FFCP PHASE1:Hg19::chr19:35530239..35530256,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3461|description=CAGE_peak_at_chr19:35530239..35530256,+|id=chr19:35530239..35530256,+|ontology_enrichment_celltype=CL:0002194!5.92e-12!63;CL:0000576!5.92e-12!63;CL:0000040!5.92e-12!63;CL:0000559!5.92e-12!63;CL:0000839!1.49e-11!70;CL:0000766!1.88e-11!76;CL:0002009!1.91e-11!65;CL:0000557!2.53e-11!71;CL:0002619!1.39e-10!3;CL:0000235!1.02e-07!10;CL:0000763!5.24e-07!112;CL:0000049!5.24e-07!112|ontology_enrichment_celltype_v019=CL:0002619;3.97e-30;3!CL:0000235;5.57e-26;6|ontology_enrichment_celltype_v019_2=CL:0002619,3.78e-30,3;CL:0000235,6.34e-26,6;CL:0002194,2.62e-09,59;CL:0000576,2.62e-09,59;CL:0000040,2.62e-09,59;CL:0000559,2.62e-09,59;CL:0002009,5.63e-09,61;CL:0000839,3.13e-08,66;CL:0000557,4.28e-08,67;CL:0000766,1.80e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.88e-21!102;UBERON:0003061!1.88e-21!102;UBERON:0000178!6.43e-19!15;UBERON:0000179!6.43e-19!15;UBERON:0000463!6.43e-19!15;UBERON:0002193!8.83e-19!112;UBERON:0007023!1.17e-16!115;UBERON:0002371!1.64e-09!80;UBERON:0001474!1.60e-08!86;UBERON:0003081!1.74e-08!216;UBERON:0002405!1.26e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;8.77e-50;15!UBERON:0000179;8.77e-50;15!UBERON:0000463;8.77e-50;15!UBERON:0002390;1.67e-25;32!UBERON:0002193;8.39e-15;42!UBERON:0001301;1.21e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.71e-50,15;UBERON:0000179,5.71e-50,15;UBERON:0000463,5.71e-50,15;UBERON:0002390,1.64e-28,98;UBERON:0003061,1.64e-28,98;UBERON:0002193,1.19e-25,108;UBERON:0003081,4.56e-14,203;UBERON:0001301,1.46e-10,1;UBERON:0007023,2.40e-08,114;UBERON:0000926,4.98e-08,315;UBERON:0004120,4.98e-08,315;UBERON:0006603,4.98e-08,315;UBERON:0002371,4.96e-07,76;UBERON:0002405,5.02e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,10.7479427635164,6.80176698639857,3.8636335145128,0,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,1.0246428261164,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,2.29391162142713,1.70894156152249,1.42939065274673,1.23408681925858,1.29694662238543,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,1.03382309777839,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0|short_description=p@chr19:35530239..35530256,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3461 | |||
|description=CAGE_peak_at_chr19:35530239..35530256,+ | |||
|id=chr19:35530239..35530256,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.92e-12!63;CL:0000576!5.92e-12!63;CL:0000040!5.92e-12!63;CL:0000559!5.92e-12!63;CL:0000839!1.49e-11!70;CL:0000766!1.88e-11!76;CL:0002009!1.91e-11!65;CL:0000557!2.53e-11!71;CL:0002619!1.39e-10!3;CL:0000235!1.02e-07!10;CL:0000763!5.24e-07!112;CL:0000049!5.24e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.97e-30;3!CL:0000235;5.57e-26;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.78e-30,3;CL:0000235,6.34e-26,6;CL:0002194,2.62e-09,59;CL:0000576,2.62e-09,59;CL:0000040,2.62e-09,59;CL:0000559,2.62e-09,59;CL:0002009,5.63e-09,61;CL:0000839,3.13e-08,66;CL:0000557,4.28e-08,67;CL:0000766,1.80e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-21!102;UBERON:0003061!1.88e-21!102;UBERON:0000178!6.43e-19!15;UBERON:0000179!6.43e-19!15;UBERON:0000463!6.43e-19!15;UBERON:0002193!8.83e-19!112;UBERON:0007023!1.17e-16!115;UBERON:0002371!1.64e-09!80;UBERON:0001474!1.60e-08!86;UBERON:0003081!1.74e-08!216;UBERON:0002405!1.26e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.77e-50;15!UBERON:0000179;8.77e-50;15!UBERON:0000463;8.77e-50;15!UBERON:0002390;1.67e-25;32!UBERON:0002193;8.39e-15;42!UBERON:0001301;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.71e-50,15;UBERON:0000179,5.71e-50,15;UBERON:0000463,5.71e-50,15;UBERON:0002390,1.64e-28,98;UBERON:0003061,1.64e-28,98;UBERON:0002193,1.19e-25,108;UBERON:0003081,4.56e-14,203;UBERON:0001301,1.46e-10,1;UBERON:0007023,2.40e-08,114;UBERON:0000926,4.98e-08,315;UBERON:0004120,4.98e-08,315;UBERON:0006603,4.98e-08,315;UBERON:0002371,4.96e-07,76;UBERON:0002405,5.02e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,10.7479427635164,6.80176698639857,3.8636335145128,0,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,1.0246428261164,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,2.29391162142713,1.70894156152249,1.42939065274673,1.23408681925858,1.29694662238543,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,1.03382309777839,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p@chr19:35530239..35530256,+ | |||
}} |
Revision as of 20:04, 11 September 2013
Short description: | p@chr19:35530239..35530256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:35530239..35530256, + |
Coexpression cluster: | C3461_CD14_Monocytederived_Whole_blood_Macrophage_spleen_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.78e-30 | 3 |
macrophage | 6.34e-26 | 6 |
monopoietic cell | 2.62e-09 | 59 |
monocyte | 2.62e-09 | 59 |
monoblast | 2.62e-09 | 59 |
promonocyte | 2.62e-09 | 59 |
macrophage dendritic cell progenitor | 5.63e-09 | 61 |
myeloid lineage restricted progenitor cell | 3.13e-08 | 66 |
granulocyte monocyte progenitor cell | 4.28e-08 | 67 |
myeloid leukocyte | 1.80e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 5.71e-50 | 15 |
haemolymphatic fluid | 5.71e-50 | 15 |
organism substance | 5.71e-50 | 15 |
hematopoietic system | 1.64e-28 | 98 |
blood island | 1.64e-28 | 98 |
hemolymphoid system | 1.19e-25 | 108 |
lateral plate mesoderm | 4.56e-14 | 203 |
epididymis | 1.46e-10 | 1 |
adult organism | 2.40e-08 | 114 |
mesoderm | 4.98e-08 | 315 |
mesoderm-derived structure | 4.98e-08 | 315 |
presumptive mesoderm | 4.98e-08 | 315 |
bone marrow | 4.96e-07 | 76 |
immune system | 5.02e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.