FFCP PHASE1:Hg19::chr1:114471972..114472000,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=204851|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19006|TSSclassifier=S|UniProt=Q5SQL3,Q86Z02,B4DZ33|association_with_transcript=0bp_to_ENST00000369554,ENST00000369559,ENST00000443627,NM_152696,NM_198268,uc001eel.2,uc001eem.2_5end|coexpression_cluster_id=C1768|description=CAGE_peak_3_at_HIPK1_5end|id=chr1:114471972..114472000,+|ontology_enrichment_celltype=CL:0002057!4.14e-22!42;CL:0000766!8.35e-22!76;CL:0000738!1.66e-21!140;CL:0000860!1.92e-21!45;CL:0000839!3.45e-19!70;CL:0000557!9.64e-19!71;CL:0002031!1.04e-17!124;CL:0002009!7.60e-17!65;CL:0002194!1.92e-15!63;CL:0000576!1.92e-15!63;CL:0000040!1.92e-15!63;CL:0000559!1.92e-15!63;CL:0000037!7.18e-15!172;CL:0000566!7.18e-15!172;CL:0002087!1.41e-14!119;CL:0000763!2.97e-14!112;CL:0000049!2.97e-14!112;CL:0002032!6.02e-14!165;CL:0000837!6.02e-14!165;CL:0000988!6.03e-13!182|ontology_enrichment_celltype_v019=CL:0000860;9.96e-37;33!CL:0002057;9.96e-37;33!CL:0000473;1.82e-27;39!CL:0000234;1.82e-27;39!CL:0000576;2.75e-21;48!CL:0000766;9.32e-17;69!CL:0000624;2.39e-15;6!CL:0002087;1.52e-13;104!CL:0000738;1.68e-10;136!CL:0000791;2.48e-10;18!CL:0000789;2.48e-10;18!CL:0002419;2.48e-10;18!CL:0000094;4.91e-10;8!CL:0000763;5.80e-10;100!CL:0000623;5.42e-09;3!CL:0000898;5.52e-08;3!CL:0000767;7.71e-08;3!CL:0000081;4.28e-07;11!CL:0000084;6.74e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,7.82e-46,136;CL:0002031,1.79e-41,120;CL:0000860,4.25e-40,42;CL:0002057,4.25e-40,42;CL:0000766,9.19e-39,72;CL:0000037,2.51e-37,168;CL:0000473,1.65e-36,48;CL:0000234,1.65e-36,48;CL:0002032,3.58e-36,161;CL:0000837,3.58e-36,161;CL:0000988,1.25e-34,177;CL:0002087,1.62e-34,115;CL:0000839,8.54e-34,66;CL:0000557,2.13e-33,67;CL:0002009,7.77e-31,61;CL:0000763,8.60e-29,108;CL:0000049,8.60e-29,108;CL:0002194,1.88e-27,59;CL:0000576,1.88e-27,59;CL:0000040,1.88e-27,59;CL:0000559,1.88e-27,59;CL:0000624,2.89e-15,6;CL:0000134,1.66e-11,354;CL:0002320,5.45e-11,361;CL:0000791,2.72e-10,18;CL:0000789,2.72e-10,18;CL:0002420,2.72e-10,18;CL:0002419,2.72e-10,18;CL:0000790,2.72e-10,18;CL:0000094,3.55e-10,8;CL:0000219,9.89e-10,386;CL:0000623,5.44e-09,3;CL:0000825,5.44e-09,3;CL:0000767,5.61e-08,3;CL:0000898,6.63e-08,3;CL:0000034,8.25e-08,441;CL:0000838,1.37e-07,52;CL:0000048,1.72e-07,427;CL:0000542,2.24e-07,53;CL:0000051,2.24e-07,53;CL:0000081,3.41e-07,11;CL:0000723,3.47e-07,433;CL:0000084,7.16e-07,25;CL:0000827,7.16e-07,25|ontology_enrichment_development_v019=CL:0002057;5.62e-29;42!CL:0000790;2.48e-10;18!UBERON:0006215;1.34e-07;3!CL:0000049;8.32e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.42e-21!102;UBERON:0003061!4.42e-21!102;UBERON:0002193!1.12e-17!112;UBERON:0002371!3.34e-15!80;UBERON:0001474!5.00e-14!86;UBERON:0002405!1.20e-11!115;UBERON:0004765!2.55e-11!101;UBERON:0001434!2.55e-11!101;UBERON:0007023!2.80e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.64e-31,98;UBERON:0003061,4.64e-31,98;UBERON:0002371,2.59e-28,76;UBERON:0002193,3.97e-27,108;UBERON:0001474,1.52e-25,82;UBERON:0002405,5.15e-23,93;UBERON:0004765,1.98e-22,90;UBERON:0001434,3.01e-19,100;UBERON:0002384,7.12e-11,371;UBERON:0003081,9.87e-11,203;UBERON:0002204,1.16e-08,167|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,3.83829398097213,3.71558695958582,0,0,0,0.232401601740905,0,0,3.32397245119126,7.2196001089251,12.3696196308036,0,0.32389366601898,0,2.32637182047304,1.13362783106643,1.69808842831471,2.32429036905685,0.411167888021826,1.54853185447552,1.7261543539329,4.09857130446561,3.31075121844019,5.17118521104928,1.93645405075148,0,2.25890807451126,1.09162460023138,1.57306439111559,3.97909060082173,2.56743221660875,5.11469700639233,1.31940520074686,0.997318288108159,1.70489900213078,3.48251086354301,0.56738522469114,2.4912889959823,1.7587406567972,3.12889751052121,2.38907729175628,3.02699751316684,2.94622108790052,2.21523671208619,0,0,0.209658645508376,0,0.450530678524519,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,1.70763890732835,5.28513470433845,3.05818582500183,1.32171328579026,5.60508562981536,0.526768169550154,25.965689655026,25.1526888159465,10.896879446974,0,4.56291173287027,1.4203434172042,1.94826728407911,0,1.17842362989935,0.886135578334485,0.812411591295047,0,0.130059347559878,0,0,0.289803085735052,2.66915813691709,0.535081656179426,0,0,4.21542542962113,1.71813722741315,2.27717722817553,0,0,0,0,0.127986611154418,0,0,0,20.1606743224732,17.918493117495,25.923568295021,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,8.51363990735132,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0.354668382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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=204851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19006 | |||
|TSSclassifier=S | |||
|UniProt=Q5SQL3,Q86Z02,B4DZ33 | |||
|association_with_transcript=0bp_to_ENST00000369554,ENST00000369559,ENST00000443627,NM_152696,NM_198268,uc001eel.2,uc001eem.2_5end | |||
|coexpression_cluster_id=C1768 | |||
|description=CAGE_peak_3_at_HIPK1_5end | |||
|id=chr1:114471972..114472000,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.14e-22!42;CL:0000766!8.35e-22!76;CL:0000738!1.66e-21!140;CL:0000860!1.92e-21!45;CL:0000839!3.45e-19!70;CL:0000557!9.64e-19!71;CL:0002031!1.04e-17!124;CL:0002009!7.60e-17!65;CL:0002194!1.92e-15!63;CL:0000576!1.92e-15!63;CL:0000040!1.92e-15!63;CL:0000559!1.92e-15!63;CL:0000037!7.18e-15!172;CL:0000566!7.18e-15!172;CL:0002087!1.41e-14!119;CL:0000763!2.97e-14!112;CL:0000049!2.97e-14!112;CL:0002032!6.02e-14!165;CL:0000837!6.02e-14!165;CL:0000988!6.03e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.96e-37;33!CL:0002057;9.96e-37;33!CL:0000473;1.82e-27;39!CL:0000234;1.82e-27;39!CL:0000576;2.75e-21;48!CL:0000766;9.32e-17;69!CL:0000624;2.39e-15;6!CL:0002087;1.52e-13;104!CL:0000738;1.68e-10;136!CL:0000791;2.48e-10;18!CL:0000789;2.48e-10;18!CL:0002419;2.48e-10;18!CL:0000094;4.91e-10;8!CL:0000763;5.80e-10;100!CL:0000623;5.42e-09;3!CL:0000898;5.52e-08;3!CL:0000767;7.71e-08;3!CL:0000081;4.28e-07;11!CL:0000084;6.74e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.82e-46,136;CL:0002031,1.79e-41,120;CL:0000860,4.25e-40,42;CL:0002057,4.25e-40,42;CL:0000766,9.19e-39,72;CL:0000037,2.51e-37,168;CL:0000473,1.65e-36,48;CL:0000234,1.65e-36,48;CL:0002032,3.58e-36,161;CL:0000837,3.58e-36,161;CL:0000988,1.25e-34,177;CL:0002087,1.62e-34,115;CL:0000839,8.54e-34,66;CL:0000557,2.13e-33,67;CL:0002009,7.77e-31,61;CL:0000763,8.60e-29,108;CL:0000049,8.60e-29,108;CL:0002194,1.88e-27,59;CL:0000576,1.88e-27,59;CL:0000040,1.88e-27,59;CL:0000559,1.88e-27,59;CL:0000624,2.89e-15,6;CL:0000134,1.66e-11,354;CL:0002320,5.45e-11,361;CL:0000791,2.72e-10,18;CL:0000789,2.72e-10,18;CL:0002420,2.72e-10,18;CL:0002419,2.72e-10,18;CL:0000790,2.72e-10,18;CL:0000094,3.55e-10,8;CL:0000219,9.89e-10,386;CL:0000623,5.44e-09,3;CL:0000825,5.44e-09,3;CL:0000767,5.61e-08,3;CL:0000898,6.63e-08,3;CL:0000034,8.25e-08,441;CL:0000838,1.37e-07,52;CL:0000048,1.72e-07,427;CL:0000542,2.24e-07,53;CL:0000051,2.24e-07,53;CL:0000081,3.41e-07,11;CL:0000723,3.47e-07,433;CL:0000084,7.16e-07,25;CL:0000827,7.16e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-29;42!CL:0000790;2.48e-10;18!UBERON:0006215;1.34e-07;3!CL:0000049;8.32e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.42e-21!102;UBERON:0003061!4.42e-21!102;UBERON:0002193!1.12e-17!112;UBERON:0002371!3.34e-15!80;UBERON:0001474!5.00e-14!86;UBERON:0002405!1.20e-11!115;UBERON:0004765!2.55e-11!101;UBERON:0001434!2.55e-11!101;UBERON:0007023!2.80e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.64e-31,98;UBERON:0003061,4.64e-31,98;UBERON:0002371,2.59e-28,76;UBERON:0002193,3.97e-27,108;UBERON:0001474,1.52e-25,82;UBERON:0002405,5.15e-23,93;UBERON:0004765,1.98e-22,90;UBERON:0001434,3.01e-19,100;UBERON:0002384,7.12e-11,371;UBERON:0003081,9.87e-11,203;UBERON:0002204,1.16e-08,167 | |||
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| |||
|short_description=p3@HIPK1 | |||
}} |
Revision as of 23:38, 11 September 2013
Short description: | p3@HIPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HIPK1_5end |
Coexpression cluster: | C1768_testis_CD8_Natural_embryonic_Eosinophils_CD4_CD14 |
Association with transcript: | 0bp_to_ENST00000369554, ENST00000369559, ENST00000443627, NM_152696, NM_198268, uc001eel.2, uc001eem.2_5end |
EntrezGene: | HIPK1 |
HGNC: | 19006 |
UniProt: | Q5SQL3Q86Z02B4DZ33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.64e-31 | 98 |
blood island | 4.64e-31 | 98 |
bone marrow | 2.59e-28 | 76 |
hemolymphoid system | 3.97e-27 | 108 |
bone element | 1.52e-25 | 82 |
immune system | 5.15e-23 | 93 |
skeletal element | 1.98e-22 | 90 |
skeletal system | 3.01e-19 | 100 |
connective tissue | 7.12e-11 | 371 |
lateral plate mesoderm | 9.87e-11 | 203 |
musculoskeletal system | 1.16e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.