FFCP PHASE1:Hg19::chr19:5131159..5131166,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23030|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29136|TSSclassifier=S|UniProt=O94953|association_with_transcript=-62bp_to_AL133622_5end|coexpression_cluster_id=C2499|description=CAGE_peak_5_at_KDM4B_5end|id=chr19:5131159..5131166,+|ontology_enrichment_celltype=CL:0000945!1.27e-28!24;CL:0000826!1.27e-28!24;CL:0000236!6.66e-15!14;CL:0000838!1.30e-11!52;CL:0000542!2.45e-11!53;CL:0000051!2.45e-11!53;CL:0002087!1.05e-08!119;CL:0000037!4.46e-07!172;CL:0000566!4.46e-07!172;CL:0000738!8.70e-07!140|ontology_enrichment_celltype_v019=CL:0000945;2.66e-42;24!CL:0000542;4.13e-12;53!CL:0000236;1.08e-09;13|ontology_enrichment_celltype_v019_2=CL:0000945,2.66e-42,24;CL:0000826,2.66e-42,24;CL:0000838,9.24e-20,52;CL:0000542,2.15e-19,53;CL:0000051,2.15e-19,53;CL:0000236,4.75e-09,14;CL:0002087,5.38e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.25e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000738,1.23e-07,136|ontology_enrichment_development_v019=CL:0000051;4.13e-12;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;2.05e-29;1!DOID:0050177;2.05e-29;1!DOID:0050427;2.05e-29;1|ontology_enrichment_disease_v019_2=DOID:630,9.99e-30,1;DOID:0050177,9.99e-30,1;DOID:0050427,9.99e-30,1|ontology_enrichment_uberon=UBERON:0002106!9.20e-07!3;UBERON:0004854!9.20e-07!3;UBERON:0009034!9.20e-07!3;UBERON:0002095!9.20e-07!3;UBERON:0004782!9.20e-07!3;UBERON:0003281!9.20e-07!3;UBERON:0009664!9.20e-07!3;UBERON:0002296!9.20e-07!3;UBERON:0005602!9.20e-07!3;UBERON:0001179!9.20e-07!3;UBERON:0006293!9.20e-07!3|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.55991119954897,1.25937250101887,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194|short_description=p5@KDM4B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29136 | |||
|TSSclassifier=S | |||
|UniProt=O94953 | |||
|association_with_transcript=-62bp_to_AL133622_5end | |||
|coexpression_cluster_id=C2499 | |||
|description=CAGE_peak_5_at_KDM4B_5end | |||
|id=chr19:5131159..5131166,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.27e-28!24;CL:0000826!1.27e-28!24;CL:0000236!6.66e-15!14;CL:0000838!1.30e-11!52;CL:0000542!2.45e-11!53;CL:0000051!2.45e-11!53;CL:0002087!1.05e-08!119;CL:0000037!4.46e-07!172;CL:0000566!4.46e-07!172;CL:0000738!8.70e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.66e-42;24!CL:0000542;4.13e-12;53!CL:0000236;1.08e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.66e-42,24;CL:0000826,2.66e-42,24;CL:0000838,9.24e-20,52;CL:0000542,2.15e-19,53;CL:0000051,2.15e-19,53;CL:0000236,4.75e-09,14;CL:0002087,5.38e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.25e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000738,1.23e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;4.13e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;2.05e-29;1!DOID:0050177;2.05e-29;1!DOID:0050427;2.05e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.99e-30,1;DOID:0050177,9.99e-30,1;DOID:0050427,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.20e-07!3;UBERON:0004854!9.20e-07!3;UBERON:0009034!9.20e-07!3;UBERON:0002095!9.20e-07!3;UBERON:0004782!9.20e-07!3;UBERON:0003281!9.20e-07!3;UBERON:0009664!9.20e-07!3;UBERON:0002296!9.20e-07!3;UBERON:0005602!9.20e-07!3;UBERON:0001179!9.20e-07!3;UBERON:0006293!9.20e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.55991119954897,1.25937250101887,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p5@KDM4B | |||
}} |
Revision as of 22:00, 11 September 2013
Short description: | p5@KDM4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KDM4B_5end |
Coexpression cluster: | C2499_acute_CD19_B_xeroderma_spleen_vein_plasma |
Association with transcript: | -62bp_to_AL133622_5end |
EntrezGene: | KDM4B |
HGNC: | 29136 |
UniProt: | O94953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.66e-42 | 24 |
pro-B cell | 2.66e-42 | 24 |
lymphoid lineage restricted progenitor cell | 9.24e-20 | 52 |
lymphocyte | 2.15e-19 | 53 |
common lymphoid progenitor | 2.15e-19 | 53 |
B cell | 4.75e-09 | 14 |
nongranular leukocyte | 5.38e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.25e-08 | 120 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
leukocyte | 1.23e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.99e-30 | 1 |
monogenic disease | 9.99e-30 | 1 |
xeroderma pigmentosum | 9.99e-30 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.