FFCP PHASE1:Hg19::chr19:49264178..49264182,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:49264178..49264182,+|id=chr19:49264178..49264182,+|ontology_enrichment_celltype=CL:0000037!5.49e-09!172;CL:0000566!5.49e-09!172;CL:0000988!3.57e-08!182;CL:0000453!1.43e-07!5;CL:0002032!2.86e-07!165;CL:0000837!2.86e-07!165|ontology_enrichment_celltype_v019=CL:0001014;1.80e-18;2!CL:0001016;1.80e-18;2!CL:0000453;3.64e-16;5!CL:0000451;1.29e-12;10!CL:1001319;4.66e-10;1!CL:1000600;4.66e-10;1!CL:0002032;1.68e-09;1!CL:0000817;1.68e-09;1!CL:0000557;1.68e-09;1!CL:0000990;3.27e-09;8!CL:0000840;9.87e-07;5|ontology_enrichment_celltype_v019_2=CL:0001014,1.73e-18,2;CL:0001016,1.73e-18,2;CL:0000453,3.47e-16,5;CL:0000451,1.16e-12,10;CL:1001319,4.87e-10,1;CL:1000600,4.87e-10,1;CL:0000990,3.18e-09,8;CL:0000037,3.59e-07,168;CL:0000840,9.74e-07,5;CL:0001029,9.74e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!5.25e-13!239;DOID:162!1.04e-12!235;DOID:2531!4.71e-08!51;DOID:0060083!4.71e-08!51;DOID:0050687!4.85e-08!143;DOID:305!6.56e-08!106;DOID:1749!6.81e-08!14|ontology_enrichment_disease_v019=DOID:0060085;7.82e-10;1!DOID:3165;7.82e-10;1!DOID:0060121;7.82e-10;1!DOID:3111;7.82e-10;1!DOID:2438;7.82e-10;1!DOID:4418;7.82e-10;1!DOID:3603;7.82e-10;1!DOID:3112;1.68e-09;1|ontology_enrichment_disease_v019_2=DOID:0060085,6.31e-10,1;DOID:3165,6.31e-10,1;DOID:0060121,6.31e-10,1;DOID:2438,6.31e-10,1;DOID:4418,6.31e-10,1;DOID:3111,8.91e-10,1;DOID:3603,8.91e-10,1;DOID:3112,1.91e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002294;1.87e-11;7!UBERON:0001173;1.87e-11;7!UBERON:0004913;4.08e-10;1!UBERON:0003703;4.08e-10;1!UBERON:0001174;4.08e-10;1!UBERON:0004914;4.08e-10;1!UBERON:0004645;4.66e-10;1!UBERON:0001256;4.66e-10;1!UBERON:0001259;4.66e-10;1!UBERON:0002394;1.46e-09;4!UBERON:0003928;1.46e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.09e-10,1;UBERON:0003703,4.09e-10,1;UBERON:0001174,4.09e-10,1;UBERON:0004914,4.09e-10,1;UBERON:0004645,4.87e-10,1;UBERON:0001256,4.87e-10,1;UBERON:0001259,4.87e-10,1;UBERON:0002294,4.81e-09,9;UBERON:0001173,4.81e-09,9;UBERON:0004912,4.81e-09,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0.928896739896456,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,2.21598163412751,0.601633342410425,1.30206522429511,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0.918251677112708,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,1.10483290796269,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,1.71598473234038,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4246415373971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,1.73123055571734,0.142283686696828,0,0,0.5745161103971,0,0,0.280797178113459,0,0,0,0,0.321176150207399,0.201799707191048,0,1.03051603426729,0,0,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,3.13127361030843,0.211125408127993,0.19924798825107,0,0,0,1.23084805461069,0,2.06697207638852,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.568967241427498,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,1.13852239634511,0.476809736941136,0,0,0.706765357169704,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0.522355239482415,0,0,0,0,0.082115457053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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:49264178..49264182,+ | |||
|id=chr19:49264178..49264182,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.49e-09!172;CL:0000566!5.49e-09!172;CL:0000988!3.57e-08!182;CL:0000453!1.43e-07!5;CL:0002032!2.86e-07!165;CL:0000837!2.86e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.80e-18;2!CL:0001016;1.80e-18;2!CL:0000453;3.64e-16;5!CL:0000451;1.29e-12;10!CL:1001319;4.66e-10;1!CL:1000600;4.66e-10;1!CL:0002032;1.68e-09;1!CL:0000817;1.68e-09;1!CL:0000557;1.68e-09;1!CL:0000990;3.27e-09;8!CL:0000840;9.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.73e-18,2;CL:0001016,1.73e-18,2;CL:0000453,3.47e-16,5;CL:0000451,1.16e-12,10;CL:1001319,4.87e-10,1;CL:1000600,4.87e-10,1;CL:0000990,3.18e-09,8;CL:0000037,3.59e-07,168;CL:0000840,9.74e-07,5;CL:0001029,9.74e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.25e-13!239;DOID:162!1.04e-12!235;DOID:2531!4.71e-08!51;DOID:0060083!4.71e-08!51;DOID:0050687!4.85e-08!143;DOID:305!6.56e-08!106;DOID:1749!6.81e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.82e-10;1!DOID:3165;7.82e-10;1!DOID:0060121;7.82e-10;1!DOID:3111;7.82e-10;1!DOID:2438;7.82e-10;1!DOID:4418;7.82e-10;1!DOID:3603;7.82e-10;1!DOID:3112;1.68e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.31e-10,1;DOID:3165,6.31e-10,1;DOID:0060121,6.31e-10,1;DOID:2438,6.31e-10,1;DOID:4418,6.31e-10,1;DOID:3111,8.91e-10,1;DOID:3603,8.91e-10,1;DOID:3112,1.91e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.87e-11;7!UBERON:0001173;1.87e-11;7!UBERON:0004913;4.08e-10;1!UBERON:0003703;4.08e-10;1!UBERON:0001174;4.08e-10;1!UBERON:0004914;4.08e-10;1!UBERON:0004645;4.66e-10;1!UBERON:0001256;4.66e-10;1!UBERON:0001259;4.66e-10;1!UBERON:0002394;1.46e-09;4!UBERON:0003928;1.46e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.09e-10,1;UBERON:0003703,4.09e-10,1;UBERON:0001174,4.09e-10,1;UBERON:0004914,4.09e-10,1;UBERON:0004645,4.87e-10,1;UBERON:0001256,4.87e-10,1;UBERON:0001259,4.87e-10,1;UBERON:0002294,4.81e-09,9;UBERON:0001173,4.81e-09,9;UBERON:0004912,4.81e-09,9 | |||
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|short_description=p@chr19:49264178..49264182,+ | |||
}} |
Revision as of 21:40, 11 September 2013
Short description: | p@chr19:49264178..49264182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:49264178..49264182, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.73e-18 | 2 |
immature CD1a-positive Langerhans cell | 1.73e-18 | 2 |
Langerhans cell | 3.47e-16 | 5 |
dendritic cell | 1.16e-12 | 10 |
bladder cell | 4.87e-10 | 1 |
lower urinary tract cell | 4.87e-10 | 1 |
conventional dendritic cell | 3.18e-09 | 8 |
hematopoietic stem cell | 3.59e-07 | 168 |
immature conventional dendritic cell | 9.74e-07 | 5 |
common dendritic progenitor | 9.74e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.09e-10 | 1 |
extrahepatic bile duct | 4.09e-10 | 1 |
common bile duct | 4.09e-10 | 1 |
duodenal papilla | 4.09e-10 | 1 |
urinary bladder urothelium | 4.87e-10 | 1 |
wall of urinary bladder | 4.87e-10 | 1 |
mucosa of urinary bladder | 4.87e-10 | 1 |
biliary system | 4.81e-09 | 9 |
biliary tree | 4.81e-09 | 9 |
biliary bud | 4.81e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.31e-10 | 1 |
skin benign neoplasm | 6.31e-10 | 1 |
integumentary system benign neoplasm | 6.31e-10 | 1 |
dermis tumor | 6.31e-10 | 1 |
cutaneous fibrous histiocytoma | 6.31e-10 | 1 |
cystadenocarcinoma | 8.91e-10 | 1 |
mucinous cystadenocarcinoma | 8.91e-10 | 1 |
papillary adenocarcinoma | 1.91e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.