FFCP PHASE1:Hg19::chr19:18499210..18499232,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9518|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=30142|TSSclassifier=N|UniProt=Q99988|association_with_transcript=-375bp_to_AF173860_5end|coexpression_cluster_id=C1813|description=CAGE_peak_4_at_GDF15_5end|id=chr19:18499210..18499232,+|ontology_enrichment_celltype=CL:0000066!1.40e-10!254;CL:0002139!1.12e-07!24|ontology_enrichment_celltype_v019=CL:0002567;1.34e-10;3!CL:0000167;9.10e-09;1!CL:0000164;9.10e-09;1!CL:0000502;9.10e-09;1!CL:0000172;9.10e-09;1!CL:0002379;9.10e-09;1!CL:0000173;9.10e-09;1!CL:0000313;2.20e-08;1!CL:0002139;3.58e-07;24|ontology_enrichment_celltype_v019_2=CL:0002567,1.97e-10,3;CL:0000167,8.15e-09,1;CL:0000164,8.15e-09,1;CL:0000502,8.15e-09,1;CL:0000172,8.15e-09,1;CL:0000173,8.15e-09,1;CL:0002351,8.15e-09,1;CL:0002379,8.78e-09,1;CL:0000313,3.79e-08,1;CL:0002139,3.23e-07,24|ontology_enrichment_development_v019=CL:0002351;9.10e-09;1!UBERON:0000358;9.10e-09;1!UBERON:0003124;2.20e-08;1|ontology_enrichment_disease=DOID:193!9.67e-07!29|ontology_enrichment_disease_v019=DOID:1909;3.97e-16;2!DOID:3620;9.10e-09;1!DOID:3565;9.10e-09;1!DOID:4430;9.10e-09;1!DOID:2152;2.20e-08;1|ontology_enrichment_disease_v019_2=DOID:1909,4.13e-16,2;DOID:4430,8.15e-09,1;DOID:3620,8.78e-09,1;DOID:3565,8.78e-09,1;DOID:2152,3.79e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001282;2.20e-08;1!UBERON:0004911;2.20e-08;1!UBERON:0009842;2.20e-08;1!UBERON:0003704;2.20e-08;1!UBERON:0001171;2.20e-08;1!UBERON:0001172;2.20e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.64e-08,1;UBERON:0009842,2.64e-08,1;UBERON:0003704,2.64e-08,1;UBERON:0001171,2.64e-08,1;UBERON:0001172,2.64e-08,1;UBERON:0004911,3.79e-08,1|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.838998872419812,0.825354125820202,1.04497483268405,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0,0.367663080345869,0,0.0892997282840798,0,0,0,1.89853131913626,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62904152655162,0,0,0,0.117408694235822,1.44366447761074,1.85194205030644,0.380508304469197,1.58040879591855,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,1.14596527667483,2.34434894420094,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,9.09630016223939,2.0694614258501,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.896974044789907,0,0.482561763430822,0,0,0,0.0821271560138091,0.519254429183621,0,0.241718899183244,0,0.920809889358963,0.459257792658427,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0.650756789328606,0.824328093181778,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.330569830721956,0.384380134730212,0,1.31505115112215,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,0,0,0.848432591722276,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.192444225451024,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,1.36730467016401,0,0.628303510868405,0,0,0.641183153813036,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0.627865836814451,1.19472429772959,0,0.138674673013139,0.867798691675654,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0.288180834308212,0.114536596165916,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,5.15606999641603,3.14011866899464,2.35265819698172,0,0,0,0,0,0,0,0,1.83072054717539,0,0.15543720058278,0,0.318593534327405,3.14862178514523,0,0,0.53168342911599,1.5652351854352,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,1.43325506366115,0,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0,0,0,1.11855431797792,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,2.82190377816914,0,2.59244201811789,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0.735159196278759,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p4@GDF15}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30142 | |||
|TSSclassifier=N | |||
|UniProt=Q99988 | |||
|association_with_transcript=-375bp_to_AF173860_5end | |||
|coexpression_cluster_id=C1813 | |||
|description=CAGE_peak_4_at_GDF15_5end | |||
|id=chr19:18499210..18499232,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.40e-10!254;CL:0002139!1.12e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.34e-10;3!CL:0000167;9.10e-09;1!CL:0000164;9.10e-09;1!CL:0000502;9.10e-09;1!CL:0000172;9.10e-09;1!CL:0002379;9.10e-09;1!CL:0000173;9.10e-09;1!CL:0000313;2.20e-08;1!CL:0002139;3.58e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.97e-10,3;CL:0000167,8.15e-09,1;CL:0000164,8.15e-09,1;CL:0000502,8.15e-09,1;CL:0000172,8.15e-09,1;CL:0000173,8.15e-09,1;CL:0002351,8.15e-09,1;CL:0002379,8.78e-09,1;CL:0000313,3.79e-08,1;CL:0002139,3.23e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002351;9.10e-09;1!UBERON:0000358;9.10e-09;1!UBERON:0003124;2.20e-08;1 | |||
|ontology_enrichment_disease=DOID:193!9.67e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.97e-16;2!DOID:3620;9.10e-09;1!DOID:3565;9.10e-09;1!DOID:4430;9.10e-09;1!DOID:2152;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.13e-16,2;DOID:4430,8.15e-09,1;DOID:3620,8.78e-09,1;DOID:3565,8.78e-09,1;DOID:2152,3.79e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.20e-08;1!UBERON:0004911;2.20e-08;1!UBERON:0009842;2.20e-08;1!UBERON:0003704;2.20e-08;1!UBERON:0001171;2.20e-08;1!UBERON:0001172;2.20e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.64e-08,1;UBERON:0009842,2.64e-08,1;UBERON:0003704,2.64e-08,1;UBERON:0001171,2.64e-08,1;UBERON:0001172,2.64e-08,1;UBERON:0004911,3.79e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.838998872419812,0.825354125820202,1.04497483268405,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0,0.367663080345869,0,0.0892997282840798,0,0,0,1.89853131913626,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62904152655162,0,0,0,0.117408694235822,1.44366447761074,1.85194205030644,0.380508304469197,1.58040879591855,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,1.14596527667483,2.34434894420094,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,9.09630016223939,2.0694614258501,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.896974044789907,0,0.482561763430822,0,0,0,0.0821271560138091,0.519254429183621,0,0.241718899183244,0,0.920809889358963,0.459257792658427,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0.650756789328606,0.824328093181778,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.330569830721956,0.384380134730212,0,1.31505115112215,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,0,0,0.848432591722276,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.192444225451024,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,1.36730467016401,0,0.628303510868405,0,0,0.641183153813036,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0.627865836814451,1.19472429772959,0,0.138674673013139,0.867798691675654,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0.288180834308212,0.114536596165916,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,5.15606999641603,3.14011866899464,2.35265819698172,0,0,0,0,0,0,0,0,1.83072054717539,0,0.15543720058278,0,0.318593534327405,3.14862178514523,0,0,0.53168342911599,1.5652351854352,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,1.43325506366115,0,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0,0,0,1.11855431797792,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,2.82190377816914,0,2.59244201811789,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0.735159196278759,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p4@GDF15 | |||
}} |
Revision as of 19:27, 11 September 2013
Short description: | p4@GDF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GDF15_5end |
Coexpression cluster: | C1813_somatostatinoma_melanoma_mesenchymal_placenta_smallcell_Keratocytes_renal |
Association with transcript: | -375bp_to_AF173860_5end |
EntrezGene: | GDF15 |
HGNC: | 30142 |
UniProt: | Q99988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.97e-10 | 3 |
peptide hormone secreting cell | 8.15e-09 | 1 |
enteroendocrine cell | 8.15e-09 | 1 |
type D enteroendocrine cell | 8.15e-09 | 1 |
somatostatin secreting cell | 8.15e-09 | 1 |
pancreatic D cell | 8.15e-09 | 1 |
progenitor cell of endocrine pancreas | 8.15e-09 | 1 |
meningothelial cell | 8.78e-09 | 1 |
serous secreting cell | 3.79e-08 | 1 |
endothelial cell of vascular tree | 3.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.64e-08 | 1 |
acinus | 2.64e-08 | 1 |
intrahepatic bile duct | 2.64e-08 | 1 |
portal lobule | 2.64e-08 | 1 |
hepatic acinus | 2.64e-08 | 1 |
epithelium of female gonad | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.13e-16 | 2 |
somatostatinoma | 8.15e-09 | 1 |
central nervous system cancer | 8.78e-09 | 1 |
meningioma | 8.78e-09 | 1 |
ovary epithelial cancer | 3.79e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.