FFCP PHASE1:Hg19::chr19:14185597..14185600,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:14185597..14185600,+|id=chr19:14185597..14185600,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000317;2.74e-12;2!CL:1000448;2.74e-12;2!CL:0002308;2.74e-12;2!CL:0002140;2.74e-12;2!CL:0002592;8.63e-09;3|ontology_enrichment_celltype_v019_2=CL:0000317,2.59e-12,2;CL:1000448,2.59e-12,2;CL:0002308,2.59e-12,2;CL:0002140,2.59e-12,2;CL:0002592,8.31e-09,3|ontology_enrichment_development_v019=UBERON:0008801;1.67e-23;1!UBERON:0006241;1.26e-08;3!UBERON:0003057;1.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;8.85e-07;4!DOID:1612;8.85e-07;4|ontology_enrichment_disease_v019_2=DOID:5093,7.70e-07,4;DOID:1612,7.70e-07,4|ontology_enrichment_uberon=UBERON:0007023!3.09e-18!115;UBERON:0001049!6.70e-13!57;UBERON:0005068!6.70e-13!57;UBERON:0006241!6.70e-13!57;UBERON:0007135!6.70e-13!57;UBERON:0001017!1.66e-09!82;UBERON:0000955!2.73e-09!69;UBERON:0006238!2.73e-09!69;UBERON:0005743!3.17e-09!86;UBERON:0002616!5.19e-09!59;UBERON:0002020!2.34e-08!34;UBERON:0003528!2.34e-08!34;UBERON:0001893!4.09e-08!34;UBERON:0002780!7.61e-08!41;UBERON:0001890!7.61e-08!41;UBERON:0006240!7.61e-08!41;UBERON:0001869!1.20e-07!32;UBERON:0002791!1.55e-07!33;UBERON:0003080!1.56e-07!42;UBERON:0000073!1.76e-07!94;UBERON:0001016!1.76e-07!94;UBERON:0003076!1.96e-07!15;UBERON:0003057!1.96e-07!15;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0000033!5.30e-07!123|ontology_enrichment_uberon_v019=UBERON:0001831;1.67e-23;1!UBERON:0001567;1.67e-23;1!UBERON:0002038;3.67e-23;1!UBERON:0009661;3.67e-23;1!UBERON:0002950;3.67e-23;1!UBERON:0001891;3.67e-23;1!UBERON:0002771;1.56e-12;2!UBERON:0001829;1.85e-12;2!UBERON:0004089;1.85e-12;2!UBERON:0002419;2.74e-12;2!UBERON:0007771;2.74e-12;2!UBERON:0003297;2.74e-12;2!UBERON:0001821;2.74e-12;2!UBERON:0003487;2.74e-12;2!UBERON:0001820;2.74e-12;2!UBERON:0003498;8.63e-09;3!UBERON:0005985;8.63e-09;3!UBERON:0001621;8.63e-09;3!UBERON:0002240;1.26e-08;3!UBERON:0005174;1.26e-08;3!UBERON:0001137;1.26e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.67e-23,1;UBERON:0001567,1.67e-23,1;UBERON:0008801,1.67e-23,1;UBERON:0002038,6.40e-23,1;UBERON:0009661,6.40e-23,1;UBERON:0002950,6.40e-23,1;UBERON:0001891,6.40e-23,1;UBERON:0009616,6.40e-23,1;UBERON:0010286,6.40e-23,1;UBERON:0002771,1.65e-12,2;UBERON:0001829,1.85e-12,2;UBERON:0004089,1.85e-12,2;UBERON:0002419,2.59e-12,2;UBERON:0007771,2.59e-12,2;UBERON:0003297,2.59e-12,2;UBERON:0001821,2.59e-12,2;UBERON:0003487,2.59e-12,2;UBERON:0001820,2.59e-12,2;UBERON:0005089,2.59e-12,2;UBERON:0005088,2.59e-12,2;UBERON:0001621,8.31e-09,3;UBERON:0002240,1.30e-08,3;UBERON:0005174,1.30e-08,3;UBERON:0001137,1.30e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17020642346017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.0898683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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:14185597..14185600,+ | |||
|id=chr19:14185597..14185600,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.74e-12;2!CL:1000448;2.74e-12;2!CL:0002308;2.74e-12;2!CL:0002140;2.74e-12;2!CL:0002592;8.63e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.59e-12,2;CL:1000448,2.59e-12,2;CL:0002308,2.59e-12,2;CL:0002140,2.59e-12,2;CL:0002592,8.31e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.67e-23;1!UBERON:0006241;1.26e-08;3!UBERON:0003057;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;8.85e-07;4!DOID:1612;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.70e-07,4;DOID:1612,7.70e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-18!115;UBERON:0001049!6.70e-13!57;UBERON:0005068!6.70e-13!57;UBERON:0006241!6.70e-13!57;UBERON:0007135!6.70e-13!57;UBERON:0001017!1.66e-09!82;UBERON:0000955!2.73e-09!69;UBERON:0006238!2.73e-09!69;UBERON:0005743!3.17e-09!86;UBERON:0002616!5.19e-09!59;UBERON:0002020!2.34e-08!34;UBERON:0003528!2.34e-08!34;UBERON:0001893!4.09e-08!34;UBERON:0002780!7.61e-08!41;UBERON:0001890!7.61e-08!41;UBERON:0006240!7.61e-08!41;UBERON:0001869!1.20e-07!32;UBERON:0002791!1.55e-07!33;UBERON:0003080!1.56e-07!42;UBERON:0000073!1.76e-07!94;UBERON:0001016!1.76e-07!94;UBERON:0003076!1.96e-07!15;UBERON:0003057!1.96e-07!15;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0000033!5.30e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.67e-23;1!UBERON:0001567;1.67e-23;1!UBERON:0002038;3.67e-23;1!UBERON:0009661;3.67e-23;1!UBERON:0002950;3.67e-23;1!UBERON:0001891;3.67e-23;1!UBERON:0002771;1.56e-12;2!UBERON:0001829;1.85e-12;2!UBERON:0004089;1.85e-12;2!UBERON:0002419;2.74e-12;2!UBERON:0007771;2.74e-12;2!UBERON:0003297;2.74e-12;2!UBERON:0001821;2.74e-12;2!UBERON:0003487;2.74e-12;2!UBERON:0001820;2.74e-12;2!UBERON:0003498;8.63e-09;3!UBERON:0005985;8.63e-09;3!UBERON:0001621;8.63e-09;3!UBERON:0002240;1.26e-08;3!UBERON:0005174;1.26e-08;3!UBERON:0001137;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.67e-23,1;UBERON:0001567,1.67e-23,1;UBERON:0008801,1.67e-23,1;UBERON:0002038,6.40e-23,1;UBERON:0009661,6.40e-23,1;UBERON:0002950,6.40e-23,1;UBERON:0001891,6.40e-23,1;UBERON:0009616,6.40e-23,1;UBERON:0010286,6.40e-23,1;UBERON:0002771,1.65e-12,2;UBERON:0001829,1.85e-12,2;UBERON:0004089,1.85e-12,2;UBERON:0002419,2.59e-12,2;UBERON:0007771,2.59e-12,2;UBERON:0003297,2.59e-12,2;UBERON:0001821,2.59e-12,2;UBERON:0003487,2.59e-12,2;UBERON:0001820,2.59e-12,2;UBERON:0005089,2.59e-12,2;UBERON:0005088,2.59e-12,2;UBERON:0001621,8.31e-09,3;UBERON:0002240,1.30e-08,3;UBERON:0005174,1.30e-08,3;UBERON:0001137,1.30e-08,3 | |||
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|short_description=p@chr19:14185597..14185600,+ | |||
}} |
Revision as of 19:01, 11 September 2013
Short description: | p@chr19:14185597..14185600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:14185597..14185600, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.59e-12 | 2 |
epithelial cell of sweat gland | 2.59e-12 | 2 |
epithelial cell of skin gland | 2.59e-12 | 2 |
acinar cell of sebaceous gland | 2.59e-12 | 2 |
smooth muscle cell of the coronary artery | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.67e-23 | 1 |
cheek | 1.67e-23 | 1 |
parotid gland primordium | 1.67e-23 | 1 |
substantia nigra | 6.40e-23 | 1 |
midbrain nucleus | 6.40e-23 | 1 |
regional part of midbrain | 6.40e-23 | 1 |
midbrain | 6.40e-23 | 1 |
presumptive midbrain | 6.40e-23 | 1 |
midbrain neural tube | 6.40e-23 | 1 |
middle temporal gyrus | 1.65e-12 | 2 |
major salivary gland | 1.85e-12 | 2 |
midface | 1.85e-12 | 2 |
skin gland | 2.59e-12 | 2 |
epidermis gland | 2.59e-12 | 2 |
gland of integumental system | 2.59e-12 | 2 |
sebaceous gland | 2.59e-12 | 2 |
skin sebaceous gland | 2.59e-12 | 2 |
sweat gland | 2.59e-12 | 2 |
sweat gland placode | 2.59e-12 | 2 |
sebaceous gland placode | 2.59e-12 | 2 |
coronary artery | 8.31e-09 | 3 |
spinal cord | 1.30e-08 | 3 |
dorsal region element | 1.30e-08 | 3 |
dorsum | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.70e-07 | 4 |
breast cancer | 7.70e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.