FFCP PHASE1:Hg19::chr19:1941117..1941200,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1455|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2455|TSSclassifier=S|UniProt=P78368|association_with_transcript=0bp_to_ENST00000255641,NM_001319,uc002lul.3_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_CSNK1G2_5end|id=chr19:1941117..1941200,+|ontology_enrichment_celltype=CL:0000738!1.95e-21!140;CL:0000988!4.28e-20!182;CL:0000037!2.46e-19!172;CL:0000566!2.46e-19!172;CL:0002057!2.21e-18!42;CL:0002032!1.11e-17!165;CL:0000837!1.11e-17!165;CL:0002371!1.51e-17!591;CL:0002087!4.41e-17!119;CL:0000144!1.38e-16!625;CL:0002031!5.93e-16!124;CL:0000860!2.96e-15!45;CL:0000766!1.01e-14!76;CL:0000557!2.61e-12!71;CL:0000763!1.26e-11!112;CL:0000049!1.26e-11!112;CL:0000219!1.33e-11!390;CL:0002009!3.24e-11!65;CL:0002194!2.18e-10!63;CL:0000576!2.18e-10!63;CL:0000040!2.18e-10!63;CL:0000559!2.18e-10!63;CL:0000003!2.54e-10!722;CL:0002320!8.92e-10!365;CL:0000839!1.33e-09!70;CL:0000134!1.75e-09!358;CL:0000034!4.58e-08!444;CL:0000723!2.79e-07!436;CL:0000048!4.35e-07!430|ontology_enrichment_celltype_v019=CL:0000860;2.00e-13;33!CL:0002057;2.00e-13;33!CL:0000473;2.52e-10;39!CL:0000234;2.52e-10;39!CL:0000576;1.58e-08;48!CL:0000766;9.63e-08;69|ontology_enrichment_celltype_v019_2=CL:0000738,2.43e-23,136;CL:0000988,2.45e-21,177;CL:0000037,6.71e-21,168;CL:0002032,3.40e-19,161;CL:0000837,3.40e-19,161;CL:0002087,6.71e-19,115;CL:0000860,2.21e-18,42;CL:0002057,2.21e-18,42;CL:0002031,1.21e-17,120;CL:0000766,6.09e-17,72;CL:0000473,1.20e-16,48;CL:0000234,1.20e-16,48;CL:0000557,2.33e-14,67;CL:0002009,2.96e-13,61;CL:0000763,4.40e-13,108;CL:0000049,4.40e-13,108;CL:0002194,2.32e-12,59;CL:0000576,2.32e-12,59;CL:0000040,2.32e-12,59;CL:0000559,2.32e-12,59;CL:0000219,3.62e-12,386;CL:0000839,2.46e-11,66;CL:0002320,2.65e-10,361;CL:0000134,5.28e-10,354;CL:0000034,2.14e-08,441;CL:0000723,1.36e-07,433;CL:0000048,2.14e-07,427;CL:1000449,9.50e-07,15|ontology_enrichment_development_v019=CL:0002057;1.81e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.55e-17!102;UBERON:0003061!1.55e-17!102;UBERON:0002193!4.80e-17!112;UBERON:0003081!8.75e-15!216;UBERON:0001474!4.18e-12!86;UBERON:0002371!4.63e-12!80;UBERON:0002405!4.37e-10!115;UBERON:0004765!9.18e-10!101;UBERON:0001434!9.18e-10!101;UBERON:0002384!6.57e-09!375;UBERON:0000178!8.54e-07!15;UBERON:0000179!8.54e-07!15;UBERON:0000463!8.54e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;8.28e-07;15!UBERON:0000179;8.28e-07;15!UBERON:0000463;8.28e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.38e-19,98;UBERON:0003061,1.38e-19,98;UBERON:0002193,6.20e-19,108;UBERON:0003081,3.44e-14,203;UBERON:0002371,6.37e-14,76;UBERON:0001474,6.97e-14,82;UBERON:0002405,7.14e-14,93;UBERON:0004765,8.24e-12,90;UBERON:0001434,9.60e-11,100;UBERON:0002384,2.11e-09,371;UBERON:0000178,8.54e-07,15;UBERON:0000179,8.54e-07,15;UBERON:0000463,8.54e-07,15;UBERON:0004211,9.50e-07,15;UBERON:0009773,9.50e-07,15;UBERON:0001231,9.50e-07,15;UBERON:0001285,9.50e-07,15;UBERON:0007684,9.50e-07,15;UBERON:0004208,9.50e-07,15|phase1_expression=28.7051839247479,32.3291791075385,24.8079751208909,29.0212565224078,40.2264984984559,34.0212024399144,32.9289841618804,36.6397526587562,36.0436166915777,49.8839891098063,128.395414906927,49.8046328456793,51.17079377632,32.7980835344124,37.1165060815266,28.2376561509746,25.915864705031,31.403333886657,35.619094311707,70.794608394153,83.2322820276552,79.9309539769124,34.0620824685957,48.0429232005824,50.7192263963003,42.7915072188527,39.2440817570741,36.1282486229788,72.3790269401983,54.5037745298042,84.6844194538936,62.520643264567,75.3014796945625,44.3704812200145,30.5995442292191,45.0676466985126,37.5808562348604,109.13709548078,126.74409080113,106.335326650767,23.735040269432,26.5592806135563,26.7878590339554,73.8623053000189,71.0406774134962,75.6862270905986,70.4259981824224,69.0762051876667,63.4898060334962,66.7446350187389,60.4539267408678,49.1883038168257,73.7755756776364,65.1939530419664,106.98692440953,73.4145124216158,64.9516637137673,49.4391665779186,108.047614006929,73.4927472004254,85.0318377312725,65.9702600373432,59.8390972864896,72.8844323410907,85.0313069181751,63.5471451654077,69.1332696385088,57.5359443437942,64.663881884105,52.5597004186382,75.0695383265377,63.7120310258487,53.7986058649504,47.5324394201869,68.6711888887091,55.3498824142112,49.8739122290438,54.6643889943083,45.8067922086678,52.1573321046485,70.8143370828761,57.1738801283304,33.4392864476513,50.2447522361161,46.2544812009048,41.3928315889512,54.0534582498617,42.5316805566318,61.4771731689922,49.6107952358389,70.0131952004621,78.1025461863349,81.0419243625485,42.2948251452883,84.0762844472304,40.0343808858117,71.4056465513214,80.9602171263279,71.5493216518292,30.0935691703221,37.8069829294965,29.3537639555535,48.7066821019778,36.6540403152221,32.7012557297069,30.7932113471233,37.3709331995721,39.452126475508,35.3761425362869,56.4022012790609,49.743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9,52.289647931032,35.0340795195292,22.7847610594611,34.7330939076889,54.3497418634992,37.586734550158,36.6248217602727,20.801443762484,27.8150521198062,31.6544519439964,27.7606776103032,35.8272884557584,44.6038510059845,26.3604234884864,43.5275376983563,27.5511744445362,38.1789259030089,51.0403197082239,41.0705924724093,35.0854479325931,30.7439113945833,28.5512776640954,35.9847398591045,32.5426728606692,40.7607803242814,28.8666958368513,45.6252839300711,25.5267004579599,34.1462639605343,20.1185434934688,20.9670303261704,18.432968156529,23.8782699395249,40.7974287544057,27.5264662610883,59.0697380236598,23.8356700498071,38.4781436026347,30.2139736674,71.5388849037919,38.1125226484882,31.161370493641,51.8977608124458,41.4996625129653,49.0527011567133,22.7455164508801,47.3434619469388,58.6577163871906,35.9344916238363,38.7999785406166,16.8119857139949,36.6782981438311,20.8246924600176,36.9318044304642,21.2544864488377,44.8571143950595,29.9469891791502,32.0131054201582,49.5857500168442,38.4312036603806,24.2708014440562,26.0091454027718,28.4307033268054,13.7571448891259,36.1595335050559,27.0781287781689,53.1577143066278,43.5626526434642,35.3488543241509,30.255760305528,27.3529903931582,34.5716836715478,22.6005246163934,28.5362246398897,38.0236601401562,30.4620458459401,40.5106121142321,43.6934932236018,24.0668915968017,25.2198572754304,17.8636024220146,51.8820170860881,86.3674010843664,35.8920230038452,30.2655349996942,32.1691770245415,37.7919237643154,25.7236873471653,32.2655165156182,24.6942733589883,28.4113483843157,42.0945750802234,43.0225580817644,24.137214210579,31.3187440473551,27.9665750050483,35.3142925775374,33.7868726588513,27.4228040847649,26.2763428337878,39.8124351063976,52.1444918717998,40.9169817295801,54.4176392307074,30.4650318597496,41.4432328326074,42.6796192734875,54.6095132833133,36.5693254997236,30.766320189947,27.4387163324488,27.5201582624104,19.0158700891562,63.2821026755213,54.4657195217137,32.8854969485509,12.3669294355206,35.9657878697695,15.5382920925095,21.8671778603806,15.0775876073966,27.1998156113118,27.6048566885285,53.1198569680853,16.7677327996372,31.2860647247919,32.4324524399016,31.8531599925681,27.7055227607521,26.4457068209788,25.8674512998838,27.2114637146835,42.6574550253943,29.8388870014717,29.4075936323815,32.1218352963384,35.5147669697537,45.2062645483096,61.4928251267926,55.7671650061103,19.283825369411,29.6431692241181,42.2872002451917,37.2471558005724,34.8634255387451,30.3879916281077,47.9625549067281,50.5856687020405,25.7446907300823,36.5028519955626,37.5714968348419,43.4445090913533,35.0427515320269,38.9854252740394,28.9553765703793,38.5163443074768,28.3528946682709,24.0495664739004,29.8658423488246,36.101885658102,77.9762804665684,113.348827056063,24.0459137443046,34.3397546261492,29.6395234842363,25.9490230295477,31.1318545409549,48.2941277221774,30.4998666219269,26.9227479516638,36.1789768235213,32.8752289324412,29.7742971944195,56.3736683732098,39.8058239929354,30.6047528022332,41.0272473799312,36.1805702525455,48.268070571735,31.3489955351988,23.4640942403454,29.9491538248023,33.7723828002063,33.9535954834611,46.4942463195271,42.63560947633|short_description=p1@CSNK1G2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2455 | |||
|TSSclassifier=S | |||
|UniProt=P78368 | |||
|association_with_transcript=0bp_to_ENST00000255641,NM_001319,uc002lul.3_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CSNK1G2_5end | |||
|id=chr19:1941117..1941200,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.95e-21!140;CL:0000988!4.28e-20!182;CL:0000037!2.46e-19!172;CL:0000566!2.46e-19!172;CL:0002057!2.21e-18!42;CL:0002032!1.11e-17!165;CL:0000837!1.11e-17!165;CL:0002371!1.51e-17!591;CL:0002087!4.41e-17!119;CL:0000144!1.38e-16!625;CL:0002031!5.93e-16!124;CL:0000860!2.96e-15!45;CL:0000766!1.01e-14!76;CL:0000557!2.61e-12!71;CL:0000763!1.26e-11!112;CL:0000049!1.26e-11!112;CL:0000219!1.33e-11!390;CL:0002009!3.24e-11!65;CL:0002194!2.18e-10!63;CL:0000576!2.18e-10!63;CL:0000040!2.18e-10!63;CL:0000559!2.18e-10!63;CL:0000003!2.54e-10!722;CL:0002320!8.92e-10!365;CL:0000839!1.33e-09!70;CL:0000134!1.75e-09!358;CL:0000034!4.58e-08!444;CL:0000723!2.79e-07!436;CL:0000048!4.35e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-13;33!CL:0002057;2.00e-13;33!CL:0000473;2.52e-10;39!CL:0000234;2.52e-10;39!CL:0000576;1.58e-08;48!CL:0000766;9.63e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.43e-23,136;CL:0000988,2.45e-21,177;CL:0000037,6.71e-21,168;CL:0002032,3.40e-19,161;CL:0000837,3.40e-19,161;CL:0002087,6.71e-19,115;CL:0000860,2.21e-18,42;CL:0002057,2.21e-18,42;CL:0002031,1.21e-17,120;CL:0000766,6.09e-17,72;CL:0000473,1.20e-16,48;CL:0000234,1.20e-16,48;CL:0000557,2.33e-14,67;CL:0002009,2.96e-13,61;CL:0000763,4.40e-13,108;CL:0000049,4.40e-13,108;CL:0002194,2.32e-12,59;CL:0000576,2.32e-12,59;CL:0000040,2.32e-12,59;CL:0000559,2.32e-12,59;CL:0000219,3.62e-12,386;CL:0000839,2.46e-11,66;CL:0002320,2.65e-10,361;CL:0000134,5.28e-10,354;CL:0000034,2.14e-08,441;CL:0000723,1.36e-07,433;CL:0000048,2.14e-07,427;CL:1000449,9.50e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.55e-17!102;UBERON:0003061!1.55e-17!102;UBERON:0002193!4.80e-17!112;UBERON:0003081!8.75e-15!216;UBERON:0001474!4.18e-12!86;UBERON:0002371!4.63e-12!80;UBERON:0002405!4.37e-10!115;UBERON:0004765!9.18e-10!101;UBERON:0001434!9.18e-10!101;UBERON:0002384!6.57e-09!375;UBERON:0000178!8.54e-07!15;UBERON:0000179!8.54e-07!15;UBERON:0000463!8.54e-07!15 | |||
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| |||
|short_description=p1@CSNK1G2 | |||
}} |
Revision as of 19:35, 11 September 2013
Short description: | p1@CSNK1G2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CSNK1G2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000255641, NM_001319, uc002lul.3_5end |
EntrezGene: | CSNK1G2 |
HGNC: | 2455 |
UniProt: | P78368 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.43e-23 | 136 |
hematopoietic cell | 2.45e-21 | 177 |
hematopoietic stem cell | 6.71e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.40e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-19 | 161 |
nongranular leukocyte | 6.71e-19 | 115 |
classical monocyte | 2.21e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-18 | 42 |
hematopoietic lineage restricted progenitor cell | 1.21e-17 | 120 |
myeloid leukocyte | 6.09e-17 | 72 |
defensive cell | 1.20e-16 | 48 |
phagocyte | 1.20e-16 | 48 |
granulocyte monocyte progenitor cell | 2.33e-14 | 67 |
macrophage dendritic cell progenitor | 2.96e-13 | 61 |
myeloid cell | 4.40e-13 | 108 |
common myeloid progenitor | 4.40e-13 | 108 |
monopoietic cell | 2.32e-12 | 59 |
monocyte | 2.32e-12 | 59 |
monoblast | 2.32e-12 | 59 |
promonocyte | 2.32e-12 | 59 |
motile cell | 3.62e-12 | 386 |
myeloid lineage restricted progenitor cell | 2.46e-11 | 66 |
connective tissue cell | 2.65e-10 | 361 |
mesenchymal cell | 5.28e-10 | 354 |
stem cell | 2.14e-08 | 441 |
somatic stem cell | 1.36e-07 | 433 |
multi fate stem cell | 2.14e-07 | 427 |
epithelial cell of nephron | 9.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.38e-19 | 98 |
blood island | 1.38e-19 | 98 |
hemolymphoid system | 6.20e-19 | 108 |
lateral plate mesoderm | 3.44e-14 | 203 |
bone marrow | 6.37e-14 | 76 |
bone element | 6.97e-14 | 82 |
immune system | 7.14e-14 | 93 |
skeletal element | 8.24e-12 | 90 |
skeletal system | 9.60e-11 | 100 |
connective tissue | 2.11e-09 | 371 |
blood | 8.54e-07 | 15 |
haemolymphatic fluid | 8.54e-07 | 15 |
organism substance | 8.54e-07 | 15 |
nephron epithelium | 9.50e-07 | 15 |
renal tubule | 9.50e-07 | 15 |
nephron tubule | 9.50e-07 | 15 |
nephron | 9.50e-07 | 15 |
uriniferous tubule | 9.50e-07 | 15 |
nephrogenic mesenchyme | 9.50e-07 | 15 |
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