!2.66e-27!80;UBERON:0002405!1.01e-26!115;UBERON:0001474!7.71e-24!86;UBERON:0004765!6.21e-18!101;UBERON:0001434!6.21e-18!101;UBERON:0003081!2.25e-11!216;UBERON:0000178!2.45e-09!15;UBERON:0000179!2.45e-09!15;UBERON:0000463!2.45e-09!15;UBERON:0002384!4.15e-09!375;UBERON:0007023!4.97e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-14;15!UBERON:0000179;1.05e-14;15!UBERON:0000463;1.05e-14;15!UBERON:0002390;4.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.22e-71,98;UBERON:0003061,2.22e-71,98;UBERON:0002193,6.03e-65,108;UBERON:0002371,3.59e-54,76;UBERON:0002405,1.63e-50,93;UBERON:0001474,4.92e-49,82;UBERON:0004765,2.99e-43,90;UBERON:0001434,2.50e-37,100;UBERON:0003081,3.62e-25,203;UBERON:0002204,3.26e-16,167;UBERON:0000178,9.42e-15,15;UBERON:0000179,9.42e-15,15;UBERON:0000463,9.42e-15,15;UBERON:0002384,9.85e-14,371;UBERON:0000926,9.70e-10,315;UBERON:0004120,9.70e-10,315;UBERON:0006603,9.70e-10,315 | |||
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| |||
|short_description=p4@ARHGEF11 | |||
}} |
Revision as of 00:58, 12 September 2013
Short description: | p4@ARHGEF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGEF11_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -3bp_to_ENST00000486670_5end |
EntrezGene: | ARHGEF11 |
HGNC: | 14580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.22e-71 | 98 |
blood island | 2.22e-71 | 98 |
hemolymphoid system | 6.03e-65 | 108 |
bone marrow | 3.59e-54 | 76 |
immune system | 1.63e-50 | 93 |
bone element | 4.92e-49 | 82 |
skeletal element | 2.99e-43 | 90 |
skeletal system | 2.50e-37 | 100 |
lateral plate mesoderm | 3.62e-25 | 203 |
musculoskeletal system | 3.26e-16 | 167 |
blood | 9.42e-15 | 15 |
haemolymphatic fluid | 9.42e-15 | 15 |
organism substance | 9.42e-15 | 15 |
connective tissue | 9.85e-14 | 371 |
mesoderm | 9.70e-10 | 315 |
mesoderm-derived structure | 9.70e-10 | 315 |
presumptive mesoderm | 9.70e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.