FFCP PHASE1:Hg19::chr19:12792177..12792209,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1725|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2869|TSSclassifier=S|UniProt=|association_with_transcript=-152bp_to_NM_001206974_5end|description=CAGE_peak_4_at_DHPS_5end|id=chr19:12792177..12792209,-|ontology_enrichment_celltype=CL:0000055!2.80e-08!180;CL:0002319!1.01e-07!25;CL:0000548!5.94e-07!679;CL:0000004!5.94e-07!679;CL:0000255!5.94e-07!679;CL:0000012!7.81e-07!682|ontology_enrichment_celltype_v019=CL:0000128;7.33e-10;7!CL:0000126;7.33e-10;7!CL:0000127;7.33e-10;7!CL:0002603;4.86e-09;3!CL:0000123;4.91e-07;2!CL:0000242;4.91e-07;2!CL:0002319;6.74e-07;25|ontology_enrichment_celltype_v019_2=CL:0000128,2.20e-10,7;CL:0000126,2.20e-10,7;CL:0000127,2.20e-10,7;CL:0002453,2.20e-10,7;CL:0002603,1.04e-09,3;CL:0000333,2.31e-07,41;CL:0000242,2.50e-07,2;CL:0002319,2.88e-07,25;CL:0000095,9.05e-07,17;CL:0000123,9.05e-07,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!4.58e-13!235;DOID:14566!1.06e-12!239;DOID:0050686!3.15e-11!137;DOID:2531!2.04e-09!51;DOID:0060083!2.04e-09!51;DOID:1240!6.00e-08!39|ontology_enrichment_disease_v019=DOID:5409;3.65e-07;4|ontology_enrichment_disease_v019_2=DOID:5409,8.28e-07,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0.730310090387373,0,1.60057375499824,1.63200552995402,1.56727360739044,1.71741592278634,1.09499540058307,0.502170558379211,0.305653622991805,0.246301768349837,0.550975469195755,0,0,0,0,0.30120591877825,0,0.697204805222715,0.426507697462265,0.293600439334847,0,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,1.04497483268405,0,0,0.33472061276467,0.805658634218294,1.52054421143703,0.488124115096339,0,0,0.892997282840798,0.44905874525234,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.264818361626438,0.573673241497627,0.354668382198357,1.12135520028461,0,0.49333509683432,0.311211035399766,0.404132016209064,0.326923806226917,0.302714855289863,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0.587172493218824,0.971237666208789,0.702254033511242,0,0.61417158655884,0.103325781175765,0,0,0,0,1.0100166837244,0.250237039743928,0.277064115484183,0.438977620880838,0.919463387397059,0.45071417671979,0.680593098960126,1.97328599257748,0.427114777637135,0,3.60109315301283,0.103052529238439,0,0.18611685633159,0.337552664482532,0.779496041289589,0.757301322732344,0.0920498986422993,0.161646056818812,0.710019185033229,1.10827308050404,0.67824236924195,0,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,5.29755719297581,0,0.343135620597051,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0,0.577465791044295,0,0.380508304469197,1.58040879591855,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0,1.15014803749563,0,0.176096868026452,0.207328115540772,0.144119953416961,0,0.761974731506028,0.763976851116555,0,0,0.514137463516618,1.20137223137567,0,0.672786506072164,0,0.36669142910475,0.129271715757778,3.57656445851882,0.845302752556,1.06375246633948,0,0,1.41849132023278,0.799266537048298,0,0,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.560425719967636,0,0,0.385029108839245,0.76228387266739,1.30139853857622,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.473107245101804,0,0.300946099727719,0,2.0694614258501,0.664225598535437,0.921845842708516,0,1.17480694477644,0.343143423810856,0,0,0.106727557803444,0.909382714338778,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0.657017248110473,0,0.697262270759755,0.241718899183244,0.40101294060657,0,1.03333003348146,0.728364672026868,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,1.53084334748864,0.431831832204279,1.54227252690289,0,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2869 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-152bp_to_NM_001206974_5end | |||
|description=CAGE_peak_4_at_DHPS_5end | |||
|id=chr19:12792177..12792209,- | |||
|ontology_enrichment_celltype=CL:0000055!2.80e-08!180;CL:0002319!1.01e-07!25;CL:0000548!5.94e-07!679;CL:0000004!5.94e-07!679;CL:0000255!5.94e-07!679;CL:0000012!7.81e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000128;7.33e-10;7!CL:0000126;7.33e-10;7!CL:0000127;7.33e-10;7!CL:0002603;4.86e-09;3!CL:0000123;4.91e-07;2!CL:0000242;4.91e-07;2!CL:0002319;6.74e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.20e-10,7;CL:0000126,2.20e-10,7;CL:0000127,2.20e-10,7;CL:0002453,2.20e-10,7;CL:0002603,1.04e-09,3;CL:0000333,2.31e-07,41;CL:0000242,2.50e-07,2;CL:0002319,2.88e-07,25;CL:0000095,9.05e-07,17;CL:0000123,9.05e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.58e-13!235;DOID:14566!1.06e-12!239;DOID:0050686!3.15e-11!137;DOID:2531!2.04e-09!51;DOID:0060083!2.04e-09!51;DOID:1240!6.00e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.65e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.28e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@DHPS | |||
}} |
Revision as of 18:47, 11 September 2013
Short description: | p4@DHPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DHPS_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_NM_001206974_5end |
EntrezGene: | DHPS |
HGNC: | 2869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.20e-10 | 7 |
macroglial cell | 2.20e-10 | 7 |
astrocyte | 2.20e-10 | 7 |
oligodendrocyte precursor cell | 2.20e-10 | 7 |
astrocyte of the cerebellum | 1.04e-09 | 3 |
migratory neural crest cell | 2.31e-07 | 41 |
Merkel cell | 2.50e-07 | 2 |
neural cell | 2.88e-07 | 25 |
neuron associated cell | 9.05e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.05e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.28e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.