FFCP PHASE1:Hg19::chr19:17638041..17638055,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=199786|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24130|TSSclassifier=S|UniProt=|association_with_transcript=-9bp_to_uc010xps.1_5end|coexpression_cluster_id=C47|description=CAGE_peak_2_at_FAM129C_5end|id=chr19:17638041..17638055,+|ontology_enrichment_celltype=CL:0000945!7.07e-53!24;CL:0000826!7.07e-53!24;CL:0000236!7.33e-36!14;CL:0000542!7.03e-33!53;CL:0000051!7.03e-33!53;CL:0000838!3.91e-31!52;CL:0002087!2.95e-17!119;CL:0000738!2.10e-16!140;CL:0000037!3.68e-15!172;CL:0000566!3.68e-15!172;CL:0000988!1.03e-13!182;CL:0002031!6.38e-12!124;CL:0002032!1.10e-10!165;CL:0000837!1.10e-10!165;CL:0000784!1.18e-08!3;CL:0000817!1.76e-08!3;CL:0000842!9.88e-08!3|ontology_enrichment_celltype_v019=CL:0000945;3.31e-77;24!CL:0000236;1.68e-57;13!CL:0000542;1.15e-26;53!CL:0000784;6.25e-14;3|ontology_enrichment_celltype_v019_2=CL:0000945,2.73e-77,24;CL:0000826,2.73e-77,24;CL:0000236,3.46e-61,14;CL:0000542,1.01e-38,53;CL:0000051,1.01e-38,53;CL:0000838,4.41e-36,52;CL:0002087,8.62e-18,115;CL:0000738,4.78e-17,136;CL:0000037,4.11e-15,168;CL:0000988,5.23e-14,177;CL:0002031,6.95e-14,120;CL:0000784,7.62e-14,3;CL:0000817,1.52e-13,3;CL:0002032,2.87e-12,161;CL:0000837,2.87e-12,161;CL:0000785,1.42e-09,2;CL:0000955,1.42e-09,2;CL:0000818,1.42e-09,2;CL:0000954,1.42e-09,2;CL:0000816,1.42e-09,2|ontology_enrichment_development_v019=CL:0000051;1.15e-26;53!CL:0000954;1.59e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.64e-21!15;UBERON:0000179!4.64e-21!15;UBERON:0000463!4.64e-21!15;UBERON:0007023!1.89e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.00e-20;15!UBERON:0000179;1.00e-20;15!UBERON:0000463;1.00e-20;15!UBERON:0002390;1.90e-15;32!UBERON:0002193;6.61e-10;42!UBERON:0002106;9.69e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-20,15;UBERON:0000179,1.03e-20,15;UBERON:0000463,1.03e-20,15;UBERON:0002106,9.83e-07,3;UBERON:0004854,9.83e-07,3;UBERON:0009034,9.83e-07,3;UBERON:0002095,9.83e-07,3;UBERON:0004782,9.83e-07,3;UBERON:0003281,9.83e-07,3;UBERON:0009664,9.83e-07,3;UBERON:0002296,9.83e-07,3;UBERON:0005602,9.83e-07,3;UBERON:0001179,9.83e-07,3;UBERON:0006293,9.83e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,2.54511827294832,5.19491156670283,0,0,0.154816123316076,0,0,0,12.7820880957498,0.426507697462265,0.880801318004542,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,35.1992488922645,29.4914850081551,48.033499708632,30.297845802222,39.6392027165652,41.3821756767228,36.3574680031674,36.2540426723438,21.630092826159,22.3150131960957,22.5541204593885,0,1.68152568894461,1.58030450865046,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.10868122638163,6.29194401858141,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0.764637207142375,2.84823593587081,4.04994018278241,4.52498500394814,3.8908398671563,1.62009431171434,2.37937552888281,0,0,0,3.15865397713722,5.91503773203424,0,0,0,0,0,0,0,13.4658460629583,0,0,0,0.802940375518498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3545300572164,8.56571342704538,0,2.21552649829925,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,16.0560214509786,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0,5.72425212390211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70324832510653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,1.95897778844825,0,0,0,0,0,0.078493092850514,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=199786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24130 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_uc010xps.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_FAM129C_5end | |||
|id=chr19:17638041..17638055,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.07e-53!24;CL:0000826!7.07e-53!24;CL:0000236!7.33e-36!14;CL:0000542!7.03e-33!53;CL:0000051!7.03e-33!53;CL:0000838!3.91e-31!52;CL:0002087!2.95e-17!119;CL:0000738!2.10e-16!140;CL:0000037!3.68e-15!172;CL:0000566!3.68e-15!172;CL:0000988!1.03e-13!182;CL:0002031!6.38e-12!124;CL:0002032!1.10e-10!165;CL:0000837!1.10e-10!165;CL:0000784!1.18e-08!3;CL:0000817!1.76e-08!3;CL:0000842!9.88e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.31e-77;24!CL:0000236;1.68e-57;13!CL:0000542;1.15e-26;53!CL:0000784;6.25e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.73e-77,24;CL:0000826,2.73e-77,24;CL:0000236,3.46e-61,14;CL:0000542,1.01e-38,53;CL:0000051,1.01e-38,53;CL:0000838,4.41e-36,52;CL:0002087,8.62e-18,115;CL:0000738,4.78e-17,136;CL:0000037,4.11e-15,168;CL:0000988,5.23e-14,177;CL:0002031,6.95e-14,120;CL:0000784,7.62e-14,3;CL:0000817,1.52e-13,3;CL:0002032,2.87e-12,161;CL:0000837,2.87e-12,161;CL:0000785,1.42e-09,2;CL:0000955,1.42e-09,2;CL:0000818,1.42e-09,2;CL:0000954,1.42e-09,2;CL:0000816,1.42e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.15e-26;53!CL:0000954;1.59e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.64e-21!15;UBERON:0000179!4.64e-21!15;UBERON:0000463!4.64e-21!15;UBERON:0007023!1.89e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.00e-20;15!UBERON:0000179;1.00e-20;15!UBERON:0000463;1.00e-20;15!UBERON:0002390;1.90e-15;32!UBERON:0002193;6.61e-10;42!UBERON:0002106;9.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-20,15;UBERON:0000179,1.03e-20,15;UBERON:0000463,1.03e-20,15;UBERON:0002106,9.83e-07,3;UBERON:0004854,9.83e-07,3;UBERON:0009034,9.83e-07,3;UBERON:0002095,9.83e-07,3;UBERON:0004782,9.83e-07,3;UBERON:0003281,9.83e-07,3;UBERON:0009664,9.83e-07,3;UBERON:0002296,9.83e-07,3;UBERON:0005602,9.83e-07,3;UBERON:0001179,9.83e-07,3;UBERON:0006293,9.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,2.54511827294832,5.19491156670283,0,0,0.154816123316076,0,0,0,12.7820880957498,0.426507697462265,0.880801318004542,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,35.1992488922645,29.4914850081551,48.033499708632,30.297845802222,39.6392027165652,41.3821756767228,36.3574680031674,36.2540426723438,21.630092826159,22.3150131960957,22.5541204593885,0,1.68152568894461,1.58030450865046,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.10868122638163,6.29194401858141,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0.764637207142375,2.84823593587081,4.04994018278241,4.52498500394814,3.8908398671563,1.62009431171434,2.37937552888281,0,0,0,3.15865397713722,5.91503773203424,0,0,0,0,0,0,0,13.4658460629583,0,0,0,0.802940375518498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3545300572164,8.56571342704538,0,2.21552649829925,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,16.0560214509786,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0,5.72425212390211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70324832510653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,1.95897778844825,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,4.22927630909341,7.79940444480284,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0.258355639344024,0.744896571550295,0,0,0.202117188958219,0,0,6.39844503638581,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,7.84967795005002,6.73193833836789 | |||
|short_description=p2@FAM129C | |||
}} |
Revision as of 19:19, 11 September 2013
Short description: | p2@FAM129C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FAM129C_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -9bp_to_uc010xps.1_5end |
EntrezGene: | FAM129C |
HGNC: | 24130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.73e-77 | 24 |
pro-B cell | 2.73e-77 | 24 |
B cell | 3.46e-61 | 14 |
lymphocyte | 1.01e-38 | 53 |
common lymphoid progenitor | 1.01e-38 | 53 |
lymphoid lineage restricted progenitor cell | 4.41e-36 | 52 |
nongranular leukocyte | 8.62e-18 | 115 |
leukocyte | 4.78e-17 | 136 |
hematopoietic stem cell | 4.11e-15 | 168 |
hematopoietic cell | 5.23e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 6.95e-14 | 120 |
plasmacytoid dendritic cell | 7.62e-14 | 3 |
precursor B cell | 1.52e-13 | 3 |
hematopoietic oligopotent progenitor cell | 2.87e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-12 | 161 |
mature B cell | 1.42e-09 | 2 |
pre-B-II cell | 1.42e-09 | 2 |
transitional stage B cell | 1.42e-09 | 2 |
small pre-B-II cell | 1.42e-09 | 2 |
immature B cell | 1.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.03e-20 | 15 |
haemolymphatic fluid | 1.03e-20 | 15 |
organism substance | 1.03e-20 | 15 |
spleen | 9.83e-07 | 3 |
gastrointestinal system mesentery | 9.83e-07 | 3 |
stomach region | 9.83e-07 | 3 |
mesentery | 9.83e-07 | 3 |
gastrointestinal system serosa | 9.83e-07 | 3 |
mesentery of stomach | 9.83e-07 | 3 |
gut mesentery | 9.83e-07 | 3 |
dorsal mesentery | 9.83e-07 | 3 |
dorsal mesogastrium | 9.83e-07 | 3 |
peritoneal cavity | 9.83e-07 | 3 |
spleen primordium | 9.83e-07 | 3 |
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