FFCP PHASE1:Hg19::chr18:43754091..43754112,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147339|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28172|TSSclassifier=S|UniProt=Q96B23|association_with_transcript=103bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end|coexpression_cluster_id=C17|description=CAGE_peak_4_at_C18orf25_5end|id=chr18:43754091..43754112,+|ontology_enrichment_celltype=CL:0000738!9.61e-24!140;CL:0000037!2.08e-23!172;CL:0000566!2.08e-23!172;CL:0000988!4.44e-22!182;CL:0002032!2.89e-20!165;CL:0000837!2.89e-20!165;CL:0002031!1.34e-16!124;CL:0002087!8.09e-16!119;CL:0000542!3.21e-11!53;CL:0000051!3.21e-11!53;CL:0000838!5.23e-11!52;CL:0000763!6.88e-10!112;CL:0000049!6.88e-10!112;CL:0000766!6.97e-10!76;CL:0002057!1.19e-09!42;CL:0000860!4.35e-09!45;CL:0000557!6.10e-08!71|ontology_enrichment_celltype_v019=CL:0000860;9.95e-14;33!CL:0002057;9.95e-14;33!CL:0000473;5.07e-09;39!CL:0000234;5.07e-09;39!CL:0000094;6.16e-09;8!CL:0000081;1.08e-07;11!CL:0002087;2.33e-07;104!CL:0000576;3.44e-07;48!CL:0000766;3.82e-07;69|ontology_enrichment_celltype_v019_2=CL:0000738,2.91e-28,136;CL:0000988,1.50e-25,177;CL:0000037,2.23e-25,168;CL:0002032,5.45e-21,161;CL:0000837,5.45e-21,161;CL:0002031,1.14e-18,120;CL:0002087,1.07e-17,115;CL:0000766,6.02e-15,72;CL:0000860,4.68e-14,42;CL:0002057,4.68e-14,42;CL:0000763,5.26e-12,108;CL:0000049,5.26e-12,108;CL:0000557,1.02e-11,67;CL:0000473,4.51e-11,48;CL:0000234,4.51e-11,48;CL:0000094,2.86e-09,8;CL:0000839,3.43e-09,66;CL:0000542,3.57e-09,53;CL:0000051,3.57e-09,53;CL:0002009,4.96e-09,61;CL:0000838,7.22e-09,52;CL:0000081,6.01e-08,11;CL:0002194,6.80e-08,59;CL:0000576,6.80e-08,59;CL:0000040,6.80e-08,59;CL:0000559,6.80e-08,59|ontology_enrichment_development_v019=CL:0002057;1.77e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.14e-09!102;UBERON:0003061!3.14e-09!102;UBERON:0002193!2.55e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.19e-15,98;UBERON:0003061,5.19e-15,98;UBERON:0002193,1.46e-13,108;UBERON:0002371,8.03e-10,76;UBERON:0002405,1.17e-09,93;UBERON:0001474,7.35e-09,82;UBERON:0004765,2.11e-08,90|phase1_expression=0.363356758541113,0.856402095563933,1.40954404095971,1.0007329835313,0,0,0,0,0,1.47440361900905,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.410623275218653,0.376627918784408,0.840547463227464,0.821005894499457,0.708397031823113,1.96682138424452,4.98978217526377,4.02521920621798,0,0.30120591877825,0,1.00707360754392,0.853015394924529,4.69760702935756,6.64794490238253,4.61252229181326,3.90619567288533,0,0,0.515151135268373,1.16318591023652,1.13362783106643,0.970336244751265,1.62700325833979,1.6446715520873,3.71647645074124,1.43846196161075,1.2808035326455,2.36482229888585,2.06847408441971,4.51839278508678,4.06279459783025,1.50593871634084,1.91034305040492,2.47195832889593,2.14258724659632,0.320929027076094,4.47535988059329,1.64925650093358,1.19678194572979,2.13112375266347,2.32167390902867,0,1.86846674698672,3.01498398308092,3.65038042894141,3.04064382587163,3.63239701580021,2.20966581592539,1.89877432464531,0.422510572623884,0.212604299965044,0.419317291016752,0.22465726229299,1.20141514273205,0.32145117339416,0,0.39783335439818,0.182664153764634,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,2.84606484554724,2.34894875748376,4.58727873750275,13.2171328579026,13.4522055115569,1.31692042387539,5.50787356318733,11.3973121197258,6.16804496998528,0.83593247695339,2.60737813306872,1.89379122293893,0,0.445641827540694,0.883817722424512,1.10766947291811,0.270803863765016,0.25618263945135,1.43065282315866,0.493313713811028,1.93445012450094,2.31842468588042,2.07601188426885,1.87278579662799,0,0.793165398882963,1.53288197440768,1.37450978193052,2.02415753615602,0.637130828648193,0,0,0.602300476311091,0.511946444617674,0,0.710331756132051,0.821127996921047,7.66105624253983,9.62784704820626,6.22744936696036,0,0,0.12786256184353,0,0,0,0,1.45990461090791,0.756278537312543,1.55210578223795,0.966182642624386,0.916853528483988,0,0,0.649094787309367,0.870648686496336,0.797747763113191,4.5313218618015,12.5838880371628,9.28643753323912,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0,7.9068250461638,11.6334079244498,0.436094052142534,0,0.506522046658319,0.397227542439656,0.286836620748814,0.354668382198357,1.68203280042692,0,1.72667283892012,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0,0.485618833104395,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.27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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28172 | |||
|TSSclassifier=S | |||
|UniProt=Q96B23 | |||
|association_with_transcript=103bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_C18orf25_5end | |||
|id=chr18:43754091..43754112,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.61e-24!140;CL:0000037!2.08e-23!172;CL:0000566!2.08e-23!172;CL:0000988!4.44e-22!182;CL:0002032!2.89e-20!165;CL:0000837!2.89e-20!165;CL:0002031!1.34e-16!124;CL:0002087!8.09e-16!119;CL:0000542!3.21e-11!53;CL:0000051!3.21e-11!53;CL:0000838!5.23e-11!52;CL:0000763!6.88e-10!112;CL:0000049!6.88e-10!112;CL:0000766!6.97e-10!76;CL:0002057!1.19e-09!42;CL:0000860!4.35e-09!45;CL:0000557!6.10e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.95e-14;33!CL:0002057;9.95e-14;33!CL:0000473;5.07e-09;39!CL:0000234;5.07e-09;39!CL:0000094;6.16e-09;8!CL:0000081;1.08e-07;11!CL:0002087;2.33e-07;104!CL:0000576;3.44e-07;48!CL:0000766;3.82e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.91e-28,136;CL:0000988,1.50e-25,177;CL:0000037,2.23e-25,168;CL:0002032,5.45e-21,161;CL:0000837,5.45e-21,161;CL:0002031,1.14e-18,120;CL:0002087,1.07e-17,115;CL:0000766,6.02e-15,72;CL:0000860,4.68e-14,42;CL:0002057,4.68e-14,42;CL:0000763,5.26e-12,108;CL:0000049,5.26e-12,108;CL:0000557,1.02e-11,67;CL:0000473,4.51e-11,48;CL:0000234,4.51e-11,48;CL:0000094,2.86e-09,8;CL:0000839,3.43e-09,66;CL:0000542,3.57e-09,53;CL:0000051,3.57e-09,53;CL:0002009,4.96e-09,61;CL:0000838,7.22e-09,52;CL:0000081,6.01e-08,11;CL:0002194,6.80e-08,59;CL:0000576,6.80e-08,59;CL:0000040,6.80e-08,59;CL:0000559,6.80e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.14e-09!102;UBERON:0003061!3.14e-09!102;UBERON:0002193!2.55e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.19e-15,98;UBERON:0003061,5.19e-15,98;UBERON:0002193,1.46e-13,108;UBERON:0002371,8.03e-10,76;UBERON:0002405,1.17e-09,93;UBERON:0001474,7.35e-09,82;UBERON:0004765,2.11e-08,90 | |||
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| |||
|short_description=p4@C18orf25 | |||
}} |
Revision as of 17:34, 11 September 2013
Short description: | p4@C18orf25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C18orf25_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 103bp_to_ENST00000282059, ENST00000321319, NM_001008239, NM_145055, uc002lbw.2, uc002lbx.2_5end |
EntrezGene: | C18orf25 |
HGNC: | 28172 |
UniProt: | Q96B23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.91e-28 | 136 |
hematopoietic cell | 1.50e-25 | 177 |
hematopoietic stem cell | 2.23e-25 | 168 |
hematopoietic oligopotent progenitor cell | 5.45e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.45e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.14e-18 | 120 |
nongranular leukocyte | 1.07e-17 | 115 |
myeloid leukocyte | 6.02e-15 | 72 |
classical monocyte | 4.68e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.68e-14 | 42 |
myeloid cell | 5.26e-12 | 108 |
common myeloid progenitor | 5.26e-12 | 108 |
granulocyte monocyte progenitor cell | 1.02e-11 | 67 |
defensive cell | 4.51e-11 | 48 |
phagocyte | 4.51e-11 | 48 |
granulocyte | 2.86e-09 | 8 |
myeloid lineage restricted progenitor cell | 3.43e-09 | 66 |
lymphocyte | 3.57e-09 | 53 |
common lymphoid progenitor | 3.57e-09 | 53 |
macrophage dendritic cell progenitor | 4.96e-09 | 61 |
lymphoid lineage restricted progenitor cell | 7.22e-09 | 52 |
blood cell | 6.01e-08 | 11 |
monopoietic cell | 6.80e-08 | 59 |
monocyte | 6.80e-08 | 59 |
monoblast | 6.80e-08 | 59 |
promonocyte | 6.80e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.19e-15 | 98 |
blood island | 5.19e-15 | 98 |
hemolymphoid system | 1.46e-13 | 108 |
bone marrow | 8.03e-10 | 76 |
immune system | 1.17e-09 | 93 |
bone element | 7.35e-09 | 82 |
skeletal element | 2.11e-08 | 90 |
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