FFCP PHASE1:Hg19::chr18:56815532..56815544,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C94|description=CAGE_peak_at_chr18:56815532..56815544,+|id=chr18:56815532..56815544,+|ontology_enrichment_celltype=CL:0000167!1.88e-21!1;CL:0000164!1.88e-21!1;CL:0000502!1.88e-21!1;CL:0000172!1.88e-21!1;CL:0000173!1.88e-21!1;CL:0002351!1.88e-21!1;CL:0002553!2.82e-21!1|ontology_enrichment_celltype_v019=CL:0000167;9.91e-41;1!CL:0000164;9.91e-41;1!CL:0000502;9.91e-41;1!CL:0000172;9.91e-41;1!CL:0000173;9.91e-41;1!CL:0002553;2.21e-40;1!CL:0000082;2.36e-09;19|ontology_enrichment_celltype_v019_2=CL:0000167,9.91e-41,1;CL:0000164,9.91e-41,1;CL:0000502,9.91e-41,1;CL:0000172,9.91e-41,1;CL:0000173,9.91e-41,1;CL:0002351,9.91e-41,1;CL:0002553,2.21e-40,1;CL:0000082,2.36e-09,19|ontology_enrichment_development_v019=CL:0002351;9.91e-41;1|ontology_enrichment_disease=DOID:4430!1.88e-21!1|ontology_enrichment_disease_v019=DOID:4430;9.91e-41;1!DOID:1324;1.42e-11;15!DOID:5409;3.10e-11;4!DOID:0050615;6.45e-11;16!DOID:4362;3.49e-09;5!DOID:169;5.92e-08;6!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7|ontology_enrichment_disease_v019_2=DOID:4430,9.91e-41,1;DOID:1324,1.42e-11,15;DOID:5409,3.10e-11,4;DOID:0050615,6.45e-11,16;DOID:4362,3.49e-09,5;DOID:169,5.92e-08,6;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7|ontology_enrichment_uberon=UBERON:0001736!5.16e-21!1;UBERON:0006298!5.16e-21!1;UBERON:0001829!3.35e-11!2;UBERON:0002048!8.25e-09!22;UBERON:0000117!8.25e-09!22;UBERON:0000171!8.25e-09!22;UBERON:0000170!8.25e-09!22;UBERON:0005597!8.25e-09!22;UBERON:0000118!8.25e-09!22|ontology_enrichment_uberon_v019=UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10545517115895,0,0,0,0,4.98177383770023,0,0,68.6663252687823,0,46.1926032319187,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:56815532..56815544,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr18:56815532..56815544,+ | |||
|id=chr18:56815532..56815544,+ | |||
|ontology_enrichment_celltype=CL:0000167!1.88e-21!1;CL:0000164!1.88e-21!1;CL:0000502!1.88e-21!1;CL:0000172!1.88e-21!1;CL:0000173!1.88e-21!1;CL:0002351!1.88e-21!1;CL:0002553!2.82e-21!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;9.91e-41;1!CL:0000164;9.91e-41;1!CL:0000502;9.91e-41;1!CL:0000172;9.91e-41;1!CL:0000173;9.91e-41;1!CL:0002553;2.21e-40;1!CL:0000082;2.36e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.91e-41,1;CL:0000164,9.91e-41,1;CL:0000502,9.91e-41,1;CL:0000172,9.91e-41,1;CL:0000173,9.91e-41,1;CL:0002351,9.91e-41,1;CL:0002553,2.21e-40,1;CL:0000082,2.36e-09,19 | |||
|ontology_enrichment_development_v019=CL:0002351;9.91e-41;1 | |||
|ontology_enrichment_disease=DOID:4430!1.88e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;9.91e-41;1!DOID:1324;1.42e-11;15!DOID:5409;3.10e-11;4!DOID:0050615;6.45e-11;16!DOID:4362;3.49e-09;5!DOID:169;5.92e-08;6!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.91e-41,1;DOID:1324,1.42e-11,15;DOID:5409,3.10e-11,4;DOID:0050615,6.45e-11,16;DOID:4362,3.49e-09,5;DOID:169,5.92e-08,6;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001736!5.16e-21!1;UBERON:0006298!5.16e-21!1;UBERON:0001829!3.35e-11!2;UBERON:0002048!8.25e-09!22;UBERON:0000117!8.25e-09!22;UBERON:0000171!8.25e-09!22;UBERON:0000170!8.25e-09!22;UBERON:0005597!8.25e-09!22;UBERON:0000118!8.25e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10545517115895,0,0,0,0,4.98177383770023,0,0,68.6663252687823,0,46.1926032319187,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:56815532..56815544,+ | |||
}} |
Revision as of 17:54, 11 September 2013
Short description: | p@chr18:56815532..56815544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:56815532..56815544, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.91e-41 | 1 |
enteroendocrine cell | 9.91e-41 | 1 |
type D enteroendocrine cell | 9.91e-41 | 1 |
somatostatin secreting cell | 9.91e-41 | 1 |
pancreatic D cell | 9.91e-41 | 1 |
progenitor cell of endocrine pancreas | 9.91e-41 | 1 |
lung fibroblast | 2.21e-40 | 1 |
epithelial cell of lung | 2.36e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 2.36e-09 | 19 |
lung epithelium | 2.36e-09 | 19 |
lung | 3.27e-08 | 22 |
respiratory tube | 3.27e-08 | 22 |
respiration organ | 3.27e-08 | 22 |
pair of lungs | 3.27e-08 | 22 |
lung primordium | 3.27e-08 | 22 |
lung bud | 3.27e-08 | 22 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.91e-41 | 1 |
lung cancer | 1.42e-11 | 15 |
lung small cell carcinoma | 3.10e-11 | 4 |
respiratory system cancer | 6.45e-11 | 16 |
cervical cancer | 3.49e-09 | 5 |
neuroendocrine tumor | 5.92e-08 | 6 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.