FFCP PHASE1:Hg19::chr19:843490..843500,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5657|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9495|TSSclassifier=S|UniProt=F5H8B6|association_with_transcript=149bp_to_ENST00000544537_5end|coexpression_cluster_id=C209|description=CAGE_peak_5_at_PRTN3_5end|id=chr19:843490..843500,+|ontology_enrichment_celltype=CL:0001024!4.43e-07!1|ontology_enrichment_celltype_v019=CL:0000037;5.71e-21;1!CL:0001024;5.71e-21;1|ontology_enrichment_celltype_v019_2=CL:0001024,6.31e-21,1;CL:0000763,1.12e-08,108;CL:0000049,1.12e-08,108;CL:0000037,4.03e-07,168;CL:0000988,9.80e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!1.36e-16!31;DOID:1240!8.39e-13!39;DOID:2531!2.36e-09!51;DOID:0060083!2.36e-09!51;DOID:225!3.32e-07!1|ontology_enrichment_disease_v019=DOID:8692;2.94e-31;31!DOID:225;2.54e-21;1!DOID:1240;1.28e-19;39!DOID:2531;4.68e-14;51!DOID:0060083;4.68e-14;51!DOID:74;2.35e-11;2|ontology_enrichment_disease_v019_2=DOID:8692,5.25e-31,31;DOID:1240,1.23e-24,39;DOID:225,2.30e-21,1;DOID:2531,8.15e-19,51;DOID:0060083,8.15e-19,51;DOID:74,2.23e-11,2;DOID:0050686,8.79e-07,137|ontology_enrichment_uberon=UBERON:0001869!1.84e-17!32;UBERON:0001893!2.40e-16!34;UBERON:0002780!7.50e-16!41;UBERON:0001890!7.50e-16!41;UBERON:0006240!7.50e-16!41;UBERON:0003080!1.99e-15!42;UBERON:0002791!6.55e-14!33;UBERON:0002020!1.84e-13!34;UBERON:0003528!1.84e-13!34;UBERON:0004177!3.58e-12!7;UBERON:0001950!1.37e-11!20;UBERON:0001049!7.73e-11!57;UBERON:0005068!7.73e-11!57;UBERON:0006241!7.73e-11!57;UBERON:0007135!7.73e-11!57;UBERON:0002619!1.66e-10!22;UBERON:0002616!2.12e-10!59;UBERON:0000955!4.50e-10!69;UBERON:0006238!4.50e-10!69;UBERON:0003056!5.44e-10!61;UBERON:0007023!9.07e-10!115;UBERON:0000956!3.41e-09!25;UBERON:0000203!3.41e-09!25;UBERON:0000200!1.38e-08!6;UBERON:0001017!4.00e-08!82;UBERON:0002106!5.64e-08!3;UBERON:0004854!5.64e-08!3;UBERON:0009034!5.64e-08!3;UBERON:0002095!5.64e-08!3;UBERON:0004782!5.64e-08!3;UBERON:0003281!5.64e-08!3;UBERON:0009664!5.64e-08!3;UBERON:0002296!5.64e-08!3;UBERON:0005602!5.64e-08!3;UBERON:0001179!5.64e-08!3;UBERON:0006293!5.64e-08!3;UBERON:0003075!1.06e-07!86;UBERON:0007284!1.06e-07!86;UBERON:0005743!1.21e-07!86;UBERON:0009663!1.72e-07!7;UBERON:0002346!2.97e-07!90;UBERON:0000153!4.93e-07!129;UBERON:0007811!4.93e-07!129;UBERON:0000989!6.24e-07!1;UBERON:0008811!6.24e-07!1;UBERON:0006258!6.24e-07!1;UBERON:0005876!6.24e-07!1;UBERON:0004874!6.24e-07!1;UBERON:0002581!7.82e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08941432768755,0,0,2.6635582281414,0,0,0.481764225311099,4.03599414382095,0,1.03051603426729,1.84344458585075,1.11838053946208,1.66849141711908,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8806767017418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@PRTN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5657 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9495 | |||
|TSSclassifier=S | |||
|UniProt=F5H8B6 | |||
|association_with_transcript=149bp_to_ENST00000544537_5end | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_5_at_PRTN3_5end | |||
|id=chr19:843490..843500,+ | |||
|ontology_enrichment_celltype=CL:0001024!4.43e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000037;5.71e-21;1!CL:0001024;5.71e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,6.31e-21,1;CL:0000763,1.12e-08,108;CL:0000049,1.12e-08,108;CL:0000037,4.03e-07,168;CL:0000988,9.80e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.36e-16!31;DOID:1240!8.39e-13!39;DOID:2531!2.36e-09!51;DOID:0060083!2.36e-09!51;DOID:225!3.32e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.94e-31;31!DOID:225;2.54e-21;1!DOID:1240;1.28e-19;39!DOID:2531;4.68e-14;51!DOID:0060083;4.68e-14;51!DOID:74;2.35e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.25e-31,31;DOID:1240,1.23e-24,39;DOID:225,2.30e-21,1;DOID:2531,8.15e-19,51;DOID:0060083,8.15e-19,51;DOID:74,2.23e-11,2;DOID:0050686,8.79e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.84e-17!32;UBERON:0001893!2.40e-16!34;UBERON:0002780!7.50e-16!41;UBERON:0001890!7.50e-16!41;UBERON:0006240!7.50e-16!41;UBERON:0003080!1.99e-15!42;UBERON:0002791!6.55e-14!33;UBERON:0002020!1.84e-13!34;UBERON:0003528!1.84e-13!34;UBERON:0004177!3.58e-12!7;UBERON:0001950!1.37e-11!20;UBERON:0001049!7.73e-11!57;UBERON:0005068!7.73e-11!57;UBERON:0006241!7.73e-11!57;UBERON:0007135!7.73e-11!57;UBERON:0002619!1.66e-10!22;UBERON:0002616!2.12e-10!59;UBERON:0000955!4.50e-10!69;UBERON:0006238!4.50e-10!69;UBERON:0003056!5.44e-10!61;UBERON:0007023!9.07e-10!115;UBERON:0000956!3.41e-09!25;UBERON:0000203!3.41e-09!25;UBERON:0000200!1.38e-08!6;UBERON:0001017!4.00e-08!82;UBERON:0002106!5.64e-08!3;UBERON:0004854!5.64e-08!3;UBERON:0009034!5.64e-08!3;UBERON:0002095!5.64e-08!3;UBERON:0004782!5.64e-08!3;UBERON:0003281!5.64e-08!3;UBERON:0009664!5.64e-08!3;UBERON:0002296!5.64e-08!3;UBERON:0005602!5.64e-08!3;UBERON:0001179!5.64e-08!3;UBERON:0006293!5.64e-08!3;UBERON:0003075!1.06e-07!86;UBERON:0007284!1.06e-07!86;UBERON:0005743!1.21e-07!86;UBERON:0009663!1.72e-07!7;UBERON:0002346!2.97e-07!90;UBERON:0000153!4.93e-07!129;UBERON:0007811!4.93e-07!129;UBERON:0000989!6.24e-07!1;UBERON:0008811!6.24e-07!1;UBERON:0006258!6.24e-07!1;UBERON:0005876!6.24e-07!1;UBERON:0004874!6.24e-07!1;UBERON:0002581!7.82e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@PRTN3 | |||
}} |
Revision as of 23:00, 11 September 2013
Short description: | p5@PRTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PRTN3_5end |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | 149bp_to_ENST00000544537_5end |
EntrezGene: | PRTN3 |
HGNC: | 9495 |
UniProt: | F5H8B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 6.31e-21 | 1 |
myeloid cell | 1.12e-08 | 108 |
common myeloid progenitor | 1.12e-08 | 108 |
hematopoietic stem cell | 4.03e-07 | 168 |
hematopoietic cell | 9.80e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.25e-31 | 31 |
leukemia | 1.23e-24 | 39 |
syndrome | 2.30e-21 | 1 |
hematologic cancer | 8.15e-19 | 51 |
immune system cancer | 8.15e-19 | 51 |
hematopoietic system disease | 2.23e-11 | 2 |
organ system cancer | 8.79e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.