FFCP PHASE1:Hg19::chr19:55174400..55174461,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11006|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6608|TSSclassifier=W|UniProt=A8MUE1|association_with_transcript=0bp_to_ENST00000391734,ENST00000430952_5end|coexpression_cluster_id=C143|description=CAGE_peak_1_at_LILRB4_5end|id=chr19:55174400..55174461,+|ontology_enrichment_celltype=CL:0000738!1.42e-42!140;CL:0002009!1.81e-42!65;CL:0002194!2.22e-42!63;CL:0000576!2.22e-42!63;CL:0000040!2.22e-42!63;CL:0000559!2.22e-42!63;CL:0002087!4.30e-41!119;CL:0000557!5.49e-41!71;CL:0000766!1.24e-40!76;CL:0000839!4.13e-39!70;CL:0002031!2.41e-37!124;CL:0000037!3.64e-37!172;CL:0000566!3.64e-37!172;CL:0002057!4.45e-35!42;CL:0002032!9.15e-34!165;CL:0000837!9.15e-34!165;CL:0000988!1.38e-32!182;CL:0000860!2.63e-31!45;CL:0000763!1.50e-30!112;CL:0000049!1.50e-30!112;CL:0002393!8.90e-08!9;CL:0002397!8.90e-08!9|ontology_enrichment_celltype_v019=CL:0000473;1.13e-29;39!CL:0000234;1.13e-29;39!CL:0000860;3.77e-29;33!CL:0002057;3.77e-29;33!CL:0000576;1.91e-28;48!CL:0000766;4.40e-19;69!CL:0002087;7.99e-12;104!CL:0000763;1.91e-10;100!CL:0000738;2.94e-09;136!CL:0000235;7.57e-08;6|ontology_enrichment_celltype_v019_2=CL:0002194,5.53e-53,59;CL:0000576,5.53e-53,59;CL:0000040,5.53e-53,59;CL:0000559,5.53e-53,59;CL:0002009,2.23e-50,61;CL:0000473,1.09e-45,48;CL:0000234,1.09e-45,48;CL:0000557,2.21e-45,67;CL:0000766,4.32e-45,72;CL:0000839,1.42e-44,66;CL:0002087,1.11e-42,115;CL:0000860,3.85e-39,42;CL:0002057,3.85e-39,42;CL:0000738,6.00e-38,136;CL:0002031,2.55e-34,120;CL:0000037,5.57e-33,168;CL:0000763,2.28e-30,108;CL:0000049,2.28e-30,108;CL:0002032,2.00e-29,161;CL:0000837,2.00e-29,161;CL:0000988,2.08e-29,177;CL:0002393,1.58e-08,9;CL:0002397,1.58e-08,9;CL:0000235,7.62e-08,6|ontology_enrichment_development_v019=CL:0002057;2.86e-28;42!CL:0000049;1.40e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.19e-48!115;UBERON:0002390!2.78e-42!102;UBERON:0003061!2.78e-42!102;UBERON:0002193!1.30e-38!112;UBERON:0002371!4.75e-36!80;UBERON:0001474!1.92e-31!86;UBERON:0002405!3.90e-28!115;UBERON:0004765!4.35e-24!101;UBERON:0001434!4.35e-24!101;UBERON:0001049!2.48e-18!57;UBERON:0005068!2.48e-18!57;UBERON:0006241!2.48e-18!57;UBERON:0007135!2.48e-18!57;UBERON:0003080!5.57e-15!42;UBERON:0002780!1.12e-14!41;UBERON:0001890!1.12e-14!41;UBERON:0006240!1.12e-14!41;UBERON:0002616!5.39e-14!59;UBERON:0001893!4.04e-12!34;UBERON:0001017!4.29e-12!82;UBERON:0002020!4.84e-12!34;UBERON:0003528!4.84e-12!34;UBERON:0000955!8.76e-12!69;UBERON:0006238!8.76e-12!69;UBERON:0003081!1.03e-11!216;UBERON:0002791!1.06e-11!33;UBERON:0005743!1.97e-11!86;UBERON:0001869!5.72e-11!32;UBERON:0003075!9.56e-11!86;UBERON:0007284!9.56e-11!86;UBERON:0002619!5.77e-10!22;UBERON:0002346!1.54e-09!90;UBERON:0000073!2.04e-09!94;UBERON:0001016!2.04e-09!94;UBERON:0002204!2.50e-09!167;UBERON:0001950!6.48e-09!20;UBERON:0000956!5.49e-08!25;UBERON:0000203!5.49e-08!25;UBERON:0003056!9.48e-08!61;UBERON:0000479!6.07e-07!787|ontology_enrichment_uberon_v019=UBERON:0007023;5.65e-13;114!UBERON:0002780;2.77e-12;41!UBERON:0001890;2.77e-12;41!UBERON:0001893;1.68e-11;34!UBERON:0003528;2.25e-11;34!UBERON:0002020;2.25e-11;34!UBERON:0002791;3.31e-11;32!UBERON:0000073;3.83e-11;53!UBERON:0002616;3.83e-11;53!UBERON:0001869;4.64e-11;32!UBERON:0002619;5.56e-11;22!UBERON:0001950;8.31e-10;20!UBERON:0000956;5.93e-09;25!UBERON:0000203;5.93e-09;25!UBERON:0000955;6.57e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.06e-50,114;UBERON:0002390,1.81e-47,98;UBERON:0003061,1.81e-47,98;UBERON:0002193,6.98e-43,108;UBERON:0002371,3.34e-40,76;UBERON:0002405,9.09e-37,93;UBERON:0001474,2.58e-35,82;UBERON:0004765,7.23e-30,90;UBERON:0001434,2.69e-25,100;UBERON:0001049,2.05e-20,56;UBERON:0005068,2.05e-20,56;UBERON:0006241,2.05e-20,56;UBERON:0007135,2.05e-20,56;UBERON:0000073,1.18e-18,53;UBERON:0002616,1.18e-18,53;UBERON:0002780,1.81e-16,41;UBERON:0001890,1.81e-16,41;UBERON:0003080,1.81e-16,41;UBERON:0006240,1.81e-16,41;UBERON:0003081,5.31e-16,203;UBERON:0001017,1.14e-13,81;UBERON:0000955,1.25e-13,68;UBERON:0006238,1.25e-13,68;UBERON:0001893,1.34e-13,34;UBERON:0003528,1.65e-13,34;UBERON:0002020,1.65e-13,34;UBERON:0003075,1.57e-12,82;UBERON:0007284,1.57e-12,82;UBERON:0002791,1.80e-12,32;UBERON:0001869,2.66e-12,32;UBERON:0001016,1.72e-11,89;UBERON:0002346,3.03e-11,86;UBERON:0002619,5.61e-11,22;UBERON:0002204,6.89e-10,167;UBERON:0001950,8.41e-10,20;UBERON:0003056,5.77e-09,61;UBERON:0000956,5.98e-09,25;UBERON:0000203,5.98e-09,25;UBERON:0000479,8.03e-09,773;UBERON:0000923,2.05e-07,560;UBERON:0010316,2.05e-07,560;UBERON:0005291,2.05e-07,560;UBERON:0006598,2.05e-07,560;UBERON:0010317,2.05e-07,560;UBERON:0002532,2.05e-07,560;UBERON:0010371,2.64e-07,104;UBERON:0002050,4.75e-07,564|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.893005858071,0,0,0,0,0,0,0,0,0,3.20936304141395,2.13461532569859,2.83358812729245,51.1373559903575,24.1812520801244,68.4287265057056,0,0,0,0,0,12.6248188913984,86.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6608 | |||
|TSSclassifier=W | |||
|UniProt=A8MUE1 | |||
|association_with_transcript=0bp_to_ENST00000391734,ENST00000430952_5end | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_1_at_LILRB4_5end | |||
|id=chr19:55174400..55174461,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.42e-42!140;CL:0002009!1.81e-42!65;CL:0002194!2.22e-42!63;CL:0000576!2.22e-42!63;CL:0000040!2.22e-42!63;CL:0000559!2.22e-42!63;CL:0002087!4.30e-41!119;CL:0000557!5.49e-41!71;CL:0000766!1.24e-40!76;CL:0000839!4.13e-39!70;CL:0002031!2.41e-37!124;CL:0000037!3.64e-37!172;CL:0000566!3.64e-37!172;CL:0002057!4.45e-35!42;CL:0002032!9.15e-34!165;CL:0000837!9.15e-34!165;CL:0000988!1.38e-32!182;CL:0000860!2.63e-31!45;CL:0000763!1.50e-30!112;CL:0000049!1.50e-30!112;CL:0002393!8.90e-08!9;CL:0002397!8.90e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.13e-29;39!CL:0000234;1.13e-29;39!CL:0000860;3.77e-29;33!CL:0002057;3.77e-29;33!CL:0000576;1.91e-28;48!CL:0000766;4.40e-19;69!CL:0002087;7.99e-12;104!CL:0000763;1.91e-10;100!CL:0000738;2.94e-09;136!CL:0000235;7.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.53e-53,59;CL:0000576,5.53e-53,59;CL:0000040,5.53e-53,59;CL:0000559,5.53e-53,59;CL:0002009,2.23e-50,61;CL:0000473,1.09e-45,48;CL:0000234,1.09e-45,48;CL:0000557,2.21e-45,67;CL:0000766,4.32e-45,72;CL:0000839,1.42e-44,66;CL:0002087,1.11e-42,115;CL:0000860,3.85e-39,42;CL:0002057,3.85e-39,42;CL:0000738,6.00e-38,136;CL:0002031,2.55e-34,120;CL:0000037,5.57e-33,168;CL:0000763,2.28e-30,108;CL:0000049,2.28e-30,108;CL:0002032,2.00e-29,161;CL:0000837,2.00e-29,161;CL:0000988,2.08e-29,177;CL:0002393,1.58e-08,9;CL:0002397,1.58e-08,9;CL:0000235,7.62e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-28;42!CL:0000049;1.40e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-48!115;UBERON:0002390!2.78e-42!102;UBERON:0003061!2.78e-42!102;UBERON:0002193!1.30e-38!112;UBERON:0002371!4.75e-36!80;UBERON:0001474!1.92e-31!86;UBERON:0002405!3.90e-28!115;UBERON:0004765!4.35e-24!101;UBERON:0001434!4.35e-24!101;UBERON:0001049!2.48e-18!57;UBERON:0005068!2.48e-18!57;UBERON:0006241!2.48e-18!57;UBERON:0007135!2.48e-18!57;UBERON:0003080!5.57e-15!42;UBERON:0002780!1.12e-14!41;UBERON:0001890!1.12e-14!41;UBERON:0006240!1.12e-14!41;UBERON:0002616!5.39e-14!59;UBERON:0001893!4.04e-12!34;UBERON:0001017!4.29e-12!82;UBERON:0002020!4.84e-12!34;UBERON:0003528!4.84e-12!34;UBERON:0000955!8.76e-12!69;UBERON:0006238!8.76e-12!69;UBERON:0003081!1.03e-11!216;UBERON:0002791!1.06e-11!33;UBERON:0005743!1.97e-11!86;UBERON:0001869!5.72e-11!32;UBERON:0003075!9.56e-11!86;UBERON:0007284!9.56e-11!86;UBERON:0002619!5.77e-10!22;UBERON:0002346!1.54e-09!90;UBERON:0000073!2.04e-09!94;UBERON:0001016!2.04e-09!94;UBERON:0002204!2.50e-09!167;UBERON:0001950!6.48e-09!20;UBERON:0000956!5.49e-08!25;UBERON:0000203!5.49e-08!25;UBERON:0003056!9.48e-08!61;UBERON:0000479!6.07e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.65e-13;114!UBERON:0002780;2.77e-12;41!UBERON:0001890;2.77e-12;41!UBERON:0001893;1.68e-11;34!UBERON:0003528;2.25e-11;34!UBERON:0002020;2.25e-11;34!UBERON:0002791;3.31e-11;32!UBERON:0000073;3.83e-11;53!UBERON:0002616;3.83e-11;53!UBERON:0001869;4.64e-11;32!UBERON:0002619;5.56e-11;22!UBERON:0001950;8.31e-10;20!UBERON:0000956;5.93e-09;25!UBERON:0000203;5.93e-09;25!UBERON:0000955;6.57e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.06e-50,114;UBERON:0002390,1.81e-47,98;UBERON:0003061,1.81e-47,98;UBERON:0002193,6.98e-43,108;UBERON:0002371,3.34e-40,76;UBERON:0002405,9.09e-37,93;UBERON:0001474,2.58e-35,82;UBERON:0004765,7.23e-30,90;UBERON:0001434,2.69e-25,100;UBERON:0001049,2.05e-20,56;UBERON:0005068,2.05e-20,56;UBERON:0006241,2.05e-20,56;UBERON:0007135,2.05e-20,56;UBERON:0000073,1.18e-18,53;UBERON:0002616,1.18e-18,53;UBERON:0002780,1.81e-16,41;UBERON:0001890,1.81e-16,41;UBERON:0003080,1.81e-16,41;UBERON:0006240,1.81e-16,41;UBERON:0003081,5.31e-16,203;UBERON:0001017,1.14e-13,81;UBERON:0000955,1.25e-13,68;UBERON:0006238,1.25e-13,68;UBERON:0001893,1.34e-13,34;UBERON:0003528,1.65e-13,34;UBERON:0002020,1.65e-13,34;UBERON:0003075,1.57e-12,82;UBERON:0007284,1.57e-12,82;UBERON:0002791,1.80e-12,32;UBERON:0001869,2.66e-12,32;UBERON:0001016,1.72e-11,89;UBERON:0002346,3.03e-11,86;UBERON:0002619,5.61e-11,22;UBERON:0002204,6.89e-10,167;UBERON:0001950,8.41e-10,20;UBERON:0003056,5.77e-09,61;UBERON:0000956,5.98e-09,25;UBERON:0000203,5.98e-09,25;UBERON:0000479,8.03e-09,773;UBERON:0000923,2.05e-07,560;UBERON:0010316,2.05e-07,560;UBERON:0005291,2.05e-07,560;UBERON:0006598,2.05e-07,560;UBERON:0010317,2.05e-07,560;UBERON:0002532,2.05e-07,560;UBERON:0010371,2.64e-07,104;UBERON:0002050,4.75e-07,564 | |||
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| |||
|short_description=p1@LILRB4 | |||
}} |
Revision as of 22:22, 11 September 2013
Short description: | p1@LILRB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LILRB4_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 0bp_to_ENST00000391734, ENST00000430952_5end |
EntrezGene: | LILRB4 |
HGNC: | 6608 |
UniProt: | A8MUE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.53e-53 | 59 |
monocyte | 5.53e-53 | 59 |
monoblast | 5.53e-53 | 59 |
promonocyte | 5.53e-53 | 59 |
macrophage dendritic cell progenitor | 2.23e-50 | 61 |
defensive cell | 1.09e-45 | 48 |
phagocyte | 1.09e-45 | 48 |
granulocyte monocyte progenitor cell | 2.21e-45 | 67 |
myeloid leukocyte | 4.32e-45 | 72 |
myeloid lineage restricted progenitor cell | 1.42e-44 | 66 |
nongranular leukocyte | 1.11e-42 | 115 |
classical monocyte | 3.85e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-39 | 42 |
leukocyte | 6.00e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 2.55e-34 | 120 |
hematopoietic stem cell | 5.57e-33 | 168 |
myeloid cell | 2.28e-30 | 108 |
common myeloid progenitor | 2.28e-30 | 108 |
hematopoietic oligopotent progenitor cell | 2.00e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-29 | 161 |
hematopoietic cell | 2.08e-29 | 177 |
intermediate monocyte | 1.58e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.58e-08 | 9 |
macrophage | 7.62e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.