FFCP PHASE1:Hg19::chr18:43405471..43405485,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=284266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27596|TSSclassifier=S|UniProt=Q6ZMC9|association_with_transcript=-59bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end|description=CAGE_peak_6_at_SIGLEC15_5end|id=chr18:43405471..43405485,+|ontology_enrichment_celltype=CL:0000055!1.41e-13!180;CL:0000048!1.65e-10!430;CL:0000723!5.43e-10!436;CL:0000034!2.49e-09!444;CL:0002371!6.99e-09!591;CL:0000057!1.53e-08!75;CL:0000680!1.72e-08!57;CL:0000056!1.72e-08!57;CL:0000355!1.72e-08!57;CL:0000548!2.62e-08!679;CL:0000004!2.62e-08!679;CL:0000255!2.62e-08!679;CL:0000012!4.15e-08!682;CL:0000222!1.74e-07!119;CL:0000183!1.81e-07!59;CL:0000359!4.77e-07!32;CL:0000144!4.80e-07!625;CL:0000187!8.19e-07!54|ontology_enrichment_celltype_v019=CL:0000650;7.14e-19;2!CL:1000500;7.14e-19;2!CL:1000618;7.14e-19;2!CL:1001318;7.14e-19;2!CL:0002173;7.14e-19;2!CL:0000235;5.04e-14;6!CL:0000222;1.19e-10;1!CL:0000228;2.62e-10;1!CL:0002372;2.62e-10;1!CL:0000669;6.53e-10;4!CL:0002539;7.33e-09;10|ontology_enrichment_celltype_v019_2=CL:0000650,8.59e-19,2;CL:1000500,8.59e-19,2;CL:1000618,8.59e-19,2;CL:1001318,8.59e-19,2;CL:0002173,8.59e-19,2;CL:0000235,4.51e-14,6;CL:0000228,2.28e-10,1;CL:0002372,2.28e-10,1;CL:0000669,7.16e-10,4;CL:0002539,6.50e-09,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060085;6.73e-11;1!DOID:3165;6.73e-11;1!DOID:0060121;6.73e-11;1!DOID:2438;6.73e-11;1!DOID:4418;6.73e-11;1!DOID:3112;2.62e-10;1|ontology_enrichment_disease_v019_2=DOID:0060085,6.73e-11,1;DOID:3165,6.73e-11,1;DOID:0060121,6.73e-11,1;DOID:2438,6.73e-11,1;DOID:4418,6.73e-11,1;DOID:3112,3.29e-10,1|ontology_enrichment_uberon=UBERON:0001637!7.24e-10!42;UBERON:0003509!7.24e-10!42;UBERON:0004572!7.24e-10!42;UBERON:0002204!7.31e-10!167;UBERON:0004573!9.84e-09!33;UBERON:0004571!9.84e-09!33;UBERON:0000914!1.69e-08!83;UBERON:0002329!1.69e-08!83;UBERON:0003077!1.69e-08!83;UBERON:0003059!1.69e-08!83;UBERON:0007282!1.69e-08!83;UBERON:0009618!1.69e-08!83;UBERON:0007285!1.69e-08!83;UBERON:0003914!1.84e-08!118;UBERON:0003081!4.37e-08!216;UBERON:0004872!5.57e-08!84;UBERON:0001981!1.51e-07!60;UBERON:0007500!1.51e-07!60;UBERON:0004537!1.51e-07!60;UBERON:0006965!1.51e-07!60;UBERON:0001134!1.68e-07!61;UBERON:0002036!1.68e-07!61;UBERON:0003082!1.68e-07!61;UBERON:0005256!2.07e-07!143;UBERON:0002385!4.67e-07!63;UBERON:0001015!4.67e-07!63;UBERON:0000383!4.67e-07!63;UBERON:0000055!4.85e-07!69|ontology_enrichment_uberon_v019=UBERON:0003567;7.14e-19;2!UBERON:0003838;7.14e-19;2!UBERON:0003586;7.14e-19;2!UBERON:0005169;7.14e-19;2!UBERON:0002321;7.14e-19;2!UBERON:0005215;7.14e-19;2!UBERON:0002303;7.14e-19;2!UBERON:0002319;7.14e-19;2!UBERON:0003891;6.53e-10;4!UBERON:0004237;7.33e-09;10!UBERON:0004695;7.33e-09;10!UBERON:0002111;7.33e-09;10!UBERON:0004178;7.33e-09;10|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.59e-19,2;UBERON:0003838,8.59e-19,2;UBERON:0003586,8.59e-19,2;UBERON:0005169,8.59e-19,2;UBERON:0002321,8.59e-19,2;UBERON:0005215,8.59e-19,2;UBERON:0002303,8.59e-19,2;UBERON:0002319,8.59e-19,2;UBERON:0003891,7.16e-10,4;UBERON:0004237,6.50e-09,10;UBERON:0004695,6.50e-09,10;UBERON:0002111,6.50e-09,10;UBERON:0004178,6.50e-09,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,4.03395087871065,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,1.6194683300949,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0.453728732640084,0,0,0,0.300091096084402,0,0,0,0.675105328965065,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,1.63802985597466,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,0.87192013766656,0.2933531432838,0.517086863031111,0,0,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=284266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27596 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZMC9 | |||
|association_with_transcript=-59bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | |||
|description=CAGE_peak_6_at_SIGLEC15_5end | |||
|id=chr18:43405471..43405485,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.41e-13!180;CL:0000048!1.65e-10!430;CL:0000723!5.43e-10!436;CL:0000034!2.49e-09!444;CL:0002371!6.99e-09!591;CL:0000057!1.53e-08!75;CL:0000680!1.72e-08!57;CL:0000056!1.72e-08!57;CL:0000355!1.72e-08!57;CL:0000548!2.62e-08!679;CL:0000004!2.62e-08!679;CL:0000255!2.62e-08!679;CL:0000012!4.15e-08!682;CL:0000222!1.74e-07!119;CL:0000183!1.81e-07!59;CL:0000359!4.77e-07!32;CL:0000144!4.80e-07!625;CL:0000187!8.19e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.14e-19;2!CL:1000500;7.14e-19;2!CL:1000618;7.14e-19;2!CL:1001318;7.14e-19;2!CL:0002173;7.14e-19;2!CL:0000235;5.04e-14;6!CL:0000222;1.19e-10;1!CL:0000228;2.62e-10;1!CL:0002372;2.62e-10;1!CL:0000669;6.53e-10;4!CL:0002539;7.33e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.59e-19,2;CL:1000500,8.59e-19,2;CL:1000618,8.59e-19,2;CL:1001318,8.59e-19,2;CL:0002173,8.59e-19,2;CL:0000235,4.51e-14,6;CL:0000228,2.28e-10,1;CL:0002372,2.28e-10,1;CL:0000669,7.16e-10,4;CL:0002539,6.50e-09,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.73e-11;1!DOID:3165;6.73e-11;1!DOID:0060121;6.73e-11;1!DOID:2438;6.73e-11;1!DOID:4418;6.73e-11;1!DOID:3112;2.62e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.73e-11,1;DOID:3165,6.73e-11,1;DOID:0060121,6.73e-11,1;DOID:2438,6.73e-11,1;DOID:4418,6.73e-11,1;DOID:3112,3.29e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.24e-10!42;UBERON:0003509!7.24e-10!42;UBERON:0004572!7.24e-10!42;UBERON:0002204!7.31e-10!167;UBERON:0004573!9.84e-09!33;UBERON:0004571!9.84e-09!33;UBERON:0000914!1.69e-08!83;UBERON:0002329!1.69e-08!83;UBERON:0003077!1.69e-08!83;UBERON:0003059!1.69e-08!83;UBERON:0007282!1.69e-08!83;UBERON:0009618!1.69e-08!83;UBERON:0007285!1.69e-08!83;UBERON:0003914!1.84e-08!118;UBERON:0003081!4.37e-08!216;UBERON:0004872!5.57e-08!84;UBERON:0001981!1.51e-07!60;UBERON:0007500!1.51e-07!60;UBERON:0004537!1.51e-07!60;UBERON:0006965!1.51e-07!60;UBERON:0001134!1.68e-07!61;UBERON:0002036!1.68e-07!61;UBERON:0003082!1.68e-07!61;UBERON:0005256!2.07e-07!143;UBERON:0002385!4.67e-07!63;UBERON:0001015!4.67e-07!63;UBERON:0000383!4.67e-07!63;UBERON:0000055!4.85e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;7.14e-19;2!UBERON:0003838;7.14e-19;2!UBERON:0003586;7.14e-19;2!UBERON:0005169;7.14e-19;2!UBERON:0002321;7.14e-19;2!UBERON:0005215;7.14e-19;2!UBERON:0002303;7.14e-19;2!UBERON:0002319;7.14e-19;2!UBERON:0003891;6.53e-10;4!UBERON:0004237;7.33e-09;10!UBERON:0004695;7.33e-09;10!UBERON:0002111;7.33e-09;10!UBERON:0004178;7.33e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.59e-19,2;UBERON:0003838,8.59e-19,2;UBERON:0003586,8.59e-19,2;UBERON:0005169,8.59e-19,2;UBERON:0002321,8.59e-19,2;UBERON:0005215,8.59e-19,2;UBERON:0002303,8.59e-19,2;UBERON:0002319,8.59e-19,2;UBERON:0003891,7.16e-10,4;UBERON:0004237,6.50e-09,10;UBERON:0004695,6.50e-09,10;UBERON:0002111,6.50e-09,10;UBERON:0004178,6.50e-09,10 | |||
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|short_description=p6@SIGLEC15 | |||
}} |
Revision as of 17:32, 11 September 2013
Short description: | p6@SIGLEC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SIGLEC15_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000389474, NM_213602, uc002lbl.1_5end |
EntrezGene: | SIGLEC15 |
HGNC: | 27596 |
UniProt: | Q6ZMC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.59e-19 | 2 |
kidney interstitial cell | 8.59e-19 | 2 |
juxtaglomerular complex cell | 8.59e-19 | 2 |
renal interstitial pericyte | 8.59e-19 | 2 |
extraglomerular mesangial cell | 8.59e-19 | 2 |
macrophage | 4.51e-14 | 6 |
multinucleate cell | 2.28e-10 | 1 |
myotube | 2.28e-10 | 1 |
pericyte cell | 7.16e-10 | 4 |
aortic smooth muscle cell | 6.50e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 8.59e-19 | 2 |
abdominal segment connective tissue | 8.59e-19 | 2 |
trunk connective tissue | 8.59e-19 | 2 |
interstitial tissue | 8.59e-19 | 2 |
extraglomerular mesangium | 8.59e-19 | 2 |
kidney interstitium | 8.59e-19 | 2 |
juxtaglomerular apparatus | 8.59e-19 | 2 |
mesangium | 8.59e-19 | 2 |
stroma | 7.16e-10 | 4 |
blood vessel smooth muscle | 6.50e-09 | 10 |
arterial system smooth muscle | 6.50e-09 | 10 |
artery smooth muscle tissue | 6.50e-09 | 10 |
aorta smooth muscle tissue | 6.50e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.73e-11 | 1 |
skin benign neoplasm | 6.73e-11 | 1 |
integumentary system benign neoplasm | 6.73e-11 | 1 |
dermis tumor | 6.73e-11 | 1 |
cutaneous fibrous histiocytoma | 6.73e-11 | 1 |
papillary adenocarcinoma | 3.29e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.