FFCP PHASE1:Hg19::chr19:55919546..55919557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17895|TSSclassifier=S|UniProt=Q16763|association_with_transcript=-221bp_to_ENST00000264552,NM_014501,uc002qkx.1_5end|coexpression_cluster_id=C575|description=CAGE_peak_5_at_UBE2S_5end|id=chr19:55919546..55919557,-|ontology_enrichment_celltype=CL:0000860!6.11e-22!45;CL:0002057!1.45e-20!42;CL:0002087!9.04e-12!119;CL:0002009!2.22e-11!65;CL:0002031!2.26e-11!124;CL:0000738!2.83e-11!140;CL:0002194!3.61e-11!63;CL:0000576!3.61e-11!63;CL:0000040!3.61e-11!63;CL:0000559!3.61e-11!63;CL:0000988!7.67e-11!182;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0000839!2.50e-10!70;CL:0000037!2.72e-10!172;CL:0000566!2.72e-10!172;CL:0000557!3.54e-10!71;CL:0000766!3.70e-10!76;CL:0000763!3.36e-09!112;CL:0000049!3.36e-09!112|ontology_enrichment_celltype_v019=CL:0000860;3.35e-36;33!CL:0002057;3.35e-36;33!CL:0000473;2.00e-25;39!CL:0000234;2.00e-25;39!CL:0000576;7.91e-16;48!CL:0000766;6.72e-12;69|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-29,42;CL:0002057,1.01e-29,42;CL:0000473,1.13e-25,48;CL:0000234,1.13e-25,48;CL:0002194,5.30e-20,59;CL:0000576,5.30e-20,59;CL:0000040,5.30e-20,59;CL:0000559,5.30e-20,59;CL:0002009,2.86e-19,61;CL:0000766,1.93e-18,72;CL:0000839,1.24e-17,66;CL:0000557,2.48e-17,67;CL:0002087,3.68e-12,115;CL:0002031,1.58e-11,120;CL:0000763,2.16e-11,108;CL:0000049,2.16e-11,108;CL:0000738,2.95e-11,136;CL:0002032,5.21e-09,161;CL:0000837,5.21e-09,161;CL:0000037,1.68e-08,168;CL:0000988,6.62e-08,177|ontology_enrichment_development_v019=CL:0002057;3.66e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.05e-08!80;UBERON:0001474!3.33e-08!86;UBERON:0002390!9.79e-08!102;UBERON:0003061!9.79e-08!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.42e-15,76;UBERON:0001474,1.03e-13,82;UBERON:0004765,2.84e-12,90;UBERON:0002405,8.51e-12,93;UBERON:0002390,4.58e-11,98;UBERON:0003061,4.58e-11,98;UBERON:0001434,8.56e-11,100;UBERON:0002193,8.32e-10,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,1.18009283054671,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0.232401601740905,0,0,0,0.401088894940283,0.868043482863407,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,0,1.23350366406548,2.16794459626573,0.28769239232215,0.768482119587302,0.945928919554341,2.41321976515633,3.22742341791913,4.06279459783025,0.941211697713023,0.272906150057846,0.674170453335254,0.612167784741805,0.641858054152187,1.91801137739712,0.659702600373432,1.19678194572979,0.426224750532694,0.870627715885752,2.26954089876456,1.24564449799115,1.00499466102697,1.0429658368404,1.52032191293582,1.21079900526674,1.47311054395026,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,1.02800749499755,0,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.6312121671319,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.862510299438069,1.79680250791648,0,0,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.426851060090485,0.159426272728822,0.199579371432817,0,0.2116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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17895 | |||
|TSSclassifier=S | |||
|UniProt=Q16763 | |||
|association_with_transcript=-221bp_to_ENST00000264552,NM_014501,uc002qkx.1_5end | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_5_at_UBE2S_5end | |||
|id=chr19:55919546..55919557,- | |||
|ontology_enrichment_celltype=CL:0000860!6.11e-22!45;CL:0002057!1.45e-20!42;CL:0002087!9.04e-12!119;CL:0002009!2.22e-11!65;CL:0002031!2.26e-11!124;CL:0000738!2.83e-11!140;CL:0002194!3.61e-11!63;CL:0000576!3.61e-11!63;CL:0000040!3.61e-11!63;CL:0000559!3.61e-11!63;CL:0000988!7.67e-11!182;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0000839!2.50e-10!70;CL:0000037!2.72e-10!172;CL:0000566!2.72e-10!172;CL:0000557!3.54e-10!71;CL:0000766!3.70e-10!76;CL:0000763!3.36e-09!112;CL:0000049!3.36e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-36;33!CL:0002057;3.35e-36;33!CL:0000473;2.00e-25;39!CL:0000234;2.00e-25;39!CL:0000576;7.91e-16;48!CL:0000766;6.72e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-29,42;CL:0002057,1.01e-29,42;CL:0000473,1.13e-25,48;CL:0000234,1.13e-25,48;CL:0002194,5.30e-20,59;CL:0000576,5.30e-20,59;CL:0000040,5.30e-20,59;CL:0000559,5.30e-20,59;CL:0002009,2.86e-19,61;CL:0000766,1.93e-18,72;CL:0000839,1.24e-17,66;CL:0000557,2.48e-17,67;CL:0002087,3.68e-12,115;CL:0002031,1.58e-11,120;CL:0000763,2.16e-11,108;CL:0000049,2.16e-11,108;CL:0000738,2.95e-11,136;CL:0002032,5.21e-09,161;CL:0000837,5.21e-09,161;CL:0000037,1.68e-08,168;CL:0000988,6.62e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.05e-08!80;UBERON:0001474!3.33e-08!86;UBERON:0002390!9.79e-08!102;UBERON:0003061!9.79e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.42e-15,76;UBERON:0001474,1.03e-13,82;UBERON:0004765,2.84e-12,90;UBERON:0002405,8.51e-12,93;UBERON:0002390,4.58e-11,98;UBERON:0003061,4.58e-11,98;UBERON:0001434,8.56e-11,100;UBERON:0002193,8.32e-10,108 | |||
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| |||
|short_description=p5@UBE2S | |||
}} |
Revision as of 22:28, 11 September 2013
Short description: | p5@UBE2S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UBE2S_5end |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | -221bp_to_ENST00000264552, NM_014501, uc002qkx.1_5end |
EntrezGene: | UBE2S |
HGNC: | 17895 |
UniProt: | Q16763 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-29 | 42 |
defensive cell | 1.13e-25 | 48 |
phagocyte | 1.13e-25 | 48 |
monopoietic cell | 5.30e-20 | 59 |
monocyte | 5.30e-20 | 59 |
monoblast | 5.30e-20 | 59 |
promonocyte | 5.30e-20 | 59 |
macrophage dendritic cell progenitor | 2.86e-19 | 61 |
myeloid leukocyte | 1.93e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.24e-17 | 66 |
granulocyte monocyte progenitor cell | 2.48e-17 | 67 |
nongranular leukocyte | 3.68e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.58e-11 | 120 |
myeloid cell | 2.16e-11 | 108 |
common myeloid progenitor | 2.16e-11 | 108 |
leukocyte | 2.95e-11 | 136 |
hematopoietic oligopotent progenitor cell | 5.21e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.21e-09 | 161 |
hematopoietic stem cell | 1.68e-08 | 168 |
hematopoietic cell | 6.62e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.42e-15 | 76 |
bone element | 1.03e-13 | 82 |
skeletal element | 2.84e-12 | 90 |
immune system | 8.51e-12 | 93 |
hematopoietic system | 4.58e-11 | 98 |
blood island | 4.58e-11 | 98 |
skeletal system | 8.56e-11 | 100 |
hemolymphoid system | 8.32e-10 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.