FFCP PHASE1:Hg19::chr19:1249869..1249894,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16298 | |||
|TSSclassifier=W | |||
|UniProt=Q504T8 | |||
|association_with_transcript=0bp_to_BC060848,BC094778_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_MIDN_5end | |||
|id=chr19:1249869..1249894,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.38e-20!42;CL:0000860!8.57e-18!45;CL:0000766!3.55e-15!76;CL:0000738!3.58e-15!140;CL:0000557!1.93e-11!71;CL:0002087!6.68e-11!119;CL:0002194!2.21e-10!63;CL:0000576!2.21e-10!63;CL:0000040!2.21e-10!63;CL:0000559!2.21e-10!63;CL:0002009!2.30e-10!65;CL:0000037!1.16e-09!172;CL:0000566!1.16e-09!172;CL:0000839!1.18e-09!70;CL:0002031!1.43e-09!124;CL:0000988!3.19e-09!182;CL:0002032!3.65e-08!165;CL:0000837!3.65e-08!165;CL:0000763!2.34e-07!112;CL:0000049!2.34e-07!112;CL:0000094!6.44e-07!8;CL:0002393!9.35e-07!9;CL:0002397!9.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.42e-14;33!CL:0002057;8.42e-14;33!CL:0000576;3.54e-10;48!CL:0000473;2.39e-09;39!CL:0000234;2.39e-09;39!CL:0000766;1.50e-08;69!CL:0000094;6.41e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.38e-20,42;CL:0002057,3.38e-20,42;CL:0000766,4.11e-17,72;CL:0000473,7.94e-17,48;CL:0000234,7.94e-17,48;CL:0000738,1.93e-16,136;CL:0000557,4.33e-13,67;CL:0002194,4.71e-12,59;CL:0000576,4.71e-12,59;CL:0000040,4.71e-12,59;CL:0000559,4.71e-12,59;CL:0002087,5.06e-12,115;CL:0002009,5.36e-12,61;CL:0000839,3.99e-11,66;CL:0002031,1.44e-10,120;CL:0000037,1.74e-10,168;CL:0000988,2.17e-10,177;CL:0002032,6.48e-09,161;CL:0000837,6.48e-09,161;CL:0000763,3.08e-08,108;CL:0000049,3.08e-08,108;CL:0000094,6.44e-07,8;CL:0002393,9.35e-07,9;CL:0002397,9.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.33e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-16!102;UBERON:0003061!1.29e-16!102;UBERON:0002193!3.20e-14!112;UBERON:0002371!3.25e-11!80;UBERON:0002405!7.67e-11!115;UBERON:0001474!1.58e-09!86;UBERON:0004765!5.62e-08!101;UBERON:0001434!5.62e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-18,98;UBERON:0003061,2.73e-18,98;UBERON:0002193,1.26e-15,108;UBERON:0002371,1.04e-12,76;UBERON:0002405,7.69e-12,93;UBERON:0001474,8.64e-11,82;UBERON:0004765,1.27e-10,90;UBERON:0001434,6.87e-10,100 | |||
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| |||
|short_description=p1@MIDN | |||
}} |
Revision as of 18:45, 11 September 2013
Short description: | p1@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIDN_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_BC060848, BC094778_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | Q504T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.38e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-20 | 42 |
myeloid leukocyte | 4.11e-17 | 72 |
defensive cell | 7.94e-17 | 48 |
phagocyte | 7.94e-17 | 48 |
leukocyte | 1.93e-16 | 136 |
granulocyte monocyte progenitor cell | 4.33e-13 | 67 |
monopoietic cell | 4.71e-12 | 59 |
monocyte | 4.71e-12 | 59 |
monoblast | 4.71e-12 | 59 |
promonocyte | 4.71e-12 | 59 |
nongranular leukocyte | 5.06e-12 | 115 |
macrophage dendritic cell progenitor | 5.36e-12 | 61 |
myeloid lineage restricted progenitor cell | 3.99e-11 | 66 |
hematopoietic lineage restricted progenitor cell | 1.44e-10 | 120 |
hematopoietic stem cell | 1.74e-10 | 168 |
hematopoietic cell | 2.17e-10 | 177 |
hematopoietic oligopotent progenitor cell | 6.48e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.48e-09 | 161 |
myeloid cell | 3.08e-08 | 108 |
common myeloid progenitor | 3.08e-08 | 108 |
granulocyte | 6.44e-07 | 8 |
intermediate monocyte | 9.35e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-18 | 98 |
blood island | 2.73e-18 | 98 |
hemolymphoid system | 1.26e-15 | 108 |
bone marrow | 1.04e-12 | 76 |
immune system | 7.69e-12 | 93 |
bone element | 8.64e-11 | 82 |
skeletal element | 1.27e-10 | 90 |
skeletal system | 6.87e-10 | 100 |
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