FFCP PHASE1:Hg19::chr19:14887911..14887932,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30817|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3337|TSSclassifier=N|UniProt=|association_with_transcript=-172bp_to_uc010xnw.1,uc010xny.1_5end|coexpression_cluster_id=C92|description=CAGE_peak_3_at_EMR2_5end|id=chr19:14887911..14887932,-|ontology_enrichment_celltype=CL:0000766!7.57e-40!76;CL:0000860!5.90e-38!45;CL:0000763!1.77e-37!112;CL:0000049!1.77e-37!112;CL:0002057!3.55e-35!42;CL:0000557!8.04e-33!71;CL:0000839!5.80e-32!70;CL:0002009!1.93e-30!65;CL:0002194!2.36e-30!63;CL:0000576!2.36e-30!63;CL:0000040!2.36e-30!63;CL:0000559!2.36e-30!63;CL:0000988!2.46e-24!182;CL:0000037!3.28e-23!172;CL:0000566!3.28e-23!172;CL:0002032!2.78e-21!165;CL:0000837!2.78e-21!165;CL:0000738!9.39e-20!140;CL:0002031!1.03e-14!124;CL:0002087!7.55e-14!119;CL:0002393!1.28e-10!9;CL:0002397!1.28e-10!9;CL:0000094!1.12e-07!8|ontology_enrichment_celltype_v019=CL:0000860;6.98e-44;33!CL:0002057;6.98e-44;33!CL:0000576;4.24e-34;48!CL:0000473;1.90e-32;39!CL:0000234;1.90e-32;39!CL:0000766;5.40e-32;69!CL:0000094;7.85e-19;8!CL:0000763;1.80e-18;100!CL:0000875;3.31e-14;3!CL:0002396;3.31e-14;3!CL:0000081;1.64e-13;11!CL:0000097;2.20e-13;5!CL:0000771;7.75e-10;2!CL:0000738;1.48e-09;136!CL:0000163;1.85e-07;9!CL:0002087;3.67e-07;104!CL:0002393;8.88e-07;6!CL:0002397;8.88e-07;6!CL:0000775;9.34e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,2.79e-69,72;CL:0000860,6.37e-65,42;CL:0002057,6.37e-65,42;CL:0000473,5.75e-56,48;CL:0000234,5.75e-56,48;CL:0000839,1.33e-51,66;CL:0000557,9.84e-51,67;CL:0000763,4.45e-49,108;CL:0000049,4.45e-49,108;CL:0002194,1.98e-43,59;CL:0000576,1.98e-43,59;CL:0000040,1.98e-43,59;CL:0000559,1.98e-43,59;CL:0002009,8.20e-42,61;CL:0000738,6.06e-33,136;CL:0002032,3.78e-30,161;CL:0000837,3.78e-30,161;CL:0000037,1.55e-28,168;CL:0000988,1.20e-26,177;CL:0002031,3.13e-25,120;CL:0002087,2.93e-19,115;CL:0000094,1.18e-18,8;CL:0002393,6.20e-17,9;CL:0002397,6.20e-17,9;CL:0000875,3.34e-14,3;CL:0002396,3.34e-14,3;CL:0000081,2.20e-13,11;CL:0000097,2.69e-13,5;CL:0002028,2.69e-13,5;CL:0000771,7.15e-10,2;CL:0000134,5.26e-09,354;CL:0000219,7.30e-09,386;CL:0002320,1.15e-08,361;CL:0000163,2.06e-07,9|ontology_enrichment_development_v019=CL:0002057;1.15e-46;42!CL:0000049;6.92e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.49e-35!102;UBERON:0003061!2.49e-35!102;UBERON:0002193!4.67e-31!112;UBERON:0002371!4.30e-29!80;UBERON:0001474!1.28e-25!86;UBERON:0004765!1.27e-19!101;UBERON:0001434!1.27e-19!101;UBERON:0002405!3.65e-17!115;UBERON:0003081!1.88e-09!216;UBERON:0000178!3.27e-09!15;UBERON:0000179!3.27e-09!15;UBERON:0000463!3.27e-09!15;UBERON:0001737!2.76e-08!9;UBERON:0002204!2.47e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.33e-44,76;UBERON:0001474,3.31e-40,82;UBERON:0002390,2.09e-37,98;UBERON:0003061,2.09e-37,98;UBERON:0004765,5.17e-36,90;UBERON:0002405,1.27e-34,93;UBERON:0002193,2.97e-33,108;UBERON:0001434,1.05e-31,100;UBERON:0002204,4.14e-16,167;UBERON:0003081,2.47e-15,203;UBERON:0002384,3.35e-08,371;UBERON:0000926,3.46e-07,315;UBERON:0004120,3.46e-07,315;UBERON:0006603,3.46e-07,315|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,0.928896739896456,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,3.48955773070955,1.51150377475524,2.42584061187816,3.0215774797739,1.23350366406548,0.929119112685311,1.43846196161075,1.5369642391746,0.236482229888585,1.03423704220986,1.29096936716765,1.35426486594342,1.50593871634084,1.63743690034707,1.57306439111559,2.44867113896722,0.962787081228281,5.11469700639233,1.64925650093358,1.39624560335142,1.27867425159808,0.580418477257168,0,1.24564449799115,1.25624332628372,1.0429658368404,0.868755378820466,0,0,0.949387162322653,2.11255286311942,2.97646019951061,1.46761051855863,0.673971786878971,0.150176892841506,0.16072558669708,7.41033133727246,7.75775041076451,6.02791707423292,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.828147600278907,1.01150814046861,0.964044119533928,0.55146986366197,0.217879444092406,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0.268675568108545,0,0,0,1.05658120815871,2.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3337 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-172bp_to_uc010xnw.1,uc010xny.1_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_3_at_EMR2_5end | |||
|id=chr19:14887911..14887932,- | |||
|ontology_enrichment_celltype=CL:0000766!7.57e-40!76;CL:0000860!5.90e-38!45;CL:0000763!1.77e-37!112;CL:0000049!1.77e-37!112;CL:0002057!3.55e-35!42;CL:0000557!8.04e-33!71;CL:0000839!5.80e-32!70;CL:0002009!1.93e-30!65;CL:0002194!2.36e-30!63;CL:0000576!2.36e-30!63;CL:0000040!2.36e-30!63;CL:0000559!2.36e-30!63;CL:0000988!2.46e-24!182;CL:0000037!3.28e-23!172;CL:0000566!3.28e-23!172;CL:0002032!2.78e-21!165;CL:0000837!2.78e-21!165;CL:0000738!9.39e-20!140;CL:0002031!1.03e-14!124;CL:0002087!7.55e-14!119;CL:0002393!1.28e-10!9;CL:0002397!1.28e-10!9;CL:0000094!1.12e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-44;33!CL:0002057;6.98e-44;33!CL:0000576;4.24e-34;48!CL:0000473;1.90e-32;39!CL:0000234;1.90e-32;39!CL:0000766;5.40e-32;69!CL:0000094;7.85e-19;8!CL:0000763;1.80e-18;100!CL:0000875;3.31e-14;3!CL:0002396;3.31e-14;3!CL:0000081;1.64e-13;11!CL:0000097;2.20e-13;5!CL:0000771;7.75e-10;2!CL:0000738;1.48e-09;136!CL:0000163;1.85e-07;9!CL:0002087;3.67e-07;104!CL:0002393;8.88e-07;6!CL:0002397;8.88e-07;6!CL:0000775;9.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.79e-69,72;CL:0000860,6.37e-65,42;CL:0002057,6.37e-65,42;CL:0000473,5.75e-56,48;CL:0000234,5.75e-56,48;CL:0000839,1.33e-51,66;CL:0000557,9.84e-51,67;CL:0000763,4.45e-49,108;CL:0000049,4.45e-49,108;CL:0002194,1.98e-43,59;CL:0000576,1.98e-43,59;CL:0000040,1.98e-43,59;CL:0000559,1.98e-43,59;CL:0002009,8.20e-42,61;CL:0000738,6.06e-33,136;CL:0002032,3.78e-30,161;CL:0000837,3.78e-30,161;CL:0000037,1.55e-28,168;CL:0000988,1.20e-26,177;CL:0002031,3.13e-25,120;CL:0002087,2.93e-19,115;CL:0000094,1.18e-18,8;CL:0002393,6.20e-17,9;CL:0002397,6.20e-17,9;CL:0000875,3.34e-14,3;CL:0002396,3.34e-14,3;CL:0000081,2.20e-13,11;CL:0000097,2.69e-13,5;CL:0002028,2.69e-13,5;CL:0000771,7.15e-10,2;CL:0000134,5.26e-09,354;CL:0000219,7.30e-09,386;CL:0002320,1.15e-08,361;CL:0000163,2.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-46;42!CL:0000049;6.92e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-35!102;UBERON:0003061!2.49e-35!102;UBERON:0002193!4.67e-31!112;UBERON:0002371!4.30e-29!80;UBERON:0001474!1.28e-25!86;UBERON:0004765!1.27e-19!101;UBERON:0001434!1.27e-19!101;UBERON:0002405!3.65e-17!115;UBERON:0003081!1.88e-09!216;UBERON:0000178!3.27e-09!15;UBERON:0000179!3.27e-09!15;UBERON:0000463!3.27e-09!15;UBERON:0001737!2.76e-08!9;UBERON:0002204!2.47e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.33e-44,76;UBERON:0001474,3.31e-40,82;UBERON:0002390,2.09e-37,98;UBERON:0003061,2.09e-37,98;UBERON:0004765,5.17e-36,90;UBERON:0002405,1.27e-34,93;UBERON:0002193,2.97e-33,108;UBERON:0001434,1.05e-31,100;UBERON:0002204,4.14e-16,167;UBERON:0003081,2.47e-15,203;UBERON:0002384,3.35e-08,371;UBERON:0000926,3.46e-07,315;UBERON:0004120,3.46e-07,315;UBERON:0006603,3.46e-07,315 | |||
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| |||
|short_description=p3@EMR2 | |||
}} |
Revision as of 19:06, 11 September 2013
Short description: | p3@EMR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EMR2_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -172bp_to_uc010xnw.1, uc010xny.1_5end |
EntrezGene: | EMR2 |
HGNC: | 3337 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.33e-44 | 76 |
bone element | 3.31e-40 | 82 |
hematopoietic system | 2.09e-37 | 98 |
blood island | 2.09e-37 | 98 |
skeletal element | 5.17e-36 | 90 |
immune system | 1.27e-34 | 93 |
hemolymphoid system | 2.97e-33 | 108 |
skeletal system | 1.05e-31 | 100 |
musculoskeletal system | 4.14e-16 | 167 |
lateral plate mesoderm | 2.47e-15 | 203 |
connective tissue | 3.35e-08 | 371 |
mesoderm | 3.46e-07 | 315 |
mesoderm-derived structure | 3.46e-07 | 315 |
presumptive mesoderm | 3.46e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.