FFCP PHASE1:Hg19::chr19:3366570..3366619,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7786 | |||
|TSSclassifier=S | |||
|UniProt=F8W9H9 | |||
|association_with_transcript=0bp_to_ENST00000341919,ENST00000343825,uc002lxp.2,uc010xhi.1,uc010xhj.1_5end | |||
|description=CAGE_peak_1_at_NFIC_5end | |||
|id=chr19:3366570..3366619,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.43e-26!180;CL:0000057!1.03e-17!75;CL:0000222!2.88e-17!119;CL:0000183!1.13e-12!59;CL:0000680!3.52e-12!57;CL:0000056!3.52e-12!57;CL:0000355!3.52e-12!57;CL:0000187!4.90e-12!54;CL:0000192!6.38e-10!42;CL:0000514!6.38e-10!42;CL:0000220!2.53e-09!246;CL:0002321!1.04e-08!248;CL:0000393!1.40e-08!60;CL:0000211!1.40e-08!60;CL:0000359!3.00e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.67e-08;43!CL:0000057;5.26e-08;73!CL:0000187;3.89e-07;55!CL:0000359;5.14e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-17,76;CL:0000222,1.82e-17,121;CL:0000680,1.35e-12,58;CL:0000056,1.35e-12,58;CL:0000355,1.35e-12,58;CL:0000187,1.87e-12,55;CL:0000192,2.46e-10,43;CL:0000514,2.46e-10,43;CL:0000393,5.45e-09,61;CL:0000211,5.45e-09,61;CL:0002321,7.06e-09,250;CL:0000359,2.97e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.67e-08;43!CL:0000355;2.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@NFIC | |||
}} |
Revision as of 19:57, 11 September 2013
Short description: | p1@NFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341919, ENST00000343825, uc002lxp.2, uc010xhi.1, uc010xhj.1_5end |
EntrezGene: | NFIC |
HGNC: | 7786 |
UniProt: | F8W9H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-17 | 76 |
mesodermal cell | 1.82e-17 | 121 |
muscle precursor cell | 1.35e-12 | 58 |
myoblast | 1.35e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-12 | 58 |
muscle cell | 1.87e-12 | 55 |
smooth muscle cell | 2.46e-10 | 43 |
smooth muscle myoblast | 2.46e-10 | 43 |
electrically responsive cell | 5.45e-09 | 61 |
electrically active cell | 5.45e-09 | 61 |
embryonic cell | 7.06e-09 | 250 |
vascular associated smooth muscle cell | 2.97e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.