FFCP PHASE1:Hg19::chr19:1089971..1090004,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5434|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9192|TSSclassifier=S|UniProt=P19388|association_with_transcript=-10bp_to_S42643_5end|coexpression_cluster_id=C12|description=CAGE_peak_4_at_POLR2E_5end|id=chr19:1089971..1090004,-|ontology_enrichment_celltype=CL:0000557!7.96e-26!71;CL:0002057!1.73e-24!42;CL:0000839!1.17e-22!70;CL:0000860!2.52e-22!45;CL:0002009!1.27e-21!65;CL:0000766!4.29e-20!76;CL:0000763!2.70e-19!112;CL:0000049!2.70e-19!112;CL:0002194!4.69e-19!63;CL:0000576!4.69e-19!63;CL:0000040!4.69e-19!63;CL:0000559!4.69e-19!63;CL:0000738!4.32e-15!140;CL:0002031!3.90e-13!124;CL:0002032!1.90e-12!165;CL:0000837!1.90e-12!165;CL:0000037!2.94e-12!172;CL:0000566!2.94e-12!172;CL:0000453!1.04e-11!5;CL:0000990!4.20e-11!8;CL:0000988!6.44e-11!182;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0002087!4.38e-10!119;CL:0000451!7.89e-09!10;CL:0002274!2.48e-07!5;CL:0000457!2.48e-07!5;CL:0002191!2.48e-07!5;CL:0000097!2.48e-07!5;CL:0000831!2.48e-07!5;CL:0002028!2.48e-07!5|ontology_enrichment_celltype_v019=CL:0000453;5.66e-71;5!CL:0000990;1.47e-39;8!CL:0000451;2.10e-32;10!CL:0001014;2.38e-29;2!CL:0001016;2.38e-29;2!CL:0000097;9.07e-27;5!CL:0000163;3.52e-15;9!CL:0000840;1.85e-10;5|ontology_enrichment_celltype_v019_2=CL:0000453,5.66e-71,5;CL:0000990,1.48e-39,8;CL:0000451,2.10e-32,10;CL:0001014,2.56e-29,2;CL:0001016,2.56e-29,2;CL:0000097,9.07e-27,5;CL:0002028,9.07e-27,5;CL:0000763,1.42e-17,108;CL:0000049,1.42e-17,108;CL:0000738,3.02e-16,136;CL:0000557,4.89e-16,67;CL:0000163,3.52e-15,9;CL:0002032,1.55e-13,161;CL:0000837,1.55e-13,161;CL:0000037,6.38e-13,168;CL:0000988,3.36e-12,177;CL:0002031,1.11e-10,120;CL:0000840,1.90e-10,5;CL:0001029,1.90e-10,5;CL:0000839,6.77e-10,66;CL:0000766,4.88e-09,72;CL:0002009,6.88e-08,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.15e-22!102;UBERON:0003061!5.15e-22!102;UBERON:0002371!9.82e-22!80;UBERON:0002193!4.25e-20!112;UBERON:0001474!1.72e-19!86;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0002405!7.01e-18!115;UBERON:0003081!5.46e-09!216;UBERON:0002204!2.49e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-14,76;UBERON:0001474,5.53e-13,82;UBERON:0004765,9.16e-12,90;UBERON:0002405,2.32e-11,93;UBERON:0002390,9.68e-11,98;UBERON:0003061,9.68e-11,98;UBERON:0001434,1.65e-10,100;UBERON:0002193,1.14e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0.223915474239924,0.647787332037959,0,1.16318591023652,0,0.485168122375632,1.39457422143411,0,0.619412741790207,0.575384784644301,0,0,0.344745680736619,0,0,0.941211697713023,0.818718450173537,1.12361742222542,1.53041946185451,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0.422510572623884,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,13.8909837412317,15.132595108781,12.1192736089325,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9192 | |||
|TSSclassifier=S | |||
|UniProt=P19388 | |||
|association_with_transcript=-10bp_to_S42643_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_4_at_POLR2E_5end | |||
|id=chr19:1089971..1090004,- | |||
|ontology_enrichment_celltype=CL:0000557!7.96e-26!71;CL:0002057!1.73e-24!42;CL:0000839!1.17e-22!70;CL:0000860!2.52e-22!45;CL:0002009!1.27e-21!65;CL:0000766!4.29e-20!76;CL:0000763!2.70e-19!112;CL:0000049!2.70e-19!112;CL:0002194!4.69e-19!63;CL:0000576!4.69e-19!63;CL:0000040!4.69e-19!63;CL:0000559!4.69e-19!63;CL:0000738!4.32e-15!140;CL:0002031!3.90e-13!124;CL:0002032!1.90e-12!165;CL:0000837!1.90e-12!165;CL:0000037!2.94e-12!172;CL:0000566!2.94e-12!172;CL:0000453!1.04e-11!5;CL:0000990!4.20e-11!8;CL:0000988!6.44e-11!182;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0002087!4.38e-10!119;CL:0000451!7.89e-09!10;CL:0002274!2.48e-07!5;CL:0000457!2.48e-07!5;CL:0002191!2.48e-07!5;CL:0000097!2.48e-07!5;CL:0000831!2.48e-07!5;CL:0002028!2.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.66e-71;5!CL:0000990;1.47e-39;8!CL:0000451;2.10e-32;10!CL:0001014;2.38e-29;2!CL:0001016;2.38e-29;2!CL:0000097;9.07e-27;5!CL:0000163;3.52e-15;9!CL:0000840;1.85e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.66e-71,5;CL:0000990,1.48e-39,8;CL:0000451,2.10e-32,10;CL:0001014,2.56e-29,2;CL:0001016,2.56e-29,2;CL:0000097,9.07e-27,5;CL:0002028,9.07e-27,5;CL:0000763,1.42e-17,108;CL:0000049,1.42e-17,108;CL:0000738,3.02e-16,136;CL:0000557,4.89e-16,67;CL:0000163,3.52e-15,9;CL:0002032,1.55e-13,161;CL:0000837,1.55e-13,161;CL:0000037,6.38e-13,168;CL:0000988,3.36e-12,177;CL:0002031,1.11e-10,120;CL:0000840,1.90e-10,5;CL:0001029,1.90e-10,5;CL:0000839,6.77e-10,66;CL:0000766,4.88e-09,72;CL:0002009,6.88e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.15e-22!102;UBERON:0003061!5.15e-22!102;UBERON:0002371!9.82e-22!80;UBERON:0002193!4.25e-20!112;UBERON:0001474!1.72e-19!86;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0002405!7.01e-18!115;UBERON:0003081!5.46e-09!216;UBERON:0002204!2.49e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-14,76;UBERON:0001474,5.53e-13,82;UBERON:0004765,9.16e-12,90;UBERON:0002405,2.32e-11,93;UBERON:0002390,9.68e-11,98;UBERON:0003061,9.68e-11,98;UBERON:0001434,1.65e-10,100;UBERON:0002193,1.14e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0.223915474239924,0.647787332037959,0,1.16318591023652,0,0.485168122375632,1.39457422143411,0,0.619412741790207,0.575384784644301,0,0,0.344745680736619,0,0,0.941211697713023,0.818718450173537,1.12361742222542,1.53041946185451,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0.422510572623884,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,13.8909837412317,15.132595108781,12.1192736089325,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04953004792701,3.86900977278975,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87150772098471,9.16767398162205,9.32322747258312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@POLR2E | |||
}} |
Revision as of 18:36, 11 September 2013
Short description: | p4@POLR2E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_POLR2E_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -10bp_to_S42643_5end |
EntrezGene: | POLR2E |
HGNC: | 9192 |
UniProt: | P19388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.66e-71 | 5 |
conventional dendritic cell | 1.48e-39 | 8 |
dendritic cell | 2.10e-32 | 10 |
CD1a-positive Langerhans cell | 2.56e-29 | 2 |
immature CD1a-positive Langerhans cell | 2.56e-29 | 2 |
mast cell | 9.07e-27 | 5 |
basophil mast progenitor cell | 9.07e-27 | 5 |
myeloid cell | 1.42e-17 | 108 |
common myeloid progenitor | 1.42e-17 | 108 |
leukocyte | 3.02e-16 | 136 |
granulocyte monocyte progenitor cell | 4.89e-16 | 67 |
endocrine cell | 3.52e-15 | 9 |
hematopoietic oligopotent progenitor cell | 1.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-13 | 161 |
hematopoietic stem cell | 6.38e-13 | 168 |
hematopoietic cell | 3.36e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.11e-10 | 120 |
immature conventional dendritic cell | 1.90e-10 | 5 |
common dendritic progenitor | 1.90e-10 | 5 |
myeloid lineage restricted progenitor cell | 6.77e-10 | 66 |
myeloid leukocyte | 4.88e-09 | 72 |
macrophage dendritic cell progenitor | 6.88e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.60e-14 | 76 |
bone element | 5.53e-13 | 82 |
skeletal element | 9.16e-12 | 90 |
immune system | 2.32e-11 | 93 |
hematopoietic system | 9.68e-11 | 98 |
blood island | 9.68e-11 | 98 |
skeletal system | 1.65e-10 | 100 |
hemolymphoid system | 1.14e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.