FFCP PHASE1:Hg19::chr19:18897380..18897392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C240|description=CAGE_peak_at_chr19:18897380..18897392,+|id=chr19:18897380..18897392,+|ontology_enrichment_celltype=CL:0000136!3.69e-23!15;CL:0002615!5.23e-23!3;CL:0002580!8.75e-23!3;CL:0000135!2.81e-22!3;CL:0000386!2.81e-22!3;CL:0000388!2.81e-22!3;CL:0002334!2.30e-21!12;CL:0000153!5.03e-20!9;CL:0000447!5.03e-20!9;CL:0000667!1.69e-19!6;CL:0000058!1.69e-19!6;CL:0000138!1.69e-19!6;CL:0000499!4.83e-16!27;CL:0002617!6.45e-16!2;CL:0000327!8.03e-13!14;CL:0002579!2.38e-10!3;CL:0000057!1.12e-09!75;CL:0002581!7.56e-09!1;CL:0002616!1.48e-08!1;CL:0000325!2.11e-08!39;CL:0000630!8.94e-08!9|ontology_enrichment_celltype_v019=CL:0002615;1.41e-46;3!CL:0002580;3.06e-46;3!CL:0002617;1.48e-31;2!CL:0000136;1.62e-29;13!CL:0002334;1.08e-20;12!CL:0002581;1.12e-16;1!CL:0000153;9.26e-16;9!CL:0000447;9.26e-16;9!CL:0000138;5.36e-11;6!CL:0000327;1.05e-09;15!CL:0000499;5.53e-09;28|ontology_enrichment_celltype_v019_2=CL:0002615,1.65e-46,3;CL:0002580,4.87e-46,3;CL:0002617,1.37e-31,2;CL:0000136,1.36e-25,15;CL:0002334,1.16e-20,12;CL:0002581,8.86e-17,1;CL:0000153,8.59e-16,9;CL:0000447,8.59e-16,9;CL:0000058,4.60e-11,6;CL:0000138,4.60e-11,6;CL:0000327,1.01e-09,15;CL:0000499,5.30e-09,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!3.31e-30!6;UBERON:0002358!3.31e-30!6;UBERON:0003684!3.31e-30!6;UBERON:0001178!3.31e-30!6;UBERON:0000043!2.81e-22!3;UBERON:0004457!1.99e-21!12;UBERON:0000042!1.99e-21!12;UBERON:0000310!2.12e-18!10;UBERON:0001443!1.03e-16!11;UBERON:0005406!1.08e-15!2;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1;UBERON:0009569!4.77e-07!113|ontology_enrichment_uberon_v019=UBERON:0000310;3.90e-38;10!UBERON:0001443;1.09e-34;11!UBERON:0004457;1.36e-27;9!UBERON:0000042;1.36e-27;9!UBERON:0003688;1.07e-23;6!UBERON:0002358;1.07e-23;6!UBERON:0003684;1.07e-23;6!UBERON:0001178;1.07e-23;6!UBERON:0005406;5.28e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.73e-38,10;UBERON:0001443,1.29e-34,11;UBERON:0003688,1.15e-23,6;UBERON:0002358,1.15e-23,6;UBERON:0003684,1.15e-23,6;UBERON:0001178,1.15e-23,6;UBERON:0004457,9.47e-21,12;UBERON:0000042,9.47e-21,12;UBERON:0005406,4.70e-09,2;UBERON:0009569,4.20e-08,112;UBERON:0000915,2.32e-07,52|phase1_expression=5.99538651592837,1.71280419112787,1.40954404095971,5.00366491765652,3.5756887554183,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.73815822752988,0.795285947051099,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,3.37616341233737,2.52594084989766,0,0.511707249066704,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,2.77305377178851,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:18897380..18897392,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr19:18897380..18897392,+ | |||
|id=chr19:18897380..18897392,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.69e-23!15;CL:0002615!5.23e-23!3;CL:0002580!8.75e-23!3;CL:0000135!2.81e-22!3;CL:0000386!2.81e-22!3;CL:0000388!2.81e-22!3;CL:0002334!2.30e-21!12;CL:0000153!5.03e-20!9;CL:0000447!5.03e-20!9;CL:0000667!1.69e-19!6;CL:0000058!1.69e-19!6;CL:0000138!1.69e-19!6;CL:0000499!4.83e-16!27;CL:0002617!6.45e-16!2;CL:0000327!8.03e-13!14;CL:0002579!2.38e-10!3;CL:0000057!1.12e-09!75;CL:0002581!7.56e-09!1;CL:0002616!1.48e-08!1;CL:0000325!2.11e-08!39;CL:0000630!8.94e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.41e-46;3!CL:0002580;3.06e-46;3!CL:0002617;1.48e-31;2!CL:0000136;1.62e-29;13!CL:0002334;1.08e-20;12!CL:0002581;1.12e-16;1!CL:0000153;9.26e-16;9!CL:0000447;9.26e-16;9!CL:0000138;5.36e-11;6!CL:0000327;1.05e-09;15!CL:0000499;5.53e-09;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.65e-46,3;CL:0002580,4.87e-46,3;CL:0002617,1.37e-31,2;CL:0000136,1.36e-25,15;CL:0002334,1.16e-20,12;CL:0002581,8.86e-17,1;CL:0000153,8.59e-16,9;CL:0000447,8.59e-16,9;CL:0000058,4.60e-11,6;CL:0000138,4.60e-11,6;CL:0000327,1.01e-09,15;CL:0000499,5.30e-09,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.31e-30!6;UBERON:0002358!3.31e-30!6;UBERON:0003684!3.31e-30!6;UBERON:0001178!3.31e-30!6;UBERON:0000043!2.81e-22!3;UBERON:0004457!1.99e-21!12;UBERON:0000042!1.99e-21!12;UBERON:0000310!2.12e-18!10;UBERON:0001443!1.03e-16!11;UBERON:0005406!1.08e-15!2;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1;UBERON:0009569!4.77e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.90e-38;10!UBERON:0001443;1.09e-34;11!UBERON:0004457;1.36e-27;9!UBERON:0000042;1.36e-27;9!UBERON:0003688;1.07e-23;6!UBERON:0002358;1.07e-23;6!UBERON:0003684;1.07e-23;6!UBERON:0001178;1.07e-23;6!UBERON:0005406;5.28e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.73e-38,10;UBERON:0001443,1.29e-34,11;UBERON:0003688,1.15e-23,6;UBERON:0002358,1.15e-23,6;UBERON:0003684,1.15e-23,6;UBERON:0001178,1.15e-23,6;UBERON:0004457,9.47e-21,12;UBERON:0000042,9.47e-21,12;UBERON:0005406,4.70e-09,2;UBERON:0009569,4.20e-08,112;UBERON:0000915,2.32e-07,52 | |||
|phase1_expression=5.99538651592837,1.71280419112787,1.40954404095971,5.00366491765652,3.5756887554183,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.73815822752988,0.795285947051099,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,3.37616341233737,2.52594084989766,0,0.511707249066704,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,2.77305377178851,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:18897380..18897392,+ | |||
}} |
Revision as of 19:31, 11 September 2013
Short description: | p@chr19:18897380..18897392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18897380..18897392, + |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.65e-46 | 3 |
preadipocyte of the breast | 4.87e-46 | 3 |
adipocyte of breast | 1.37e-31 | 2 |
fat cell | 1.36e-25 | 15 |
preadipocyte | 1.16e-20 | 12 |
perirenal preadipocyte | 8.86e-17 | 1 |
GAG secreting cell | 8.59e-16 | 9 |
carbohydrate secreting cell | 8.59e-16 | 9 |
chondroblast | 4.60e-11 | 6 |
chondrocyte | 4.60e-11 | 6 |
extracellular matrix secreting cell | 1.01e-09 | 15 |
stromal cell | 5.30e-09 | 28 |
Ontology term | p-value | n |
---|---|---|
breast | 4.73e-38 | 10 |
chest | 1.29e-34 | 11 |
omentum | 1.15e-23 | 6 |
peritoneum | 1.15e-23 | 6 |
abdominal cavity | 1.15e-23 | 6 |
visceral peritoneum | 1.15e-23 | 6 |
cavity lining | 9.47e-21 | 12 |
serous membrane | 9.47e-21 | 12 |
perirenal fat | 4.70e-09 | 2 |
subdivision of trunk | 4.20e-08 | 112 |
thoracic segment of trunk | 2.32e-07 | 52 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.