FFCP PHASE1:Hg19::chr19:14492045..14492066,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=976|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1711|TSSclassifier=S|UniProt=P48960|association_with_transcript=89bp_to_NM_001025160,NM_001784,NM_078481_5end|description=CAGE_peak_6_at_CD97_5end|id=chr19:14492045..14492066,+|ontology_enrichment_celltype=CL:0000738!1.90e-38!140;CL:0000037!7.50e-37!172;CL:0000566!7.50e-37!172;CL:0000988!1.17e-35!182;CL:0002032!1.63e-35!165;CL:0000837!1.63e-35!165;CL:0002031!5.82e-32!124;CL:0002087!1.80e-31!119;CL:0002057!6.29e-29!42;CL:0000860!3.88e-27!45;CL:0000766!3.67e-24!76;CL:0000763!3.38e-22!112;CL:0000049!3.38e-22!112;CL:0000557!6.72e-22!71;CL:0002009!1.08e-18!65;CL:0000839!1.46e-18!70;CL:0002194!3.52e-17!63;CL:0000576!3.52e-17!63;CL:0000040!3.52e-17!63;CL:0000559!3.52e-17!63;CL:0000542!3.71e-12!53;CL:0000051!3.71e-12!53;CL:0000838!1.08e-11!52;CL:0000134!4.47e-11!358;CL:0002320!3.44e-10!365;CL:0000084!3.76e-10!25;CL:0000827!3.76e-10!25;CL:0000791!9.67e-09!18;CL:0000789!9.67e-09!18;CL:0002420!9.67e-09!18;CL:0002419!9.67e-09!18;CL:0000790!9.67e-09!18;CL:0000219!9.81e-09!390;CL:0002393!5.89e-08!9;CL:0002397!5.89e-08!9|ontology_enrichment_celltype_v019=CL:0000860;2.86e-21;33!CL:0002057;2.86e-21;33!CL:0000766;8.23e-21;69!CL:0000576;8.49e-20;48!CL:0000473;1.63e-16;39!CL:0000234;1.63e-16;39!CL:0002087;2.35e-15;104!CL:0000624;7.69e-14;6!CL:0000875;5.07e-12;3!CL:0002396;5.07e-12;3!CL:0000623;8.71e-12;3!CL:0000084;1.46e-11;25!CL:0000738;2.17e-11;136!CL:0000763;3.64e-11;100!CL:0000791;6.95e-11;18!CL:0000789;6.95e-11;18!CL:0002419;6.95e-11;18!CL:0000094;1.95e-10;8!CL:0002393;5.09e-10;6!CL:0002397;5.09e-10;6!CL:0001014;5.99e-08;2!CL:0001016;5.99e-08;2!CL:0000542;6.83e-08;53!CL:0000988;8.47e-08;177!CL:0000081;1.67e-07;11!CL:0000097;3.23e-07;5|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-53,136;CL:0002031,4.64e-44,120;CL:0000037,4.05e-43,168;CL:0002032,1.90e-41,161;CL:0000837,1.90e-41,161;CL:0000988,2.30e-40,177;CL:0000860,4.23e-39,42;CL:0002057,4.23e-39,42;CL:0000766,4.90e-39,72;CL:0002087,8.10e-39,115;CL:0000557,1.10e-36,67;CL:0000473,1.93e-33,48;CL:0000234,1.93e-33,48;CL:0000839,1.79e-29,66;CL:0002009,1.83e-29,61;CL:0000763,4.64e-29,108;CL:0000049,4.64e-29,108;CL:0002194,1.58e-25,59;CL:0000576,1.58e-25,59;CL:0000040,1.58e-25,59;CL:0000559,1.58e-25,59;CL:0002393,2.55e-19,9;CL:0002397,2.55e-19,9;CL:0000134,2.01e-15,354;CL:0002320,6.67e-15,361;CL:0000624,4.54e-14,6;CL:0000219,4.59e-13,386;CL:0000875,5.28e-12,3;CL:0002396,5.28e-12,3;CL:0000623,1.08e-11,3;CL:0000825,1.08e-11,3;CL:0000084,1.17e-11,25;CL:0000827,1.17e-11,25;CL:0000838,2.27e-11,52;CL:0000542,4.32e-11,53;CL:0000051,4.32e-11,53;CL:0000791,5.03e-11,18;CL:0000789,5.03e-11,18;CL:0002420,5.03e-11,18;CL:0002419,5.03e-11,18;CL:0000790,5.03e-11,18;CL:0000048,8.06e-11,427;CL:0000094,1.38e-10,8;CL:0000723,1.64e-10,433;CL:0000034,4.13e-10,441;CL:0001014,5.40e-08,2;CL:0001016,5.40e-08,2;CL:0000081,1.31e-07,11;CL:0000097,2.85e-07,5;CL:0002028,2.85e-07,5|ontology_enrichment_development_v019=CL:0002057;5.67e-32;42!CL:0000790;6.95e-11;18!CL:0000049;3.36e-09;108!CL:0000051;6.83e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.58e-34!102;UBERON:0003061!2.58e-34!102;UBERON:0002193!8.77e-30!112;UBERON:0002371!4.64e-20!80;UBERON:0001474!3.91e-18!86;UBERON:0002405!1.52e-13!115;UBERON:0000178!3.56e-13!15;UBERON:0000179!3.56e-13!15;UBERON:0000463!3.56e-13!15;UBERON:0004765!9.58e-13!101;UBERON:0001434!9.58e-13!101;UBERON:0003081!2.03e-09!216;UBERON:0002384!5.21e-09!375|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-10;15!UBERON:0000179;6.20e-10;15!UBERON:0000463;6.20e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.76e-39,98;UBERON:0003061,1.76e-39,98;UBERON:0002193,5.29e-35,108;UBERON:0002371,1.68e-31,76;UBERON:0001474,1.13e-28,82;UBERON:0002405,2.25e-26,93;UBERON:0004765,1.75e-25,90;UBERON:0001434,3.24e-22,100;UBERON:0003081,1.91e-14,203;UBERON:0002384,3.43e-14,371;UBERON:0002204,1.79e-10,167;UBERON:0000178,6.22e-10,15;UBERON:0000179,6.22e-10,15;UBERON:0000463,6.22e-10,15;UBERON:0000926,7.15e-07,315;UBERON:0004120,7.15e-07,315;UBERON:0006603,7.15e-07,315|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,0.629686250509434,0.786728553697808,3.45446458287491,1.85779347979291,0,0,0,0,0.284338464974843,0.293600439334847,0,2.20598892217156,2.17010870715852,0,0,0,2.61716829803216,1.13362783106643,0.970336244751265,3.0215774797739,2.05583944010913,0.619412741790207,5.46615545412086,2.0492856522328,0.47296445977717,3.44745680736619,1.93645405075148,1.35426486594342,1.88242339542605,0.818718450173537,0.449446968890169,1.53041946185451,0.641858054152187,0.639337125799041,5.60747210317417,2.39356389145958,0.426224750532694,2.32167390902867,0.56738522469114,0,5.52747063564835,0.521482918420201,0.434377689410233,3.02699751316684,0.736555271975129,0.949387162322653,7.39393502091796,3.4016687994407,0.62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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1711 | |||
|TSSclassifier=S | |||
|UniProt=P48960 | |||
|association_with_transcript=89bp_to_NM_001025160,NM_001784,NM_078481_5end | |||
|description=CAGE_peak_6_at_CD97_5end | |||
|id=chr19:14492045..14492066,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.90e-38!140;CL:0000037!7.50e-37!172;CL:0000566!7.50e-37!172;CL:0000988!1.17e-35!182;CL:0002032!1.63e-35!165;CL:0000837!1.63e-35!165;CL:0002031!5.82e-32!124;CL:0002087!1.80e-31!119;CL:0002057!6.29e-29!42;CL:0000860!3.88e-27!45;CL:0000766!3.67e-24!76;CL:0000763!3.38e-22!112;CL:0000049!3.38e-22!112;CL:0000557!6.72e-22!71;CL:0002009!1.08e-18!65;CL:0000839!1.46e-18!70;CL:0002194!3.52e-17!63;CL:0000576!3.52e-17!63;CL:0000040!3.52e-17!63;CL:0000559!3.52e-17!63;CL:0000542!3.71e-12!53;CL:0000051!3.71e-12!53;CL:0000838!1.08e-11!52;CL:0000134!4.47e-11!358;CL:0002320!3.44e-10!365;CL:0000084!3.76e-10!25;CL:0000827!3.76e-10!25;CL:0000791!9.67e-09!18;CL:0000789!9.67e-09!18;CL:0002420!9.67e-09!18;CL:0002419!9.67e-09!18;CL:0000790!9.67e-09!18;CL:0000219!9.81e-09!390;CL:0002393!5.89e-08!9;CL:0002397!5.89e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.86e-21;33!CL:0002057;2.86e-21;33!CL:0000766;8.23e-21;69!CL:0000576;8.49e-20;48!CL:0000473;1.63e-16;39!CL:0000234;1.63e-16;39!CL:0002087;2.35e-15;104!CL:0000624;7.69e-14;6!CL:0000875;5.07e-12;3!CL:0002396;5.07e-12;3!CL:0000623;8.71e-12;3!CL:0000084;1.46e-11;25!CL:0000738;2.17e-11;136!CL:0000763;3.64e-11;100!CL:0000791;6.95e-11;18!CL:0000789;6.95e-11;18!CL:0002419;6.95e-11;18!CL:0000094;1.95e-10;8!CL:0002393;5.09e-10;6!CL:0002397;5.09e-10;6!CL:0001014;5.99e-08;2!CL:0001016;5.99e-08;2!CL:0000542;6.83e-08;53!CL:0000988;8.47e-08;177!CL:0000081;1.67e-07;11!CL:0000097;3.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-53,136;CL:0002031,4.64e-44,120;CL:0000037,4.05e-43,168;CL:0002032,1.90e-41,161;CL:0000837,1.90e-41,161;CL:0000988,2.30e-40,177;CL:0000860,4.23e-39,42;CL:0002057,4.23e-39,42;CL:0000766,4.90e-39,72;CL:0002087,8.10e-39,115;CL:0000557,1.10e-36,67;CL:0000473,1.93e-33,48;CL:0000234,1.93e-33,48;CL:0000839,1.79e-29,66;CL:0002009,1.83e-29,61;CL:0000763,4.64e-29,108;CL:0000049,4.64e-29,108;CL:0002194,1.58e-25,59;CL:0000576,1.58e-25,59;CL:0000040,1.58e-25,59;CL:0000559,1.58e-25,59;CL:0002393,2.55e-19,9;CL:0002397,2.55e-19,9;CL:0000134,2.01e-15,354;CL:0002320,6.67e-15,361;CL:0000624,4.54e-14,6;CL:0000219,4.59e-13,386;CL:0000875,5.28e-12,3;CL:0002396,5.28e-12,3;CL:0000623,1.08e-11,3;CL:0000825,1.08e-11,3;CL:0000084,1.17e-11,25;CL:0000827,1.17e-11,25;CL:0000838,2.27e-11,52;CL:0000542,4.32e-11,53;CL:0000051,4.32e-11,53;CL:0000791,5.03e-11,18;CL:0000789,5.03e-11,18;CL:0002420,5.03e-11,18;CL:0002419,5.03e-11,18;CL:0000790,5.03e-11,18;CL:0000048,8.06e-11,427;CL:0000094,1.38e-10,8;CL:0000723,1.64e-10,433;CL:0000034,4.13e-10,441;CL:0001014,5.40e-08,2;CL:0001016,5.40e-08,2;CL:0000081,1.31e-07,11;CL:0000097,2.85e-07,5;CL:0002028,2.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-32;42!CL:0000790;6.95e-11;18!CL:0000049;3.36e-09;108!CL:0000051;6.83e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.58e-34!102;UBERON:0003061!2.58e-34!102;UBERON:0002193!8.77e-30!112;UBERON:0002371!4.64e-20!80;UBERON:0001474!3.91e-18!86;UBERON:0002405!1.52e-13!115;UBERON:0000178!3.56e-13!15;UBERON:0000179!3.56e-13!15;UBERON:0000463!3.56e-13!15;UBERON:0004765!9.58e-13!101;UBERON:0001434!9.58e-13!101;UBERON:0003081!2.03e-09!216;UBERON:0002384!5.21e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-10;15!UBERON:0000179;6.20e-10;15!UBERON:0000463;6.20e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.76e-39,98;UBERON:0003061,1.76e-39,98;UBERON:0002193,5.29e-35,108;UBERON:0002371,1.68e-31,76;UBERON:0001474,1.13e-28,82;UBERON:0002405,2.25e-26,93;UBERON:0004765,1.75e-25,90;UBERON:0001434,3.24e-22,100;UBERON:0003081,1.91e-14,203;UBERON:0002384,3.43e-14,371;UBERON:0002204,1.79e-10,167;UBERON:0000178,6.22e-10,15;UBERON:0000179,6.22e-10,15;UBERON:0000463,6.22e-10,15;UBERON:0000926,7.15e-07,315;UBERON:0004120,7.15e-07,315;UBERON:0006603,7.15e-07,315 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,0.629686250509434,0.786728553697808,3.45446458287491,1.85779347979291,0,0,0,0,0.284338464974843,0.293600439334847,0,2.20598892217156,2.17010870715852,0,0,0,2.61716829803216,1.13362783106643,0.970336244751265,3.0215774797739,2.05583944010913,0.619412741790207,5.46615545412086,2.0492856522328,0.47296445977717,3.44745680736619,1.93645405075148,1.35426486594342,1.88242339542605,0.818718450173537,0.449446968890169,1.53041946185451,0.641858054152187,0.639337125799041,5.60747210317417,2.39356389145958,0.426224750532694,2.32167390902867,0.56738522469114,0,5.52747063564835,0.521482918420201,0.434377689410233,3.02699751316684,0.736555271975129,0.949387162322653,7.39393502091796,3.4016687994407,0.628975936525128,0.22465726229299,0,0,12.2555479808737,6.96208370196815,2.37463399894024,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0,0,3.05818582500183,0,0.560508562981536,0,1.7703879310245,2.75107533924415,2.46721798799411,0.668745981562712,1.30368906653436,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,2.37258501059297,0.535081656179426,0,0.113309342697566,1.91610246800961,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0.602300476311091,0.76791966692651,0,0.473554504088034,0.821127996921047,2.01606743224732,2.67440195783507,2.89648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.435758888184812,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,5.39053100406007,2.88239906833923,3.1560608356595,0.253991577168676,0,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,3.15249216323084,5.39068937148793,2.18183161675572,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.07857100409308,1.921096040462,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,0.714695326373367,0.822724546172388,2.59389324477087,1.08006287447623,0.79312517629427,0,0,0,0.371606350251437,0.144269212976445,0.213425530045242,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0.605399121573143,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0.935702702041099,0,0,1.00299045849731,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0.796991953004279,0,0,0.102268682502155,1.23084805461069,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.461701551022782,0,0.69169171316418,0,0,0.31900115973192,0,0,0,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.494255755786011,0.417687798021821,0,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0.114536596165916,0,0.288109595976299,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,3.14963448172101,1.5476039091159,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0.25426853765475,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0.988058159489721,0,0.638341257770182,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0.453411851024545,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0,0,0,1.59989916683944,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0.1637719175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| |||
|short_description=p6@CD97 | |||
}} |
Revision as of 19:03, 11 September 2013
Short description: | p6@CD97 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CD97_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_NM_001025160, NM_001784, NM_078481_5end |
EntrezGene: | CD97 |
HGNC: | 1711 |
UniProt: | P48960 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.76e-39 | 98 |
blood island | 1.76e-39 | 98 |
hemolymphoid system | 5.29e-35 | 108 |
bone marrow | 1.68e-31 | 76 |
bone element | 1.13e-28 | 82 |
immune system | 2.25e-26 | 93 |
skeletal element | 1.75e-25 | 90 |
skeletal system | 3.24e-22 | 100 |
lateral plate mesoderm | 1.91e-14 | 203 |
connective tissue | 3.43e-14 | 371 |
musculoskeletal system | 1.79e-10 | 167 |
blood | 6.22e-10 | 15 |
haemolymphatic fluid | 6.22e-10 | 15 |
organism substance | 6.22e-10 | 15 |
mesoderm | 7.15e-07 | 315 |
mesoderm-derived structure | 7.15e-07 | 315 |
presumptive mesoderm | 7.15e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.