FFCP PHASE1:Hg19::chr19:12893132..12893144,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C704|description=CAGE_peak_at_chr19:12893132..12893144,-|id=chr19:12893132..12893144,-|ontology_enrichment_celltype=CL:0000738!1.15e-66!140;CL:0002031!2.07e-51!124;CL:0002087!5.76e-51!119;CL:0000037!6.50e-51!172;CL:0000566!6.50e-51!172;CL:0002032!4.69e-49!165;CL:0000837!4.69e-49!165;CL:0000988!4.24e-48!182;CL:0002057!4.71e-46!42;CL:0000860!4.00e-42!45;CL:0000766!4.83e-42!76;CL:0000557!3.38e-33!71;CL:0002009!1.19e-31!65;CL:0000839!3.47e-30!70;CL:0000763!1.04e-29!112;CL:0000049!1.04e-29!112;CL:0002194!2.96e-29!63;CL:0000576!2.96e-29!63;CL:0000040!2.96e-29!63;CL:0000559!2.96e-29!63;CL:0000838!1.51e-17!52;CL:0000542!4.71e-17!53;CL:0000051!4.71e-17!53;CL:0002393!5.52e-16!9;CL:0002397!5.52e-16!9;CL:0000134!4.39e-14!358;CL:0000094!5.88e-14!8;CL:0002320!2.30e-13!365;CL:0000081!6.68e-12!11;CL:0000624!7.00e-11!6;CL:0000219!7.27e-11!390;CL:0000084!1.80e-09!25;CL:0000827!1.80e-09!25;CL:0000791!3.22e-09!18;CL:0000789!3.22e-09!18;CL:0002420!3.22e-09!18;CL:0002419!3.22e-09!18;CL:0000790!3.22e-09!18;CL:0000048!5.62e-08!430;CL:0000723!1.40e-07!436;CL:0000034!1.66e-07!444|ontology_enrichment_celltype_v019=CL:0002393;1.48e-22;6!CL:0002397;1.48e-22;6!CL:0000624;3.27e-22;6!CL:0000766;2.42e-20;69!CL:0000576;6.59e-20;48!CL:0000094;2.62e-17;8!CL:0000860;3.14e-15;33!CL:0002057;3.14e-15;33!CL:0000875;6.49e-13;3!CL:0002396;6.49e-13;3!CL:0000775;9.05e-13;3!CL:0000898;1.47e-12;3!CL:0000081;2.13e-12;11!CL:0000623;7.44e-12;3!CL:0000473;8.49e-12;39!CL:0000234;8.49e-12;39!CL:0002087;8.99e-11;104!CL:0000791;2.92e-09;18!CL:0000789;2.92e-09;18!CL:0002419;2.92e-09;18!CL:0000771;3.80e-09;2!CL:0000738;7.72e-09;136!CL:0000815;1.05e-08;2!CL:0000792;1.05e-08;2!CL:0002677;1.05e-08;2!CL:0000763;7.48e-08;100|ontology_enrichment_celltype_v019_2=CL:0000738,5.68e-44,136;CL:0000766,1.63e-39,72;CL:0000860,4.86e-38,42;CL:0002057,4.86e-38,42;CL:0000037,8.92e-34,168;CL:0002393,1.52e-33,9;CL:0002397,1.52e-33,9;CL:0000473,1.40e-32,48;CL:0000234,1.40e-32,48;CL:0002032,8.99e-32,161;CL:0000837,8.99e-32,161;CL:0002031,1.29e-31,120;CL:0000988,1.44e-31,177;CL:0002087,2.36e-31,115;CL:0000557,2.35e-28,67;CL:0002009,1.72e-26,61;CL:0000839,2.59e-26,66;CL:0000763,6.22e-26,108;CL:0000049,6.22e-26,108;CL:0002194,6.04e-25,59;CL:0000576,6.04e-25,59;CL:0000040,6.04e-25,59;CL:0000559,6.04e-25,59;CL:0000624,3.41e-22,6;CL:0000094,1.92e-17,8;CL:0000775,6.13e-13,3;CL:0000875,6.89e-13,3;CL:0002396,6.89e-13,3;CL:0000081,1.70e-12,11;CL:0000898,1.90e-12,3;CL:0000623,4.74e-12,3;CL:0000825,4.74e-12,3;CL:0000134,6.62e-11,354;CL:0002320,1.66e-10,361;CL:0000771,3.24e-09,2;CL:0000791,3.30e-09,18;CL:0000789,3.30e-09,18;CL:0002420,3.30e-09,18;CL:0002419,3.30e-09,18;CL:0000790,3.30e-09,18;CL:0000219,4.24e-09,386;CL:0000815,1.37e-08,2;CL:0000792,1.37e-08,2;CL:0002677,1.37e-08,2;CL:0000034,1.93e-07,441;CL:0000048,2.18e-07,427;CL:0000723,3.74e-07,433|ontology_enrichment_development_v019=CL:0002057;1.68e-27;42!CL:0000790;2.92e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.86e-35!102;UBERON:0003061!5.86e-35!102;UBERON:0002193!2.68e-30!112;UBERON:0002371!2.42e-29!80;UBERON:0001474!2.54e-26!86;UBERON:0002405!3.00e-22!115;UBERON:0004765!2.22e-20!101;UBERON:0001434!2.22e-20!101;UBERON:0002384!2.17e-12!375;UBERON:0003081!5.30e-11!216;UBERON:0002204!1.60e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.45e-25,98;UBERON:0003061,6.45e-25,98;UBERON:0002371,2.65e-24,76;UBERON:0001474,4.30e-22,82;UBERON:0002193,5.71e-22,108;UBERON:0002405,1.10e-20,93;UBERON:0004765,1.33e-19,90;UBERON:0001434,4.73e-17,100;UBERON:0002384,5.84e-10,371;UBERON:0003081,1.56e-08,203;UBERON:0002204,6.49e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.40381113229099,2.38711957787437,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,1.54853185447552,1.1507695692886,1.2808035326455,2.36482229888585,1.37898272294647,3.22742341791913,2.70852973188684,0.564727018627814,0.545812300115692,0.898893937780338,0,0.962787081228281,3.83602275479425,0,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,1.5644487552606,2.38907729175628,0,0.368277635987565,0,4.22510572623884,5.95292039902122,5.03180749220102,6.17807471305723,2.55300717830561,1.76798145366788,5.70025487482497,4.37616689837998,5.66258876670365,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,1.1384259382189,0.587237189370939,0.764546456250458,0,1.12101712596307,0,2.16380747125216,1.57204305099666,1.64481199199607,0.167186495390678,3.259222666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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C704 | |||
|description=CAGE_peak_at_chr19:12893132..12893144,- | |||
|id=chr19:12893132..12893144,- | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-66!140;CL:0002031!2.07e-51!124;CL:0002087!5.76e-51!119;CL:0000037!6.50e-51!172;CL:0000566!6.50e-51!172;CL:0002032!4.69e-49!165;CL:0000837!4.69e-49!165;CL:0000988!4.24e-48!182;CL:0002057!4.71e-46!42;CL:0000860!4.00e-42!45;CL:0000766!4.83e-42!76;CL:0000557!3.38e-33!71;CL:0002009!1.19e-31!65;CL:0000839!3.47e-30!70;CL:0000763!1.04e-29!112;CL:0000049!1.04e-29!112;CL:0002194!2.96e-29!63;CL:0000576!2.96e-29!63;CL:0000040!2.96e-29!63;CL:0000559!2.96e-29!63;CL:0000838!1.51e-17!52;CL:0000542!4.71e-17!53;CL:0000051!4.71e-17!53;CL:0002393!5.52e-16!9;CL:0002397!5.52e-16!9;CL:0000134!4.39e-14!358;CL:0000094!5.88e-14!8;CL:0002320!2.30e-13!365;CL:0000081!6.68e-12!11;CL:0000624!7.00e-11!6;CL:0000219!7.27e-11!390;CL:0000084!1.80e-09!25;CL:0000827!1.80e-09!25;CL:0000791!3.22e-09!18;CL:0000789!3.22e-09!18;CL:0002420!3.22e-09!18;CL:0002419!3.22e-09!18;CL:0000790!3.22e-09!18;CL:0000048!5.62e-08!430;CL:0000723!1.40e-07!436;CL:0000034!1.66e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.48e-22;6!CL:0002397;1.48e-22;6!CL:0000624;3.27e-22;6!CL:0000766;2.42e-20;69!CL:0000576;6.59e-20;48!CL:0000094;2.62e-17;8!CL:0000860;3.14e-15;33!CL:0002057;3.14e-15;33!CL:0000875;6.49e-13;3!CL:0002396;6.49e-13;3!CL:0000775;9.05e-13;3!CL:0000898;1.47e-12;3!CL:0000081;2.13e-12;11!CL:0000623;7.44e-12;3!CL:0000473;8.49e-12;39!CL:0000234;8.49e-12;39!CL:0002087;8.99e-11;104!CL:0000791;2.92e-09;18!CL:0000789;2.92e-09;18!CL:0002419;2.92e-09;18!CL:0000771;3.80e-09;2!CL:0000738;7.72e-09;136!CL:0000815;1.05e-08;2!CL:0000792;1.05e-08;2!CL:0002677;1.05e-08;2!CL:0000763;7.48e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.68e-44,136;CL:0000766,1.63e-39,72;CL:0000860,4.86e-38,42;CL:0002057,4.86e-38,42;CL:0000037,8.92e-34,168;CL:0002393,1.52e-33,9;CL:0002397,1.52e-33,9;CL:0000473,1.40e-32,48;CL:0000234,1.40e-32,48;CL:0002032,8.99e-32,161;CL:0000837,8.99e-32,161;CL:0002031,1.29e-31,120;CL:0000988,1.44e-31,177;CL:0002087,2.36e-31,115;CL:0000557,2.35e-28,67;CL:0002009,1.72e-26,61;CL:0000839,2.59e-26,66;CL:0000763,6.22e-26,108;CL:0000049,6.22e-26,108;CL:0002194,6.04e-25,59;CL:0000576,6.04e-25,59;CL:0000040,6.04e-25,59;CL:0000559,6.04e-25,59;CL:0000624,3.41e-22,6;CL:0000094,1.92e-17,8;CL:0000775,6.13e-13,3;CL:0000875,6.89e-13,3;CL:0002396,6.89e-13,3;CL:0000081,1.70e-12,11;CL:0000898,1.90e-12,3;CL:0000623,4.74e-12,3;CL:0000825,4.74e-12,3;CL:0000134,6.62e-11,354;CL:0002320,1.66e-10,361;CL:0000771,3.24e-09,2;CL:0000791,3.30e-09,18;CL:0000789,3.30e-09,18;CL:0002420,3.30e-09,18;CL:0002419,3.30e-09,18;CL:0000790,3.30e-09,18;CL:0000219,4.24e-09,386;CL:0000815,1.37e-08,2;CL:0000792,1.37e-08,2;CL:0002677,1.37e-08,2;CL:0000034,1.93e-07,441;CL:0000048,2.18e-07,427;CL:0000723,3.74e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-27;42!CL:0000790;2.92e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.86e-35!102;UBERON:0003061!5.86e-35!102;UBERON:0002193!2.68e-30!112;UBERON:0002371!2.42e-29!80;UBERON:0001474!2.54e-26!86;UBERON:0002405!3.00e-22!115;UBERON:0004765!2.22e-20!101;UBERON:0001434!2.22e-20!101;UBERON:0002384!2.17e-12!375;UBERON:0003081!5.30e-11!216;UBERON:0002204!1.60e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.45e-25,98;UBERON:0003061,6.45e-25,98;UBERON:0002371,2.65e-24,76;UBERON:0001474,4.30e-22,82;UBERON:0002193,5.71e-22,108;UBERON:0002405,1.10e-20,93;UBERON:0004765,1.33e-19,90;UBERON:0001434,4.73e-17,100;UBERON:0002384,5.84e-10,371;UBERON:0003081,1.56e-08,203;UBERON:0002204,6.49e-08,167 | |||
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|short_description=p@chr19:12893132..12893144,- | |||
}} |
Revision as of 18:48, 11 September 2013
Short description: | p@chr19:12893132..12893144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12893132..12893144, - |
Coexpression cluster: | C704_Eosinophils_CD14CD16_Neutrophils_CD14_CD4_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.45e-25 | 98 |
blood island | 6.45e-25 | 98 |
bone marrow | 2.65e-24 | 76 |
bone element | 4.30e-22 | 82 |
hemolymphoid system | 5.71e-22 | 108 |
immune system | 1.10e-20 | 93 |
skeletal element | 1.33e-19 | 90 |
skeletal system | 4.73e-17 | 100 |
connective tissue | 5.84e-10 | 371 |
lateral plate mesoderm | 1.56e-08 | 203 |
musculoskeletal system | 6.49e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.