FFCP PHASE1:Hg19::chr19:3061274..3061306,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=166|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=307|TSSclassifier=S|UniProt=Q08117|association_with_transcript=-28bp_to_X73358_5end|coexpression_cluster_id=C18|description=CAGE_peak_8_at_AES_5end|id=chr19:3061274..3061306,-|ontology_enrichment_celltype=CL:0000542!1.60e-11!53;CL:0000051!1.60e-11!53;CL:0000791!1.79e-11!18;CL:0000789!1.79e-11!18;CL:0002420!1.79e-11!18;CL:0002419!1.79e-11!18;CL:0000790!1.79e-11!18;CL:0000838!2.21e-11!52;CL:0000625!2.27e-08!11;CL:0000084!3.51e-08!25;CL:0000827!3.51e-08!25;CL:0000236!9.19e-08!14|ontology_enrichment_celltype_v019=CL:0000791;2.60e-15;18!CL:0000789;2.60e-15;18!CL:0002419;2.60e-15;18!CL:0000084;5.69e-12;25!CL:0000236;7.77e-12;13!CL:0000542;2.92e-11;53!CL:0000625;2.96e-11;11!CL:0000624;5.03e-07;6|ontology_enrichment_celltype_v019_2=CL:0000542,6.17e-17,53;CL:0000051,6.17e-17,53;CL:0000838,9.68e-17,52;CL:0000791,3.01e-15,18;CL:0000789,3.01e-15,18;CL:0002420,3.01e-15,18;CL:0002419,3.01e-15,18;CL:0000790,3.01e-15,18;CL:0000084,7.17e-12,25;CL:0000827,7.17e-12,25;CL:0000625,3.27e-11,11;CL:0000236,1.97e-10,14;CL:0000624,5.36e-07,6|ontology_enrichment_development_v019=CL:0000790;2.60e-15;18!CL:0000051;2.92e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.93e-12!115|ontology_enrichment_uberon_v019=UBERON:0000178;5.82e-08;15!UBERON:0000179;5.82e-08;15!UBERON:0000463;5.82e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.17e-10,114;UBERON:0000178,6.34e-08,15;UBERON:0000179,6.34e-08,15;UBERON:0000463,6.34e-08,15|phase1_expression=1.2717486548939,0.642301571672949,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0.737201809504527,2.09340350391728,0,0.263766978228454,1.8564952944007,1.32558950291166,4.70627602516243,1.20538905604795,2.92124036154949,2.92759679274304,0.369363174230364,2.44800829493104,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0.382067028739756,0.164201178899891,0.314843125254717,3.54027849164014,9.21190555433311,3.09632246632152,0,2.10844143144775,2.21852406100073,0,0,0,2.76997704265939,3.20871115952227,3.25516306073778,0,0,0.257575567634187,0.290796477559129,1.13362783106643,0.242584061187816,0,0.411167888021826,0,0,0,0,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0,0,0.997318288108159,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,15.839662001519,19.6609900054367,15.1216573156804,16.2157484575273,24.8245511962328,22.4153451582248,26.4417949113945,14.3108063180305,17.6456020423929,10.5702694086769,7.26319133437935,0,3.92355994087075,0.526768169550154,16.523620689562,14.5413982217191,16.0369169219617,64.5339872208017,40.4143610625652,34.0882420129008,23.3792074089494,29.8580024452265,40.6556152315275,44.9713806004751,38.1833447908672,35.3532042442863,38.497566877724,7.89301942097645,16.3046510493651,18.5473974870434,24.3189963585779,22.4734295595359,30.3153019034433,19.0359695731911,15.3288197440768,21.6485290654057,10.6268270648191,19.1139248594458,14.9749194386976,14.2567806667256,19.1230401228771,19.7099381177804,24.9861453104692,15.6272986349051,18.8859439291841,14.314078768956,18.1859333132785,13.7583183688659,2.43806866313962,0.670700859703636,0.767175371061182,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,3.73290365168481,0.728590576585084,0.370784442784429,0,0.174129737299267,0.26591592103773,1.43094374583205,0,1.48583000531826,0.79504962946682,1.72046919021225,0.694281003215189,1.69592382577203,1.67799774483962,2.47606237746061,1.04497483268405,0,0,0,0.805658634218294,0,0.24406205754817,0,4.86085168729056,0.357198913136319,0.22452937262617,0,0,0.949265659568129,1.09921046358244,0,3.87780264148325,2.18047026071267,0,0.886413581652058,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,2.1349799145941,0.74000264525148,0.622422070799533,1.21239604862719,0.653847612453835,0,0,1.17160715916898,0.936480230490962,2.2818872861778,0.896692083310806,0.23486899728753,0.485618833104395,0.421352420106746,0.61246251376468,1.59684612505298,1.44656093646072,0,0.741800787835671,1.82032272387605,2.15585442544872,0.841680569770331,1.25118519871964,0.554128230968366,1.75591048352335,0.612975591598039,0.901428353439581,0.453728732640084,0.538168907066586,0.640672166455702,1.05965950579781,0.300091096084402,0.92747276314595,0.257640540045629,0,0.337552664482532,0.487185025805993,0,0.184099797284599,4.20279747728911,0.710019185033229,0.302256294682921,0.847802961552438,1.35282597214308,0.272746120590835,0.860413786167011,0.365921118388786,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |||
|TSSclassifier=S | |||
|UniProt=Q08117 | |||
|association_with_transcript=-28bp_to_X73358_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_AES_5end | |||
|id=chr19:3061274..3061306,- | |||
|ontology_enrichment_celltype=CL:0000542!1.60e-11!53;CL:0000051!1.60e-11!53;CL:0000791!1.79e-11!18;CL:0000789!1.79e-11!18;CL:0002420!1.79e-11!18;CL:0002419!1.79e-11!18;CL:0000790!1.79e-11!18;CL:0000838!2.21e-11!52;CL:0000625!2.27e-08!11;CL:0000084!3.51e-08!25;CL:0000827!3.51e-08!25;CL:0000236!9.19e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.60e-15;18!CL:0000789;2.60e-15;18!CL:0002419;2.60e-15;18!CL:0000084;5.69e-12;25!CL:0000236;7.77e-12;13!CL:0000542;2.92e-11;53!CL:0000625;2.96e-11;11!CL:0000624;5.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.17e-17,53;CL:0000051,6.17e-17,53;CL:0000838,9.68e-17,52;CL:0000791,3.01e-15,18;CL:0000789,3.01e-15,18;CL:0002420,3.01e-15,18;CL:0002419,3.01e-15,18;CL:0000790,3.01e-15,18;CL:0000084,7.17e-12,25;CL:0000827,7.17e-12,25;CL:0000625,3.27e-11,11;CL:0000236,1.97e-10,14;CL:0000624,5.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.60e-15;18!CL:0000051;2.92e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.93e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.82e-08;15!UBERON:0000179;5.82e-08;15!UBERON:0000463;5.82e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.17e-10,114;UBERON:0000178,6.34e-08,15;UBERON:0000179,6.34e-08,15;UBERON:0000463,6.34e-08,15 | |||
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| |||
|short_description=p8@AES | |||
}} |
Revision as of 19:53, 11 September 2013
Short description: | p8@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_AES_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -28bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.17e-17 | 53 |
common lymphoid progenitor | 6.17e-17 | 53 |
lymphoid lineage restricted progenitor cell | 9.68e-17 | 52 |
mature alpha-beta T cell | 3.01e-15 | 18 |
alpha-beta T cell | 3.01e-15 | 18 |
immature T cell | 3.01e-15 | 18 |
mature T cell | 3.01e-15 | 18 |
immature alpha-beta T cell | 3.01e-15 | 18 |
T cell | 7.17e-12 | 25 |
pro-T cell | 7.17e-12 | 25 |
CD8-positive, alpha-beta T cell | 3.27e-11 | 11 |
B cell | 1.97e-10 | 14 |
CD4-positive, alpha-beta T cell | 5.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.17e-10 | 114 |
blood | 6.34e-08 | 15 |
haemolymphatic fluid | 6.34e-08 | 15 |
organism substance | 6.34e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.