FFCP PHASE1:Hg19::chr19:50709317..50709333,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3813|description=CAGE_peak_at_chr19:50709317..50709333,+|id=chr19:50709317..50709333,+|ontology_enrichment_celltype=CL:0002076!3.66e-11!43;CL:0002251!6.79e-09!21;CL:0002623!6.51e-08!3;CL:0000223!4.76e-07!59|ontology_enrichment_celltype_v019=CL:0000575;6.46e-16;2!CL:0000313;2.31e-09;1!CL:0002537;2.24e-07;5|ontology_enrichment_celltype_v019_2=CL:0000575,4.08e-16,2;CL:0000313,2.22e-09,1;CL:0002537,2.24e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:299!5.73e-13!25;DOID:305!2.71e-07!106|ontology_enrichment_disease_v019=DOID:2152;2.31e-09;1!DOID:0050619;4.72e-09;1!DOID:1357;4.72e-09;1!DOID:3151;8.16e-09;1!DOID:178;8.16e-09;1!DOID:326;8.16e-09;1!DOID:3978;8.16e-09;1!DOID:3394;8.16e-09;1!DOID:5844;8.16e-09;1!DOID:3149;8.16e-09;1!DOID:4362;2.54e-07;5|ontology_enrichment_disease_v019_2=DOID:2152,2.22e-09,1;DOID:0050619,5.31e-09,1;DOID:1357,5.31e-09,1;DOID:178,7.27e-09,1;DOID:326,7.27e-09,1;DOID:3978,7.27e-09,1;DOID:3394,7.27e-09,1;DOID:5844,7.27e-09,1;DOID:3151,1.07e-08,1;DOID:3149,1.07e-08,1;DOID:4362,2.54e-07,5|ontology_enrichment_uberon=UBERON:0004119!1.73e-10!169;UBERON:0000925!1.73e-10!169;UBERON:0006595!1.73e-10!169;UBERON:0001007!2.78e-08!155;UBERON:0001555!2.78e-08!155;UBERON:0007026!2.78e-08!155;UBERON:0000161!3.12e-08!35;UBERON:0000365!4.72e-08!5;UBERON:0000974!9.74e-08!10;UBERON:0005795!4.29e-07!22;UBERON:0004921!8.74e-07!129;UBERON:0004185!8.74e-07!129|ontology_enrichment_uberon_v019=UBERON:0004911;2.31e-09;1!UBERON:0000997;3.31e-09;1!UBERON:0005056;3.31e-09;1!UBERON:0004176;3.31e-09;1!UBERON:0002372;4.72e-09;1!UBERON:0007029;4.72e-09;1!UBERON:0001764;4.72e-09;1!UBERON:0001961;4.72e-09;1!UBERON:0001825;4.72e-09;1!UBERON:0001744;4.72e-09;1!UBERON:0001042;4.72e-09;1!UBERON:0001735;4.72e-09;1!UBERON:0000014;1.58e-08;4!UBERON:0000964;2.05e-08;4!UBERON:0010409;2.05e-08;4!UBERON:0005631;1.27e-07;10!UBERON:0000158;1.27e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.22e-09,1;UBERON:0000997,2.82e-09,1;UBERON:0005056,2.82e-09,1;UBERON:0007029,4.54e-09,1;UBERON:0002372,4.91e-09,1;UBERON:0001961,4.91e-09,1;UBERON:0001744,4.91e-09,1;UBERON:0001735,4.91e-09,1;UBERON:0001764,5.31e-09,1;UBERON:0001825,5.31e-09,1;UBERON:0000964,1.64e-08,4;UBERON:0010409,1.64e-08,4;UBERON:0004348,1.64e-08,4;UBERON:0005427,1.64e-08,4;UBERON:0000014,1.77e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.82147644146271,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.552485933615378,0,0,0,0.902399225814824,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,13.3696911453106,0,11.3649459776716,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,19.2404767104473,0.153900517007594,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,1.68069372556344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,5.0332324117188,3.82170349916073,0,0,0,0,0,0,0.872901148395775,0,1.58186518546373,0,0,0,15.4485592360494,0,0.85381197895741,0,0.288180834308212,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0,1.34173875039706,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.628817220398664,0,0,0,0,0,0,0,0,0,2.04170325125305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.49621117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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3813 | |||
|description=CAGE_peak_at_chr19:50709317..50709333,+ | |||
|id=chr19:50709317..50709333,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.66e-11!43;CL:0002251!6.79e-09!21;CL:0002623!6.51e-08!3;CL:0000223!4.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000575;6.46e-16;2!CL:0000313;2.31e-09;1!CL:0002537;2.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,4.08e-16,2;CL:0000313,2.22e-09,1;CL:0002537,2.24e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!5.73e-13!25;DOID:305!2.71e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.31e-09;1!DOID:0050619;4.72e-09;1!DOID:1357;4.72e-09;1!DOID:3151;8.16e-09;1!DOID:178;8.16e-09;1!DOID:326;8.16e-09;1!DOID:3978;8.16e-09;1!DOID:3394;8.16e-09;1!DOID:5844;8.16e-09;1!DOID:3149;8.16e-09;1!DOID:4362;2.54e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.22e-09,1;DOID:0050619,5.31e-09,1;DOID:1357,5.31e-09,1;DOID:178,7.27e-09,1;DOID:326,7.27e-09,1;DOID:3978,7.27e-09,1;DOID:3394,7.27e-09,1;DOID:5844,7.27e-09,1;DOID:3151,1.07e-08,1;DOID:3149,1.07e-08,1;DOID:4362,2.54e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.73e-10!169;UBERON:0000925!1.73e-10!169;UBERON:0006595!1.73e-10!169;UBERON:0001007!2.78e-08!155;UBERON:0001555!2.78e-08!155;UBERON:0007026!2.78e-08!155;UBERON:0000161!3.12e-08!35;UBERON:0000365!4.72e-08!5;UBERON:0000974!9.74e-08!10;UBERON:0005795!4.29e-07!22;UBERON:0004921!8.74e-07!129;UBERON:0004185!8.74e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.31e-09;1!UBERON:0000997;3.31e-09;1!UBERON:0005056;3.31e-09;1!UBERON:0004176;3.31e-09;1!UBERON:0002372;4.72e-09;1!UBERON:0007029;4.72e-09;1!UBERON:0001764;4.72e-09;1!UBERON:0001961;4.72e-09;1!UBERON:0001825;4.72e-09;1!UBERON:0001744;4.72e-09;1!UBERON:0001042;4.72e-09;1!UBERON:0001735;4.72e-09;1!UBERON:0000014;1.58e-08;4!UBERON:0000964;2.05e-08;4!UBERON:0010409;2.05e-08;4!UBERON:0005631;1.27e-07;10!UBERON:0000158;1.27e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.22e-09,1;UBERON:0000997,2.82e-09,1;UBERON:0005056,2.82e-09,1;UBERON:0007029,4.54e-09,1;UBERON:0002372,4.91e-09,1;UBERON:0001961,4.91e-09,1;UBERON:0001744,4.91e-09,1;UBERON:0001735,4.91e-09,1;UBERON:0001764,5.31e-09,1;UBERON:0001825,5.31e-09,1;UBERON:0000964,1.64e-08,4;UBERON:0010409,1.64e-08,4;UBERON:0004348,1.64e-08,4;UBERON:0005427,1.64e-08,4;UBERON:0000014,1.77e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.82147644146271,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.552485933615378,0,0,0,0.902399225814824,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,13.3696911453106,0,11.3649459776716,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,19.2404767104473,0.153900517007594,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,1.68069372556344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,5.0332324117188,3.82170349916073,0,0,0,0,0,0,0.872901148395775,0,1.58186518546373,0,0,0,15.4485592360494,0,0.85381197895741,0,0.288180834308212,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0,1.34173875039706,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.628817220398664,0,0,0,0,0,0,0,0,0,2.04170325125305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,1.68163297988273,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.51215543128185,4.83881763269864,0,0,0,0,0.68732060563215,0,0,5.8164824534852,0.098150233615243,0.731507549893617,0,0,0,2.4285549652957,3.27515248846948,0,0,0,0,0,2.77826969188601,0.437119121007915,0.940634592723046,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0.387533459016037,0.31037357147929,0,0.12729431655633,0,1.08858373948481,0,2.08791364345221,1.64961072403156,0,0.244209805832924,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:50709317..50709333,+ | |||
}} |
Revision as of 21:53, 11 September 2013
Short description: | p@chr19:50709317..50709333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:50709317..50709333, + |
Coexpression cluster: | C3813_cervical_amniotic_gall_salivary_tongue_tonsil_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 4.08e-16 | 2 |
serous secreting cell | 2.22e-09 | 1 |
amnion mesenchymal stem cell | 2.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.22e-09 | 1 |
mammalian vulva | 2.82e-09 | 1 |
external female genitalia | 2.82e-09 | 1 |
surface | 4.54e-09 | 1 |
tonsil | 4.91e-09 | 1 |
mucosa-associated lymphoid tissue | 4.91e-09 | 1 |
lymphoid tissue | 4.91e-09 | 1 |
tonsillar ring | 4.91e-09 | 1 |
maxillary sinus | 5.31e-09 | 1 |
paranasal sinus | 5.31e-09 | 1 |
cornea | 1.64e-08 | 4 |
eye surface | 1.64e-08 | 4 |
optic eminence | 1.64e-08 | 4 |
corneal primordium | 1.64e-08 | 4 |
zone of skin | 1.77e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.22e-09 | 1 |
paranasal sinus cancer | 5.31e-09 | 1 |
maxillary sinus cancer | 5.31e-09 | 1 |
vascular disease | 7.27e-09 | 1 |
ischemia | 7.27e-09 | 1 |
extrinsic cardiomyopathy | 7.27e-09 | 1 |
myocardial ischemia | 7.27e-09 | 1 |
myocardial infarction | 7.27e-09 | 1 |
skin squamous cell carcinoma | 1.07e-08 | 1 |
keratoacanthoma | 1.07e-08 | 1 |
cervical cancer | 2.54e-07 | 5 |
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