FFCP PHASE1:Hg19::chr1:110453109..110453144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1435|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2432|TSSclassifier=S|UniProt=E9PKP4|association_with_transcript=0bp_to_ENST00000525659_5end|description=CAGE_peak_5_at_CSF1_5end|id=chr1:110453109..110453144,+|ontology_enrichment_celltype=CL:0000222!1.97e-07!119|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000048,4.69e-08,427;CL:0000723,1.14e-07,433;CL:0000766,1.27e-07,72;CL:0000034,1.40e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.12e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.21e-07,203;UBERON:0002371,9.59e-07,76|phase1_expression=0.181678379270557,0.642301571672949,0.845726424575827,1.0007329835313,0.446961094427288,0,2.53299878168311,0,1.30592814099919,0,1.39560233594486,0,0,0.990130823680373,0.662794751455832,2.01697543935533,1.80808358407193,0,0.487932798790507,0.123121058076788,0.612002073732759,0,0.572471974262113,0.273748850145768,0.251085279189606,1.98674854944673,1.39571002064908,0.944529375764151,0.786728553697808,0.383829398097213,0.464448369948228,0,0.30120591877825,0.739508020333575,0,0,0,1.10799081706375,1.00272223735071,0.868043482863407,0,0.32389366601898,0,0,0,0,0.929716147622738,2.05583944010913,0.309706370895104,0.575384784644301,1.7931249457037,0.709446689665756,1.72372840368309,1.29096936716765,1.35426486594342,0.376484679085209,0,0.449446968890169,1.53041946185451,0.320929027076094,0,0,0,0,0.870627715885752,1.70215567407342,0,1.00499466102697,0.521482918420201,1.95469960234605,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0.411202997999018,1.67186495390678,0,0,0,3.45372416344038,0.294605907474837,0,0.270803863765016,2.0494611156108,3.51160238411671,0.657751618414705,0.829050053357545,0.289803085735052,0,0,0,0.906474741580529,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0.383587685530591,0.722878304769133,0,0.579386075843295,0.795285947051099,0,0.378139268656271,0.221729397462564,0.175669571386252,0.261958150995425,0.364295288292542,0.370784442784429,1.9472843619281,2.26368658489047,1.99436940778298,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.835979866147242,0,0,1.00416183829401,0.805658634218294,0.760272105718513,0.732186172644509,0,0.81014194788176,0.267899184852239,0,0.225222960966644,1.53316637465883,0,0,2.63560834872127,3.87780264148325,0.436094052142534,0,0.25326102332916,1.72131935057184,0.860509862246441,1.77334191099179,0,1.06748995729705,0.98667019366864,0,0.942974704487816,0.490385709340376,0.454072282934794,0,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0.161872944368132,0.280901613404497,0.61246251376468,0,0.619954687054593,0,0.989067717114227,0.910161361938026,2.87447256726495,0.336672227908132,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0.453728732640084,0.358779271377724,0.427114777637135,0.635795703478686,0.300091096084402,0.309157587715317,0.772921620136887,0,1.0126579934476,0.68205903612839,0.252433774244115,0.368199594569197,0.969876340912871,1.06502877754984,0.201504196455281,0.508681776931463,0,0.818238361772504,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,7.8224766164908,1.92972281457866,0,0.928735856063958,0,0,0,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,1.40241773803446,0.8231480226628,0,0,1.96565443335525,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,1.03993478527958,0,0.231860809950154,0.117408694235822,1.01056513432752,0.462985512576611,0.761016608938393,0,0,0.246217006087397,2.80805118167085,1.33768046059855,0,0.671928512795438,0.141775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0.088048434013226,6.01251535068239,7.63835753109896,4.4184851699233,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0.1466765716419,1.42198887333556,0,1.690605505112,0.531876233169741,2.08014873822732,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,1.64648067356154,1.30294473717494,0,0,1.50719688529793,0.871533458600294,1.59956785891291,1.2162378064119,0.502257091432126,4.21667878966063,0,2.29723871668228,0,1.01346914667305,0.410952645100767,1.43248770591916,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0.749007023947182,2.99161459204025,0,0.49076596687656,0.500170521059677,0.813795071099207,0.623912584592421,0.356857977594324,0,0.117141414992713,0.601892199455438,0,1.03473071292505,0.664225598535437,0,0.868836144680828,0.783204629850962,0.343143423810856,0,0.431428401637234,0.213455115606889,0,0,0,0.496215615637554,1.99500565274481,1.12264037773229,0,0.511707249066704,0.64341568457443,2.96836132889982,0.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1435 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2432 | |||
|TSSclassifier=S | |||
|UniProt=E9PKP4 | |||
|association_with_transcript=0bp_to_ENST00000525659_5end | |||
|description=CAGE_peak_5_at_CSF1_5end | |||
|id=chr1:110453109..110453144,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.97e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.69e-08,427;CL:0000723,1.14e-07,433;CL:0000766,1.27e-07,72;CL:0000034,1.40e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.12e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.21e-07,203;UBERON:0002371,9.59e-07,76 | |||
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| |||
|short_description=p5@CSF1 | |||
}} |
Revision as of 23:23, 11 September 2013
Short description: | p5@CSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525659_5end |
EntrezGene: | CSF1 |
HGNC: | 2432 |
UniProt: | E9PKP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.69e-08 | 427 |
somatic stem cell | 1.14e-07 | 433 |
myeloid leukocyte | 1.27e-07 | 72 |
stem cell | 1.40e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.21e-07 | 203 |
bone marrow | 9.59e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.