FFCP PHASE1:Hg19::chr19:35651604..35651633,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3778 | |||
|description=CAGE_peak_at_chr19:35651604..35651633,+ | |||
|id=chr19:35651604..35651633,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-19!42;CL:0000766!4.74e-19!76;CL:0000860!4.95e-19!45;CL:0002032!1.97e-18!165;CL:0000837!1.97e-18!165;CL:0000557!3.66e-18!71;CL:0000037!3.90e-18!172;CL:0000566!3.90e-18!172;CL:0000839!1.34e-17!70;CL:0000763!1.82e-17!112;CL:0000049!1.82e-17!112;CL:0000738!5.08e-17!140;CL:0002031!7.52e-17!124;CL:0002194!3.19e-16!63;CL:0000576!3.19e-16!63;CL:0000040!3.19e-16!63;CL:0000559!3.19e-16!63;CL:0002087!3.85e-16!119;CL:0002009!5.24e-16!65;CL:0000988!6.06e-16!182;CL:0000003!3.45e-14!722;CL:0000134!2.40e-11!358;CL:0000034!3.22e-11!444;CL:0000063!3.43e-11!578;CL:0000144!4.96e-11!625;CL:0000048!6.84e-11!430;CL:0000723!7.60e-11!436;CL:0002320!1.38e-10!365;CL:0000012!1.36e-09!682;CL:0000548!1.54e-09!679;CL:0000004!1.54e-09!679;CL:0000255!1.54e-09!679;CL:0000219!3.49e-09!390;CL:0002371!4.19e-09!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-25;33!CL:0002057;2.00e-25;33!CL:0000473;1.99e-21;39!CL:0000234;1.99e-21;39!CL:0000576;1.05e-13;48!CL:0000766;2.69e-13;69!CL:0000763;2.21e-08;100!CL:0000097;8.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.49e-28,48;CL:0000234,9.49e-28,48;CL:0000860,4.00e-27,42;CL:0002057,4.00e-27,42;CL:0000766,3.95e-25,72;CL:0000839,6.07e-24,66;CL:0000557,2.64e-23,67;CL:0002194,7.56e-21,59;CL:0000576,7.56e-21,59;CL:0000040,7.56e-21,59;CL:0000559,7.56e-21,59;CL:0000763,1.03e-20,108;CL:0000049,1.03e-20,108;CL:0002009,1.26e-19,61;CL:0002032,5.79e-19,161;CL:0000837,5.79e-19,161;CL:0000037,8.63e-19,168;CL:0002031,1.32e-18,120;CL:0000738,1.44e-18,136;CL:0000988,6.30e-17,177;CL:0002087,1.17e-16,115;CL:0000134,4.12e-09,354;CL:0000048,8.77e-09,427;CL:0000723,9.25e-09,433;CL:0000034,1.20e-08,441;CL:0002320,1.40e-08,361;CL:0000219,7.22e-07,386;CL:0000097,9.49e-07,5;CL:0002028,9.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.46e-20;42!CL:0000049;2.33e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.23e-15!80;UBERON:0002390!1.39e-14!102;UBERON:0003061!1.39e-14!102;UBERON:0001474!1.47e-14!86;UBERON:0003081!1.44e-13!216;UBERON:0002193!2.97e-13!112;UBERON:0004765!7.16e-10!101;UBERON:0001434!7.16e-10!101;UBERON:0002384!2.14e-09!375;UBERON:0002405!6.39e-08!115;UBERON:0002204!1.16e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.79e-20,76;UBERON:0001474,4.43e-18,82;UBERON:0002390,3.99e-17,98;UBERON:0003061,3.99e-17,98;UBERON:0002405,6.82e-17,93;UBERON:0002193,4.42e-16,108;UBERON:0004765,1.87e-15,90;UBERON:0003081,3.77e-14,203;UBERON:0001434,3.59e-12,100;UBERON:0002204,5.04e-09,167;UBERON:0002384,6.98e-08,371;UBERON:0000926,3.19e-07,315;UBERON:0004120,3.19e-07,315;UBERON:0006603,3.19e-07,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0.655324116390517,3.4289707169699,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,1.22400414746552,0,0,0.273748850145768,0.125542639594803,0.458480434487708,0.656804715599566,0.865818594450472,0.786728553697808,1.15148819429164,0.464448369948228,0,0.30120591877825,0.739508020333575,0,0,0.293600439334847,0,1.40381113229099,1.30206522429511,0.447830948479849,0.647787332037959,0.257575567634187,3.05336301437086,5.66813915533214,2.66842467306598,6.50801303335917,5.34518254428373,4.33588919253145,3.45230870786581,4.09857130446561,2.36482229888585,2.06847408441971,1.93645405075148,1.35426486594342,5.27078550719293,9.00590295190891,2.69668181334102,3.97909060082173,3.85114832491312,3.83602275479425,5.27762080298746,4.58766412529753,4.26224750532694,5.80418477257168,3.40431134814684,4.9825779919646,4.52247597462138,3.12889751052121,4.12658804939722,4.84319602106695,3.68277635987565,2.84816148696796,1.90129757680748,1.06302149982522,0.838634582033504,1.12328631146495,0.901061357049038,1.6072558669708,1.42506371870624,2.38700012638908,0.547992461293902,1.75996244461323,1.09227722252426,0.889509253863555,0,0,1.14950487990897,1.98313461835459,2.86216126360609,0.569212969109448,1.17447437874188,2.29363936875137,2.64342657158052,0,0.263384084775077,1.57367816091066,1.57204305099666,4.31763147898969,3.17654341242288,0.651844533267181,0.946895611469467,3.89653456815823,3.67654507721073,1.17842362989935,2.65840673500345,1.89562704635511,2.17755243533648,1.95089021339817,1.64437904603676,3.59255023121603,3.76744011455568,1.63115219478266,0.802622484269139,4.18142095219907,1.47302145506836,1.14966148080576,2.74901956386104,2.02415753615602,0.637130828648193,0,0.950452044448374,1.05402583354441,1.15187950038977,0,1.4206635122641,0.821127996921047,0.403213486449465,2.13952156626806,2.17236605824198,2.43806866313962,1.34140171940727,0,1.0843174571537,0,0.434539556882471,2.3858578411533,1.45990461090791,0.189069634328136,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0.649094787309367,0.348259474598534,1.46253756570752,0.476981248610684,1.14398982156026,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,1.67799774483962,1.37559020970034,1.25396979922086,0.258416759169329,0.35576626268671,0,1.20848795132744,0,0.488124115096339,1.10298924103761,0.81014194788176,0.625098097988558,0.22452937262617,0.563057402416611,1.53316637465883,1.89853131913626,1.83201743930407,0,3.87780264148325,0.436094052142534,0.496971951695318,0.759783069987479,0,2.58152958673932,0.709336764396714,1.12135520028461,0,1.72667283892012,0.622422070799533,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0,1.71141546463335,0.896692083310806,0.939475989150119,0,0.280901613404497,0.204154171254893,0.491337269247072,0.826606249406124,0,0.989067717114227,0,2.15585442544872,0.673344455816265,0.250237039743928,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,2.15267562826634,0.213557388818567,0.635795703478686,2.40072876867522,0.721367704669072,1.03056216018252,1.48893485065272,0.843881661206331,0.487185025805993,2.77677151668526,0.828449087780694,1.13152239773168,2.4850671476163,0.604512589365842,1.18692414617341,1.93260853163297,0.818238361772504,1.43402297694502,0.731842236777572,0.530119073285941,0.813357600086629,0.518305275076852,1.26160425437814,0,1.56449532329816,1.28648187638577,8.28809528114883,1.39310378409594,0,1.0647612003586,1.34867752062481,0.964044119533928,1.21323370005633,0.653638332277218,1.42362371466658,0.943819157121151,1.56977172100277,1.15424147083917,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.658501712451753,1.1240175325762,0.502644862058154,1.38882667737794,0.325808305310325,0,0,0,0.234817388471643,0,0.462985512576611,1.52203321787679,0,0,0.738651018262192,0.468008530278475,1.18904929830983,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,14.7798971368783,6.0753419469126,4.35389042635621,5.04419836959365,6.312121671319,0.126995788584338,0.763976851116555,2.34434894420094,1.71072446022705,0.308482478109971,0.901029173531752,0.571652865261156,0.560655421726804,0,0.4400297149257,1.03417372606222,0,3.381211010224,0.531876233169741,0,0,1.41849132023278,1.0656887160644,0.142977993658148,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0,0.899756920638513,2.43247561282381,2.51128545716063,2.10833939483032,0.479249710983165,1.14861935834114,0,0,0.821905290201534,0.716243852959582,1.12085143993527,0.394061520403854,1.94064817373566,1.15508732651774,0,0,0,0,0,0,2.99161459204025,1.65766205374414,0.24538298343828,1.00034104211935,0.271265023699736,1.45579603071565,2.14114786556594,2.36553622550902,0.937131319941706,0.300946099727719,0,0,0,0.184369168541703,1.47702144595741,0.587403472388222,0,0.82707210449155,1.2942852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| |||
|short_description=p@chr19:35651604..35651633,+ | |||
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Revision as of 20:06, 11 September 2013
Short description: | p@chr19:35651604..35651633, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:35651604..35651633, + |
Coexpression cluster: | C3778_Mast_Hair_CD14_CD4_Smooth_Melanocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.49e-28 | 48 |
phagocyte | 9.49e-28 | 48 |
classical monocyte | 4.00e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-27 | 42 |
myeloid leukocyte | 3.95e-25 | 72 |
myeloid lineage restricted progenitor cell | 6.07e-24 | 66 |
granulocyte monocyte progenitor cell | 2.64e-23 | 67 |
monopoietic cell | 7.56e-21 | 59 |
monocyte | 7.56e-21 | 59 |
monoblast | 7.56e-21 | 59 |
promonocyte | 7.56e-21 | 59 |
myeloid cell | 1.03e-20 | 108 |
common myeloid progenitor | 1.03e-20 | 108 |
macrophage dendritic cell progenitor | 1.26e-19 | 61 |
hematopoietic oligopotent progenitor cell | 5.79e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.79e-19 | 161 |
hematopoietic stem cell | 8.63e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.32e-18 | 120 |
leukocyte | 1.44e-18 | 136 |
hematopoietic cell | 6.30e-17 | 177 |
nongranular leukocyte | 1.17e-16 | 115 |
mesenchymal cell | 4.12e-09 | 354 |
multi fate stem cell | 8.77e-09 | 427 |
somatic stem cell | 9.25e-09 | 433 |
stem cell | 1.20e-08 | 441 |
connective tissue cell | 1.40e-08 | 361 |
motile cell | 7.22e-07 | 386 |
mast cell | 9.49e-07 | 5 |
basophil mast progenitor cell | 9.49e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.79e-20 | 76 |
bone element | 4.43e-18 | 82 |
hematopoietic system | 3.99e-17 | 98 |
blood island | 3.99e-17 | 98 |
immune system | 6.82e-17 | 93 |
hemolymphoid system | 4.42e-16 | 108 |
skeletal element | 1.87e-15 | 90 |
lateral plate mesoderm | 3.77e-14 | 203 |
skeletal system | 3.59e-12 | 100 |
musculoskeletal system | 5.04e-09 | 167 |
connective tissue | 6.98e-08 | 371 |
mesoderm | 3.19e-07 | 315 |
mesoderm-derived structure | 3.19e-07 | 315 |
presumptive mesoderm | 3.19e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.