FFCP PHASE1:Hg19::chr19:42082506..42082556,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90273|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28834|TSSclassifier=S|UniProt=Q3KPI0|association_with_transcript=0bp_to_ENST00000457737,NM_001098506,NM_033543,uc002ore.3,uc002orf.2,uc002org.3_5end|description=CAGE_peak_3_at_CEACAM21_5end|id=chr19:42082506..42082556,+|ontology_enrichment_celltype=CL:0000037!9.83e-54!172;CL:0000566!9.83e-54!172;CL:0002032!1.89e-50!165;CL:0000837!1.89e-50!165;CL:0000988!9.41e-49!182;CL:0000738!1.13e-45!140;CL:0002087!7.21e-40!119;CL:0000763!2.83e-36!112;CL:0000049!2.83e-36!112;CL:0002031!8.32e-36!124;CL:0000766!4.03e-32!76;CL:0002194!4.12e-26!63;CL:0000576!4.12e-26!63;CL:0000040!4.12e-26!63;CL:0000559!4.12e-26!63;CL:0000839!6.40e-25!70;CL:0002009!1.23e-24!65;CL:0000557!3.00e-24!71;CL:0002057!3.51e-18!42;CL:0000860!9.59e-17!45;CL:0000542!2.76e-12!53;CL:0000051!2.76e-12!53;CL:0000838!5.67e-12!52;CL:0000945!1.86e-10!24;CL:0000826!1.86e-10!24;CL:0000236!3.01e-09!14;CL:0002393!7.45e-08!9;CL:0002397!7.45e-08!9;CL:0000094!2.02e-07!8|ontology_enrichment_celltype_v019=CL:0000576;2.22e-16;48!CL:0000766;2.62e-14;69!CL:0000763;2.16e-13;100!CL:0000473;2.26e-13;39!CL:0000234;2.26e-13;39!CL:0000235;1.76e-11;6!CL:0000094;2.29e-10;8!CL:0000236;2.27e-09;13!CL:0000738;6.27e-09;136!CL:0000860;9.35e-09;33!CL:0002057;9.35e-09;33!CL:0000988;8.72e-08;177!CL:0000081;3.62e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,2.20e-40,168;CL:0002032,9.60e-39,161;CL:0000837,9.60e-39,161;CL:0000763,4.81e-38,108;CL:0000049,4.81e-38,108;CL:0000988,3.47e-37,177;CL:0000766,6.13e-37,72;CL:0000738,3.29e-33,136;CL:0002194,3.85e-32,59;CL:0000576,3.85e-32,59;CL:0000040,3.85e-32,59;CL:0000559,3.85e-32,59;CL:0002009,1.06e-30,61;CL:0002087,1.10e-29,115;CL:0000839,1.76e-27,66;CL:0000557,6.76e-27,67;CL:0002031,1.72e-26,120;CL:0000473,2.47e-23,48;CL:0000234,2.47e-23,48;CL:0000860,8.26e-16,42;CL:0002057,8.26e-16,42;CL:0000235,1.57e-11,6;CL:0000094,1.69e-10,8;CL:0002393,3.46e-09,9;CL:0002397,3.46e-09,9;CL:0000236,2.18e-08,14;CL:0000134,2.66e-08,354;CL:0002320,8.52e-08,361;CL:0000081,2.94e-07,11|ontology_enrichment_development_v019=CL:0000049;9.30e-13;108!CL:0002057;8.06e-12;42|ontology_enrichment_disease=DOID:1240!2.36e-12!39;DOID:2531!4.89e-12!51;DOID:0060083!4.89e-12!51;DOID:8692!3.56e-10!31|ontology_enrichment_disease_v019=DOID:8692;1.18e-09;31!DOID:1240;8.87e-09;39|ontology_enrichment_disease_v019_2=DOID:1240,2.47e-10,39;DOID:8692,7.06e-10,31;DOID:2531,6.80e-09,51;DOID:0060083,6.80e-09,51|ontology_enrichment_uberon=UBERON:0002193!2.53e-31!112;UBERON:0002390!3.97e-31!102;UBERON:0003061!3.97e-31!102;UBERON:0002371!2.35e-21!80;UBERON:0002405!1.20e-19!115;UBERON:0007023!1.66e-18!115;UBERON:0001474!2.61e-18!86;UBERON:0004765!4.76e-13!101;UBERON:0001434!4.76e-13!101;UBERON:0000178!1.47e-07!15;UBERON:0000179!1.47e-07!15;UBERON:0000463!1.47e-07!15;UBERON:0003081!4.49e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-10;15!UBERON:0000179;1.05e-10;15!UBERON:0000463;1.05e-10;15!UBERON:0002390;2.54e-08;32!UBERON:0002193;4.94e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.91e-38,108;UBERON:0002390,7.28e-36,98;UBERON:0003061,7.28e-36,98;UBERON:0002405,4.67e-29,93;UBERON:0002371,2.42e-25,76;UBERON:0001474,1.35e-22,82;UBERON:0004765,1.61e-19,90;UBERON:0001434,2.14e-16,100;UBERON:0003081,1.41e-12,203;UBERON:0000178,1.32e-10,15;UBERON:0000179,1.32e-10,15;UBERON:0000463,1.32e-10,15;UBERON:0002384,1.70e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.865818594450472,3.14691421479123,1.91914699048606,0.619264493264304,0,0,0,0.697204805222715,0.142169232487422,1.76160263600908,1.10799081706375,0.601633342410425,0.868043482863407,3.58264758783879,8.42123531649347,4.89393578504954,3.19876125315042,0.755751887377619,3.63876091781724,1.62700325833979,0,0,2.58923153089935,1.5369642391746,0.709446689665756,0.344745680736619,0.645484683583826,1.35426486594342,1.12945403725563,1.36453075028923,0.898893937780338,0.918251677112708,0.641858054152187,0.639337125799041,4.94776950280074,1.59570926097305,3.83602275479425,0.580418477257168,1.13477044938228,0,1.7587406567972,0.521482918420201,1.3031330682307,0,0,0.632924774881769,4.64761629886272,4.889898899196,3.77385561915077,2.02191536063691,2.10247649978109,2.57160938715328,3.99017841237748,6.96208370196815,6.57590953552682,3.51992488922645,5.46138611262132,3.55803701545422,2.13365111283254,4.80475184443215,3.4485146397269,7.93253847341835,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0.393419540227666,1.17903228824749,0.205601498999509,2.50779743086017,0,1.4203434172042,0,4.2335973616366,3.53527088969805,0.886135578334485,1.89562704635511,4.61128751012431,3.90178042679635,1.15106533222573,0.276350017785848,2.60822777161547,1.18629250529648,0,0,1.81294948316106,0.766440987203842,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.752875595388864,0.639933055772092,0,1.1838862602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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28834 | |||
|TSSclassifier=S | |||
|UniProt=Q3KPI0 | |||
|association_with_transcript=0bp_to_ENST00000457737,NM_001098506,NM_033543,uc002ore.3,uc002orf.2,uc002org.3_5end | |||
|description=CAGE_peak_3_at_CEACAM21_5end | |||
|id=chr19:42082506..42082556,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.83e-54!172;CL:0000566!9.83e-54!172;CL:0002032!1.89e-50!165;CL:0000837!1.89e-50!165;CL:0000988!9.41e-49!182;CL:0000738!1.13e-45!140;CL:0002087!7.21e-40!119;CL:0000763!2.83e-36!112;CL:0000049!2.83e-36!112;CL:0002031!8.32e-36!124;CL:0000766!4.03e-32!76;CL:0002194!4.12e-26!63;CL:0000576!4.12e-26!63;CL:0000040!4.12e-26!63;CL:0000559!4.12e-26!63;CL:0000839!6.40e-25!70;CL:0002009!1.23e-24!65;CL:0000557!3.00e-24!71;CL:0002057!3.51e-18!42;CL:0000860!9.59e-17!45;CL:0000542!2.76e-12!53;CL:0000051!2.76e-12!53;CL:0000838!5.67e-12!52;CL:0000945!1.86e-10!24;CL:0000826!1.86e-10!24;CL:0000236!3.01e-09!14;CL:0002393!7.45e-08!9;CL:0002397!7.45e-08!9;CL:0000094!2.02e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.22e-16;48!CL:0000766;2.62e-14;69!CL:0000763;2.16e-13;100!CL:0000473;2.26e-13;39!CL:0000234;2.26e-13;39!CL:0000235;1.76e-11;6!CL:0000094;2.29e-10;8!CL:0000236;2.27e-09;13!CL:0000738;6.27e-09;136!CL:0000860;9.35e-09;33!CL:0002057;9.35e-09;33!CL:0000988;8.72e-08;177!CL:0000081;3.62e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.20e-40,168;CL:0002032,9.60e-39,161;CL:0000837,9.60e-39,161;CL:0000763,4.81e-38,108;CL:0000049,4.81e-38,108;CL:0000988,3.47e-37,177;CL:0000766,6.13e-37,72;CL:0000738,3.29e-33,136;CL:0002194,3.85e-32,59;CL:0000576,3.85e-32,59;CL:0000040,3.85e-32,59;CL:0000559,3.85e-32,59;CL:0002009,1.06e-30,61;CL:0002087,1.10e-29,115;CL:0000839,1.76e-27,66;CL:0000557,6.76e-27,67;CL:0002031,1.72e-26,120;CL:0000473,2.47e-23,48;CL:0000234,2.47e-23,48;CL:0000860,8.26e-16,42;CL:0002057,8.26e-16,42;CL:0000235,1.57e-11,6;CL:0000094,1.69e-10,8;CL:0002393,3.46e-09,9;CL:0002397,3.46e-09,9;CL:0000236,2.18e-08,14;CL:0000134,2.66e-08,354;CL:0002320,8.52e-08,361;CL:0000081,2.94e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000049;9.30e-13;108!CL:0002057;8.06e-12;42 | |||
|ontology_enrichment_disease=DOID:1240!2.36e-12!39;DOID:2531!4.89e-12!51;DOID:0060083!4.89e-12!51;DOID:8692!3.56e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.18e-09;31!DOID:1240;8.87e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.47e-10,39;DOID:8692,7.06e-10,31;DOID:2531,6.80e-09,51;DOID:0060083,6.80e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.53e-31!112;UBERON:0002390!3.97e-31!102;UBERON:0003061!3.97e-31!102;UBERON:0002371!2.35e-21!80;UBERON:0002405!1.20e-19!115;UBERON:0007023!1.66e-18!115;UBERON:0001474!2.61e-18!86;UBERON:0004765!4.76e-13!101;UBERON:0001434!4.76e-13!101;UBERON:0000178!1.47e-07!15;UBERON:0000179!1.47e-07!15;UBERON:0000463!1.47e-07!15;UBERON:0003081!4.49e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-10;15!UBERON:0000179;1.05e-10;15!UBERON:0000463;1.05e-10;15!UBERON:0002390;2.54e-08;32!UBERON:0002193;4.94e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.91e-38,108;UBERON:0002390,7.28e-36,98;UBERON:0003061,7.28e-36,98;UBERON:0002405,4.67e-29,93;UBERON:0002371,2.42e-25,76;UBERON:0001474,1.35e-22,82;UBERON:0004765,1.61e-19,90;UBERON:0001434,2.14e-16,100;UBERON:0003081,1.41e-12,203;UBERON:0000178,1.32e-10,15;UBERON:0000179,1.32e-10,15;UBERON:0000463,1.32e-10,15;UBERON:0002384,1.70e-07,371 | |||
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| |||
|short_description=p3@CEACAM21 | |||
}} |
Revision as of 20:50, 11 September 2013
Short description: | p3@CEACAM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CEACAM21_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457737, NM_001098506, NM_033543, uc002ore.3, uc002orf.2, uc002org.3_5end |
EntrezGene: | CEACAM21 |
HGNC: | 28834 |
UniProt: | Q3KPI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.20e-40 | 168 |
hematopoietic oligopotent progenitor cell | 9.60e-39 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-39 | 161 |
myeloid cell | 4.81e-38 | 108 |
common myeloid progenitor | 4.81e-38 | 108 |
hematopoietic cell | 3.47e-37 | 177 |
myeloid leukocyte | 6.13e-37 | 72 |
leukocyte | 3.29e-33 | 136 |
monopoietic cell | 3.85e-32 | 59 |
monocyte | 3.85e-32 | 59 |
monoblast | 3.85e-32 | 59 |
promonocyte | 3.85e-32 | 59 |
macrophage dendritic cell progenitor | 1.06e-30 | 61 |
nongranular leukocyte | 1.10e-29 | 115 |
myeloid lineage restricted progenitor cell | 1.76e-27 | 66 |
granulocyte monocyte progenitor cell | 6.76e-27 | 67 |
hematopoietic lineage restricted progenitor cell | 1.72e-26 | 120 |
defensive cell | 2.47e-23 | 48 |
phagocyte | 2.47e-23 | 48 |
classical monocyte | 8.26e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.26e-16 | 42 |
macrophage | 1.57e-11 | 6 |
granulocyte | 1.69e-10 | 8 |
intermediate monocyte | 3.46e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.46e-09 | 9 |
B cell | 2.18e-08 | 14 |
mesenchymal cell | 2.66e-08 | 354 |
connective tissue cell | 8.52e-08 | 361 |
blood cell | 2.94e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.91e-38 | 108 |
hematopoietic system | 7.28e-36 | 98 |
blood island | 7.28e-36 | 98 |
immune system | 4.67e-29 | 93 |
bone marrow | 2.42e-25 | 76 |
bone element | 1.35e-22 | 82 |
skeletal element | 1.61e-19 | 90 |
skeletal system | 2.14e-16 | 100 |
lateral plate mesoderm | 1.41e-12 | 203 |
blood | 1.32e-10 | 15 |
haemolymphatic fluid | 1.32e-10 | 15 |
organism substance | 1.32e-10 | 15 |
connective tissue | 1.70e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.47e-10 | 39 |
myeloid leukemia | 7.06e-10 | 31 |
hematologic cancer | 6.80e-09 | 51 |
immune system cancer | 6.80e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.