FFCP PHASE1:Hg19::chr19:35800979..35801026,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4099|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6783|TSSclassifier=W|UniProt=Q15489|association_with_transcript=-484bp_to_X98405_5end|description=CAGE_peak_3_at_MAG_5end|id=chr19:35800979..35801026,+|ontology_enrichment_celltype=CL:0002541!1.39e-09!3|ontology_enrichment_celltype_v019=CL:0002541;7.29e-17;3|ontology_enrichment_celltype_v019_2=CL:0002541,8.55e-17,3|ontology_enrichment_development_v019=UBERON:0005425;2.78e-13;1!UBERON:0006222;6.42e-13;1!UBERON:0007297;4.29e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;5.39e-14;8|ontology_enrichment_disease_v019_2=DOID:1036,4.43e-14,8|ontology_enrichment_uberon=UBERON:0007023!5.78e-38!115;UBERON:0001049!2.41e-27!57;UBERON:0005068!2.41e-27!57;UBERON:0006241!2.41e-27!57;UBERON:0007135!2.41e-27!57;UBERON:0002616!5.79e-20!59;UBERON:0005743!6.23e-20!86;UBERON:0001017!1.02e-19!82;UBERON:0000955!3.11e-19!69;UBERON:0006238!3.11e-19!69;UBERON:0000073!7.58e-19!94;UBERON:0001016!7.58e-19!94;UBERON:0003075!1.74e-18!86;UBERON:0007284!1.74e-18!86;UBERON:0002346!2.54e-17!90;UBERON:0002780!4.01e-17!41;UBERON:0001890!4.01e-17!41;UBERON:0006240!4.01e-17!41;UBERON:0003080!1.31e-16!42;UBERON:0002298!3.34e-15!8;UBERON:0002020!1.15e-14!34;UBERON:0003528!1.15e-14!34;UBERON:0001893!1.97e-14!34;UBERON:0002791!3.99e-13!33;UBERON:0003076!1.23e-12!15;UBERON:0003057!1.23e-12!15;UBERON:0001869!1.84e-11!32;UBERON:0003056!2.64e-11!61;UBERON:0002308!6.10e-10!9;UBERON:0000125!6.10e-10!9;UBERON:0000033!1.12e-09!123;UBERON:0000476!1.39e-09!3;UBERON:0000920!1.39e-09!3;UBERON:0004732!5.06e-09!13;UBERON:0002619!5.50e-09!22;UBERON:0002240!5.77e-09!3;UBERON:0006331!5.93e-09!3;UBERON:0000153!6.46e-09!129;UBERON:0007811!6.46e-09!129;UBERON:0004121!1.50e-08!169;UBERON:0000988!2.04e-08!3;UBERON:0001896!2.64e-08!3;UBERON:0005290!2.64e-08!3;UBERON:0010096!2.64e-08!3;UBERON:0000924!3.54e-08!173;UBERON:0006601!3.54e-08!173;UBERON:0001950!4.51e-08!20;UBERON:0000025!7.88e-08!194;UBERON:0000956!1.01e-07!25;UBERON:0000203!1.01e-07!25;UBERON:0004733!3.71e-07!12;UBERON:0002028!3.71e-07!12;UBERON:0007277!3.71e-07!12;UBERON:0000062!7.71e-07!511;UBERON:0003124!8.69e-07!7;UBERON:0000477!8.98e-07!286;UBERON:0004111!9.25e-07!241|ontology_enrichment_uberon_v019=UBERON:0003124;7.29e-17;3!UBERON:0000920;7.29e-17;3!UBERON:0000941;2.78e-13;1!UBERON:0001785;2.78e-13;1!UBERON:0002464;2.78e-13;1!UBERON:0004904;2.78e-13;1!UBERON:0001021;2.78e-13;1!UBERON:0001301;6.42e-13;1!UBERON:0003714;2.82e-07;2!UBERON:0005162;2.82e-07;2!UBERON:0000122;2.82e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.55e-17,3;UBERON:0000941,2.62e-13,1;UBERON:0001785,2.62e-13,1;UBERON:0002464,2.62e-13,1;UBERON:0004904,2.62e-13,1;UBERON:0001021,2.62e-13,1;UBERON:0003902,2.62e-13,1;UBERON:0005425,2.62e-13,1;UBERON:0001301,5.38e-13,1;UBERON:0003124,1.02e-07,7;UBERON:0003714,2.74e-07,2;UBERON:0005162,2.74e-07,2;UBERON:0000122,2.74e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,2.90799823828566,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,1.16684937732704,0.108647371922008,0.957003479195758,2.83952539545773,2.66517388009317,0,0,0,3.38393490925771,1.9606253431774,3.69207491346854,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.337005664903385,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0.126621591911757,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,1.1468183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6783 | |||
|TSSclassifier=W | |||
|UniProt=Q15489 | |||
|association_with_transcript=-484bp_to_X98405_5end | |||
|description=CAGE_peak_3_at_MAG_5end | |||
|id=chr19:35800979..35801026,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.39e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.29e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.55e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.78e-13;1!UBERON:0006222;6.42e-13;1!UBERON:0007297;4.29e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;5.39e-14;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.43e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.78e-38!115;UBERON:0001049!2.41e-27!57;UBERON:0005068!2.41e-27!57;UBERON:0006241!2.41e-27!57;UBERON:0007135!2.41e-27!57;UBERON:0002616!5.79e-20!59;UBERON:0005743!6.23e-20!86;UBERON:0001017!1.02e-19!82;UBERON:0000955!3.11e-19!69;UBERON:0006238!3.11e-19!69;UBERON:0000073!7.58e-19!94;UBERON:0001016!7.58e-19!94;UBERON:0003075!1.74e-18!86;UBERON:0007284!1.74e-18!86;UBERON:0002346!2.54e-17!90;UBERON:0002780!4.01e-17!41;UBERON:0001890!4.01e-17!41;UBERON:0006240!4.01e-17!41;UBERON:0003080!1.31e-16!42;UBERON:0002298!3.34e-15!8;UBERON:0002020!1.15e-14!34;UBERON:0003528!1.15e-14!34;UBERON:0001893!1.97e-14!34;UBERON:0002791!3.99e-13!33;UBERON:0003076!1.23e-12!15;UBERON:0003057!1.23e-12!15;UBERON:0001869!1.84e-11!32;UBERON:0003056!2.64e-11!61;UBERON:0002308!6.10e-10!9;UBERON:0000125!6.10e-10!9;UBERON:0000033!1.12e-09!123;UBERON:0000476!1.39e-09!3;UBERON:0000920!1.39e-09!3;UBERON:0004732!5.06e-09!13;UBERON:0002619!5.50e-09!22;UBERON:0002240!5.77e-09!3;UBERON:0006331!5.93e-09!3;UBERON:0000153!6.46e-09!129;UBERON:0007811!6.46e-09!129;UBERON:0004121!1.50e-08!169;UBERON:0000988!2.04e-08!3;UBERON:0001896!2.64e-08!3;UBERON:0005290!2.64e-08!3;UBERON:0010096!2.64e-08!3;UBERON:0000924!3.54e-08!173;UBERON:0006601!3.54e-08!173;UBERON:0001950!4.51e-08!20;UBERON:0000025!7.88e-08!194;UBERON:0000956!1.01e-07!25;UBERON:0000203!1.01e-07!25;UBERON:0004733!3.71e-07!12;UBERON:0002028!3.71e-07!12;UBERON:0007277!3.71e-07!12;UBERON:0000062!7.71e-07!511;UBERON:0003124!8.69e-07!7;UBERON:0000477!8.98e-07!286;UBERON:0004111!9.25e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.29e-17;3!UBERON:0000920;7.29e-17;3!UBERON:0000941;2.78e-13;1!UBERON:0001785;2.78e-13;1!UBERON:0002464;2.78e-13;1!UBERON:0004904;2.78e-13;1!UBERON:0001021;2.78e-13;1!UBERON:0001301;6.42e-13;1!UBERON:0003714;2.82e-07;2!UBERON:0005162;2.82e-07;2!UBERON:0000122;2.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.55e-17,3;UBERON:0000941,2.62e-13,1;UBERON:0001785,2.62e-13,1;UBERON:0002464,2.62e-13,1;UBERON:0004904,2.62e-13,1;UBERON:0001021,2.62e-13,1;UBERON:0003902,2.62e-13,1;UBERON:0005425,2.62e-13,1;UBERON:0001301,5.38e-13,1;UBERON:0003124,1.02e-07,7;UBERON:0003714,2.74e-07,2;UBERON:0005162,2.74e-07,2;UBERON:0000122,2.74e-07,2 | |||
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|short_description=p3@MAG | |||
}} |
Revision as of 20:09, 11 September 2013
Short description: | p3@MAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MAG_5end |
Coexpression cluster: | NA |
Association with transcript: | -484bp_to_X98405_5end |
EntrezGene: | MAG |
HGNC: | 6783 |
UniProt: | Q15489 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.55e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.55e-17 | 3 |
cranial nerve II | 2.62e-13 | 1 |
cranial nerve | 2.62e-13 | 1 |
nerve trunk | 2.62e-13 | 1 |
nerve connecting eye with brain | 2.62e-13 | 1 |
nerve | 2.62e-13 | 1 |
retinal neural layer | 2.62e-13 | 1 |
presumptive neural retina | 2.62e-13 | 1 |
epididymis | 5.38e-13 | 1 |
chorion | 1.02e-07 | 7 |
neural tissue | 2.74e-07 | 2 |
multi cell component structure | 2.74e-07 | 2 |
neuron projection bundle | 2.74e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.43e-14 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.