FFCP PHASE1:Hg19::chr19:3029163..3029174,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7089|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11838|TSSclassifier=S|UniProt=Q04725,E9PFU6|association_with_transcript=0bp_to_ENST00000262953,ENST00000439015,NM_003260,uc002lww.2,uc010dth.2,uc010xhd.1_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_TLE2_5end|id=chr19:3029163..3029174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002262;7.27e-08;2!CL:1000398;7.27e-08;2|ontology_enrichment_celltype_v019_2=CL:0002262,6.15e-08,2;CL:1000398,6.15e-08,2|ontology_enrichment_development_v019=UBERON:0006215;2.56e-41;3!UBERON:0005425;8.74e-15;1!UBERON:0008801;1.97e-14;1!UBERON:0010227;1.97e-14;1!UBERON:0006242;1.97e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.90e-41!115;UBERON:0001049!3.71e-18!57;UBERON:0005068!3.71e-18!57;UBERON:0006241!3.71e-18!57;UBERON:0007135!3.71e-18!57;UBERON:0002346!8.76e-14!90;UBERON:0002616!3.34e-13!59;UBERON:0000073!3.59e-13!94;UBERON:0001016!3.59e-13!94;UBERON:0003075!6.52e-13!86;UBERON:0007284!6.52e-13!86;UBERON:0001017!7.51e-13!82;UBERON:0005743!8.80e-13!86;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0003076!2.35e-10!15;UBERON:0003057!2.35e-10!15;UBERON:0003080!3.45e-10!42;UBERON:0002780!2.45e-09!41;UBERON:0001890!2.45e-09!41;UBERON:0006240!2.45e-09!41;UBERON:0002020!4.53e-09!34;UBERON:0003528!4.53e-09!34;UBERON:0000924!7.12e-09!173;UBERON:0006601!7.12e-09!173;UBERON:0001893!7.57e-09!34;UBERON:0002791!3.19e-08!33;UBERON:0004121!3.27e-08!169;UBERON:0004732!4.21e-08!13;UBERON:0002298!4.94e-08!8;UBERON:0004111!1.04e-07!241;UBERON:0005174!1.05e-07!5;UBERON:0001137!1.05e-07!5;UBERON:0000153!1.28e-07!129;UBERON:0007811!1.28e-07!129;UBERON:0001869!1.91e-07!32;UBERON:0000033!2.28e-07!123;UBERON:0000477!2.30e-07!286;UBERON:0001950!2.87e-07!20;UBERON:0004733!6.96e-07!12;UBERON:0002028!6.96e-07!12;UBERON:0007277!6.96e-07!12|ontology_enrichment_uberon_v019=UBERON:0002037;4.86e-21;6!UBERON:0004732;5.47e-17;13!UBERON:0000941;8.74e-15;1!UBERON:0001785;8.74e-15;1!UBERON:0002464;8.74e-15;1!UBERON:0004904;8.74e-15;1!UBERON:0001021;8.74e-15;1!UBERON:0002079;1.97e-14;1!UBERON:0001831;1.97e-14;1!UBERON:0002171;1.97e-14;1!UBERON:0006518;1.97e-14;1!UBERON:0008949;1.97e-14;1!UBERON:0000101;1.97e-14;1!UBERON:0001567;1.97e-14;1!UBERON:0002167;1.97e-14;1!UBERON:0002680;3.03e-14;9!UBERON:0001895;3.03e-14;9!UBERON:0004733;7.87e-11;12!UBERON:0002028;7.87e-11;12!UBERON:0001044;1.10e-09;6!UBERON:0003293;1.10e-09;6!UBERON:0003294;1.10e-09;6!UBERON:0010047;1.10e-09;6!UBERON:0003408;1.10e-09;6!UBERON:0000167;1.10e-09;6!UBERON:0003714;4.85e-08;2!UBERON:0005162;4.85e-08;2!UBERON:0000122;4.85e-08;2!UBERON:0001281;7.27e-08;2!UBERON:0003497;7.27e-08;2!UBERON:0003909;7.27e-08;2!UBERON:0001829;7.27e-08;2!UBERON:0002081;7.27e-08;2!UBERON:0003835;7.27e-08;2!UBERON:0004089;7.27e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-21,6;UBERON:0006215,4.86e-21,6;UBERON:0004732,5.15e-17,13;UBERON:0000941,7.13e-15,1;UBERON:0001785,7.13e-15,1;UBERON:0002464,7.13e-15,1;UBERON:0004904,7.13e-15,1;UBERON:0001021,7.13e-15,1;UBERON:0003902,7.13e-15,1;UBERON:0005425,7.13e-15,1;UBERON:0003076,1.19e-14,15;UBERON:0003057,1.19e-14,15;UBERON:0001831,1.23e-14,1;UBERON:0001567,1.23e-14,1;UBERON:0008801,1.23e-14,1;UBERON:0002079,1.61e-14,1;UBERON:0002171,2.75e-14,1;UBERON:0006518,2.75e-14,1;UBERON:0008949,2.75e-14,1;UBERON:0000101,2.75e-14,1;UBERON:0002167,2.75e-14,1;UBERON:0002680,3.03e-14,9;UBERON:0001895,3.03e-14,9;UBERON:0010092,3.03e-14,9;UBERON:0004733,7.88e-11,12;UBERON:0002028,7.88e-11,12;UBERON:0007277,7.88e-11,12;UBERON:0007023,1.48e-10,114;UBERON:0001044,9.26e-10,6;UBERON:0003293,9.26e-10,6;UBERON:0003294,9.26e-10,6;UBERON:0010047,9.26e-10,6;UBERON:0000167,9.26e-10,6;UBERON:0001048,9.02e-09,160;UBERON:0003714,4.38e-08,2;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2;UBERON:0001829,5.74e-08,2;UBERON:0004089,5.74e-08,2;UBERON:0001281,6.15e-08,2;UBERON:0003497,6.15e-08,2;UBERON:0003909,6.15e-08,2;UBERON:0003835,6.15e-08,2;UBERON:0002081,6.58e-08,2;UBERON:0010227,6.58e-08,2;UBERON:0002294,9.10e-07,9;UBERON:0001173,9.10e-07,9;UBERON:0004912,9.10e-07,9|phase1_expression=0,0.214100523890983,0.422863212287913,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7089 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11838 | |||
|TSSclassifier=S | |||
|UniProt=Q04725,E9PFU6 | |||
|association_with_transcript=0bp_to_ENST00000262953,ENST00000439015,NM_003260,uc002lww.2,uc010dth.2,uc010xhd.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_TLE2_5end | |||
|id=chr19:3029163..3029174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;7.27e-08;2!CL:1000398;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,6.15e-08,2;CL:1000398,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.56e-41;3!UBERON:0005425;8.74e-15;1!UBERON:0008801;1.97e-14;1!UBERON:0010227;1.97e-14;1!UBERON:0006242;1.97e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-41!115;UBERON:0001049!3.71e-18!57;UBERON:0005068!3.71e-18!57;UBERON:0006241!3.71e-18!57;UBERON:0007135!3.71e-18!57;UBERON:0002346!8.76e-14!90;UBERON:0002616!3.34e-13!59;UBERON:0000073!3.59e-13!94;UBERON:0001016!3.59e-13!94;UBERON:0003075!6.52e-13!86;UBERON:0007284!6.52e-13!86;UBERON:0001017!7.51e-13!82;UBERON:0005743!8.80e-13!86;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0003076!2.35e-10!15;UBERON:0003057!2.35e-10!15;UBERON:0003080!3.45e-10!42;UBERON:0002780!2.45e-09!41;UBERON:0001890!2.45e-09!41;UBERON:0006240!2.45e-09!41;UBERON:0002020!4.53e-09!34;UBERON:0003528!4.53e-09!34;UBERON:0000924!7.12e-09!173;UBERON:0006601!7.12e-09!173;UBERON:0001893!7.57e-09!34;UBERON:0002791!3.19e-08!33;UBERON:0004121!3.27e-08!169;UBERON:0004732!4.21e-08!13;UBERON:0002298!4.94e-08!8;UBERON:0004111!1.04e-07!241;UBERON:0005174!1.05e-07!5;UBERON:0001137!1.05e-07!5;UBERON:0000153!1.28e-07!129;UBERON:0007811!1.28e-07!129;UBERON:0001869!1.91e-07!32;UBERON:0000033!2.28e-07!123;UBERON:0000477!2.30e-07!286;UBERON:0001950!2.87e-07!20;UBERON:0004733!6.96e-07!12;UBERON:0002028!6.96e-07!12;UBERON:0007277!6.96e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.86e-21;6!UBERON:0004732;5.47e-17;13!UBERON:0000941;8.74e-15;1!UBERON:0001785;8.74e-15;1!UBERON:0002464;8.74e-15;1!UBERON:0004904;8.74e-15;1!UBERON:0001021;8.74e-15;1!UBERON:0002079;1.97e-14;1!UBERON:0001831;1.97e-14;1!UBERON:0002171;1.97e-14;1!UBERON:0006518;1.97e-14;1!UBERON:0008949;1.97e-14;1!UBERON:0000101;1.97e-14;1!UBERON:0001567;1.97e-14;1!UBERON:0002167;1.97e-14;1!UBERON:0002680;3.03e-14;9!UBERON:0001895;3.03e-14;9!UBERON:0004733;7.87e-11;12!UBERON:0002028;7.87e-11;12!UBERON:0001044;1.10e-09;6!UBERON:0003293;1.10e-09;6!UBERON:0003294;1.10e-09;6!UBERON:0010047;1.10e-09;6!UBERON:0003408;1.10e-09;6!UBERON:0000167;1.10e-09;6!UBERON:0003714;4.85e-08;2!UBERON:0005162;4.85e-08;2!UBERON:0000122;4.85e-08;2!UBERON:0001281;7.27e-08;2!UBERON:0003497;7.27e-08;2!UBERON:0003909;7.27e-08;2!UBERON:0001829;7.27e-08;2!UBERON:0002081;7.27e-08;2!UBERON:0003835;7.27e-08;2!UBERON:0004089;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-21,6;UBERON:0006215,4.86e-21,6;UBERON:0004732,5.15e-17,13;UBERON:0000941,7.13e-15,1;UBERON:0001785,7.13e-15,1;UBERON:0002464,7.13e-15,1;UBERON:0004904,7.13e-15,1;UBERON:0001021,7.13e-15,1;UBERON:0003902,7.13e-15,1;UBERON:0005425,7.13e-15,1;UBERON:0003076,1.19e-14,15;UBERON:0003057,1.19e-14,15;UBERON:0001831,1.23e-14,1;UBERON:0001567,1.23e-14,1;UBERON:0008801,1.23e-14,1;UBERON:0002079,1.61e-14,1;UBERON:0002171,2.75e-14,1;UBERON:0006518,2.75e-14,1;UBERON:0008949,2.75e-14,1;UBERON:0000101,2.75e-14,1;UBERON:0002167,2.75e-14,1;UBERON:0002680,3.03e-14,9;UBERON:0001895,3.03e-14,9;UBERON:0010092,3.03e-14,9;UBERON:0004733,7.88e-11,12;UBERON:0002028,7.88e-11,12;UBERON:0007277,7.88e-11,12;UBERON:0007023,1.48e-10,114;UBERON:0001044,9.26e-10,6;UBERON:0003293,9.26e-10,6;UBERON:0003294,9.26e-10,6;UBERON:0010047,9.26e-10,6;UBERON:0000167,9.26e-10,6;UBERON:0001048,9.02e-09,160;UBERON:0003714,4.38e-08,2;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2;UBERON:0001829,5.74e-08,2;UBERON:0004089,5.74e-08,2;UBERON:0001281,6.15e-08,2;UBERON:0003497,6.15e-08,2;UBERON:0003909,6.15e-08,2;UBERON:0003835,6.15e-08,2;UBERON:0002081,6.58e-08,2;UBERON:0010227,6.58e-08,2;UBERON:0002294,9.10e-07,9;UBERON:0001173,9.10e-07,9;UBERON:0004912,9.10e-07,9 | |||
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|short_description=p3@TLE2 | |||
}} |
Revision as of 19:52, 11 September 2013
Short description: | p3@TLE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TLE2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000262953, ENST00000439015, NM_003260, uc002lww.2, uc010dth.2, uc010xhd.1_5end |
EntrezGene: | TLE2 |
HGNC: | 11838 |
UniProt: | Q04725E9PFU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 6.15e-08 | 2 |
endothelial cell of hepatic sinusoid | 6.15e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.