FFCP PHASE1:Hg19::chr19:36443560..36443561,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C358|description=CAGE_peak_at_chr19:36443560..36443561,+|id=chr19:36443560..36443561,+|ontology_enrichment_celltype=CL:0002127!1.54e-07!1;CL:0000914!1.54e-07!1;CL:0000911!1.54e-07!1;CL:0000814!1.54e-07!1;CL:0002042!1.54e-07!1;CL:0002039!1.54e-07!1;CL:0002040!1.54e-07!1;CL:0002041!1.54e-07!1|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.80e-41!57;UBERON:0005068!7.80e-41!57;UBERON:0006241!7.80e-41!57;UBERON:0007135!7.80e-41!57;UBERON:0002616!2.43e-39!59;UBERON:0002020!8.53e-39!34;UBERON:0003528!8.53e-39!34;UBERON:0000955!1.25e-32!69;UBERON:0006238!1.25e-32!69;UBERON:0002780!5.18e-32!41;UBERON:0001890!5.18e-32!41;UBERON:0006240!5.18e-32!41;UBERON:0003080!3.38e-31!42;UBERON:0001017!5.92e-30!82;UBERON:0002791!6.14e-30!33;UBERON:0001893!5.19e-29!34;UBERON:0003075!9.17e-29!86;UBERON:0007284!9.17e-29!86;UBERON:0005743!2.11e-28!86;UBERON:0000073!4.77e-28!94;UBERON:0001016!4.77e-28!94;UBERON:0002346!2.57e-27!90;UBERON:0001869!2.43e-26!32;UBERON:0002308!3.08e-25!9;UBERON:0000125!3.08e-25!9;UBERON:0002619!9.54e-22!22;UBERON:0007023!9.77e-21!115;UBERON:0003056!1.02e-20!61;UBERON:0006331!1.24e-19!3;UBERON:0002298!1.49e-19!8;UBERON:0000988!1.83e-19!3;UBERON:0000956!4.51e-19!25;UBERON:0000203!4.51e-19!25;UBERON:0001950!7.33e-19!20;UBERON:0002420!5.17e-18!9;UBERON:0007245!5.17e-18!9;UBERON:0010009!5.17e-18!9;UBERON:0010011!5.17e-18!9;UBERON:0000454!5.17e-18!9;UBERON:0000153!1.15e-17!129;UBERON:0007811!1.15e-17!129;UBERON:0000033!8.49e-17!123;UBERON:0004121!1.84e-15!169;UBERON:0009663!5.08e-15!7;UBERON:0000924!5.24e-15!173;UBERON:0006601!5.24e-15!173;UBERON:0002148!9.79e-14!2;UBERON:0009662!9.79e-14!2;UBERON:0004733!2.98e-13!12;UBERON:0002028!2.98e-13!12;UBERON:0007277!2.98e-13!12;UBERON:0001872!3.16e-12!5;UBERON:0004732!3.22e-12!13;UBERON:0000025!8.50e-12!194;UBERON:0002680!1.13e-11!9;UBERON:0001895!1.13e-11!9;UBERON:0010092!1.13e-11!9;UBERON:0003076!1.45e-10!15;UBERON:0003057!1.45e-10!15;UBERON:0002771!6.55e-10!3;UBERON:0000064!7.04e-10!219;UBERON:0005383!1.57e-09!3;UBERON:0005382!1.57e-09!3;UBERON:0004111!1.18e-08!241;UBERON:0001871!4.02e-08!7;UBERON:0002171!5.33e-08!1;UBERON:0006518!5.33e-08!1;UBERON:0008949!5.33e-08!1;UBERON:0000101!5.33e-08!1;UBERON:0002167!5.33e-08!1;UBERON:0002146!9.72e-08!1;UBERON:0005623!9.72e-08!1;UBERON:0001874!1.18e-07!1;UBERON:0002038!1.26e-07!1;UBERON:0009661!1.26e-07!1;UBERON:0002902!1.75e-07!1;UBERON:0009899!1.75e-07!1;UBERON:0000477!1.85e-07!286;UBERON:0000483!2.17e-07!309;UBERON:0000369!2.35e-07!4;UBERON:0002435!2.35e-07!4;UBERON:0000204!2.35e-07!4;UBERON:0010082!2.35e-07!4;UBERON:0000119!2.84e-07!312|ontology_enrichment_uberon_v019=UBERON:0002021;1.60e-14;5!UBERON:0002037;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0001264;6.13e-08;10!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.83e-14,5;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001264,6.13e-08,10;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,1.76926815889959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C358 | |||
|description=CAGE_peak_at_chr19:36443560..36443561,+ | |||
|id=chr19:36443560..36443561,+ | |||
|ontology_enrichment_celltype=CL:0002127!1.54e-07!1;CL:0000914!1.54e-07!1;CL:0000911!1.54e-07!1;CL:0000814!1.54e-07!1;CL:0002042!1.54e-07!1;CL:0002039!1.54e-07!1;CL:0002040!1.54e-07!1;CL:0002041!1.54e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.80e-41!57;UBERON:0005068!7.80e-41!57;UBERON:0006241!7.80e-41!57;UBERON:0007135!7.80e-41!57;UBERON:0002616!2.43e-39!59;UBERON:0002020!8.53e-39!34;UBERON:0003528!8.53e-39!34;UBERON:0000955!1.25e-32!69;UBERON:0006238!1.25e-32!69;UBERON:0002780!5.18e-32!41;UBERON:0001890!5.18e-32!41;UBERON:0006240!5.18e-32!41;UBERON:0003080!3.38e-31!42;UBERON:0001017!5.92e-30!82;UBERON:0002791!6.14e-30!33;UBERON:0001893!5.19e-29!34;UBERON:0003075!9.17e-29!86;UBERON:0007284!9.17e-29!86;UBERON:0005743!2.11e-28!86;UBERON:0000073!4.77e-28!94;UBERON:0001016!4.77e-28!94;UBERON:0002346!2.57e-27!90;UBERON:0001869!2.43e-26!32;UBERON:0002308!3.08e-25!9;UBERON:0000125!3.08e-25!9;UBERON:0002619!9.54e-22!22;UBERON:0007023!9.77e-21!115;UBERON:0003056!1.02e-20!61;UBERON:0006331!1.24e-19!3;UBERON:0002298!1.49e-19!8;UBERON:0000988!1.83e-19!3;UBERON:0000956!4.51e-19!25;UBERON:0000203!4.51e-19!25;UBERON:0001950!7.33e-19!20;UBERON:0002420!5.17e-18!9;UBERON:0007245!5.17e-18!9;UBERON:0010009!5.17e-18!9;UBERON:0010011!5.17e-18!9;UBERON:0000454!5.17e-18!9;UBERON:0000153!1.15e-17!129;UBERON:0007811!1.15e-17!129;UBERON:0000033!8.49e-17!123;UBERON:0004121!1.84e-15!169;UBERON:0009663!5.08e-15!7;UBERON:0000924!5.24e-15!173;UBERON:0006601!5.24e-15!173;UBERON:0002148!9.79e-14!2;UBERON:0009662!9.79e-14!2;UBERON:0004733!2.98e-13!12;UBERON:0002028!2.98e-13!12;UBERON:0007277!2.98e-13!12;UBERON:0001872!3.16e-12!5;UBERON:0004732!3.22e-12!13;UBERON:0000025!8.50e-12!194;UBERON:0002680!1.13e-11!9;UBERON:0001895!1.13e-11!9;UBERON:0010092!1.13e-11!9;UBERON:0003076!1.45e-10!15;UBERON:0003057!1.45e-10!15;UBERON:0002771!6.55e-10!3;UBERON:0000064!7.04e-10!219;UBERON:0005383!1.57e-09!3;UBERON:0005382!1.57e-09!3;UBERON:0004111!1.18e-08!241;UBERON:0001871!4.02e-08!7;UBERON:0002171!5.33e-08!1;UBERON:0006518!5.33e-08!1;UBERON:0008949!5.33e-08!1;UBERON:0000101!5.33e-08!1;UBERON:0002167!5.33e-08!1;UBERON:0002146!9.72e-08!1;UBERON:0005623!9.72e-08!1;UBERON:0001874!1.18e-07!1;UBERON:0002038!1.26e-07!1;UBERON:0009661!1.26e-07!1;UBERON:0002902!1.75e-07!1;UBERON:0009899!1.75e-07!1;UBERON:0000477!1.85e-07!286;UBERON:0000483!2.17e-07!309;UBERON:0000369!2.35e-07!4;UBERON:0002435!2.35e-07!4;UBERON:0000204!2.35e-07!4;UBERON:0010082!2.35e-07!4;UBERON:0000119!2.84e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.60e-14;5!UBERON:0002037;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0001264;6.13e-08;10!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.83e-14,5;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001264,6.13e-08,10;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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|short_description=p@chr19:36443560..36443561,+ | |||
}} |
Revision as of 20:17, 11 September 2013
Short description: | p@chr19:36443560..36443561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:36443560..36443561, + |
Coexpression cluster: | C358_cerebellum_middle_occipital_parietal_pineal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.83e-14 | 5 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
pancreas | 6.13e-08 | 10 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.