FFCP PHASE1:Hg19::chr18:42260920..42260951,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26040|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15573|TSSclassifier=S|UniProt=Q9Y6X0|association_with_transcript=57bp_to_ENST00000282030,NM_015559,uc010dni.2_5end|coexpression_cluster_id=C3720|description=CAGE_peak_4_at_SETBP1_5end|id=chr18:42260920..42260951,+|ontology_enrichment_celltype=CL:0000236!2.15e-08!14;CL:0000945!9.39e-08!24;CL:0000826!9.39e-08!24|ontology_enrichment_celltype_v019=CL:0000236;9.41e-15;13!CL:0000945;2.58e-14;24|ontology_enrichment_celltype_v019_2=CL:0000236,3.04e-16,14;CL:0000945,1.34e-14,24;CL:0000826,1.34e-14,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.18e-35!115;UBERON:0001017!1.26e-20!82;UBERON:0000073!8.39e-20!94;UBERON:0001016!8.39e-20!94;UBERON:0005743!1.22e-19!86;UBERON:0004121!3.19e-18!169;UBERON:0001049!6.37e-18!57;UBERON:0005068!6.37e-18!57;UBERON:0006241!6.37e-18!57;UBERON:0007135!6.37e-18!57;UBERON:0002616!8.72e-18!59;UBERON:0000924!5.61e-17!173;UBERON:0006601!5.61e-17!173;UBERON:0000955!8.74e-17!69;UBERON:0006238!8.74e-17!69;UBERON:0000153!1.04e-15!129;UBERON:0007811!1.04e-15!129;UBERON:0000033!6.12e-15!123;UBERON:0003075!5.17e-14!86;UBERON:0007284!5.17e-14!86;UBERON:0003080!3.90e-13!42;UBERON:0001893!7.26e-13!34;UBERON:0002780!1.24e-12!41;UBERON:0001890!1.24e-12!41;UBERON:0006240!1.24e-12!41;UBERON:0001869!1.37e-12!32;UBERON:0002346!1.85e-12!90;UBERON:0002020!2.43e-12!34;UBERON:0003528!2.43e-12!34;UBERON:0002791!2.56e-12!33;UBERON:0000956!2.09e-11!25;UBERON:0000203!2.09e-11!25;UBERON:0001950!6.12e-10!20;UBERON:0003056!1.09e-09!61;UBERON:0002619!3.22e-09!22|ontology_enrichment_uberon_v019=UBERON:0001869;8.25e-08;32!UBERON:0000956;1.50e-07;25!UBERON:0000203;1.50e-07;25!UBERON:0002037;7.91e-07;6!UBERON:0001893;8.67e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.49e-24,114;UBERON:0001016,3.10e-12,89;UBERON:0001017,1.41e-11,81;UBERON:0001049,3.56e-08,56;UBERON:0005068,3.56e-08,56;UBERON:0006241,3.56e-08,56;UBERON:0007135,3.56e-08,56;UBERON:0001869,3.83e-08,32;UBERON:0000073,4.90e-08,53;UBERON:0002616,4.90e-08,53;UBERON:0004121,6.70e-08,171;UBERON:0000924,6.70e-08,171;UBERON:0006601,6.70e-08,171;UBERON:0000956,1.72e-07,25;UBERON:0000203,1.72e-07,25;UBERON:0003075,1.74e-07,82;UBERON:0007284,1.74e-07,82;UBERON:0001893,1.89e-07,34;UBERON:0010371,2.93e-07,104;UBERON:0002791,4.66e-07,32;UBERON:0011216,4.96e-07,223;UBERON:0000955,5.46e-07,68;UBERON:0006238,5.46e-07,68;UBERON:0002346,7.98e-07,86|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,1.10808952269109,0,1.56727360739044,9.44578757532487,5.06435372769671,4.89616294419731,1.75750833220288,2.38091709404843,2.44003422072406,0,0.383829398097213,0,0,0.6024118375565,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,7.03984977845291,3.82297027883492,1.77901850772711,4.69403244823158,4.00395987036012,5.17277195959035,3.96626923670917,2.86216126360609,5.12291672198504,8.22132065119314,6.49864487812889,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0,0.795285947051099,0.486634870302636,1.89069634328136,1.33037638477538,1.40535657109002,2.29213382120997,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,2.11900398702904,1.15235184896,0.468642863667593,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.85422955527427,1.27159140695737,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.389748020644795,0,1.19664868234989,0.80823028409406,0.355009592516614,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,0,1.80952150340936,0.0925884451585296,0,0,0,0.811512834825538,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0.567100388969546,1.16426079513703,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,1.10007428731425,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,1.07813787429759,0.77005821767849,15.7538667017927,11.712586847186,4.63973287666617,5.69555302136786,7.65526501983796,0,0,0,0.49076596687656,0,0,1.03985430765404,0.178428988797162,0.315404830067869,0.7028484899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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15573 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6X0 | |||
|association_with_transcript=57bp_to_ENST00000282030,NM_015559,uc010dni.2_5end | |||
|coexpression_cluster_id=C3720 | |||
|description=CAGE_peak_4_at_SETBP1_5end | |||
|id=chr18:42260920..42260951,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.15e-08!14;CL:0000945!9.39e-08!24;CL:0000826!9.39e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.41e-15;13!CL:0000945;2.58e-14;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.04e-16,14;CL:0000945,1.34e-14,24;CL:0000826,1.34e-14,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-35!115;UBERON:0001017!1.26e-20!82;UBERON:0000073!8.39e-20!94;UBERON:0001016!8.39e-20!94;UBERON:0005743!1.22e-19!86;UBERON:0004121!3.19e-18!169;UBERON:0001049!6.37e-18!57;UBERON:0005068!6.37e-18!57;UBERON:0006241!6.37e-18!57;UBERON:0007135!6.37e-18!57;UBERON:0002616!8.72e-18!59;UBERON:0000924!5.61e-17!173;UBERON:0006601!5.61e-17!173;UBERON:0000955!8.74e-17!69;UBERON:0006238!8.74e-17!69;UBERON:0000153!1.04e-15!129;UBERON:0007811!1.04e-15!129;UBERON:0000033!6.12e-15!123;UBERON:0003075!5.17e-14!86;UBERON:0007284!5.17e-14!86;UBERON:0003080!3.90e-13!42;UBERON:0001893!7.26e-13!34;UBERON:0002780!1.24e-12!41;UBERON:0001890!1.24e-12!41;UBERON:0006240!1.24e-12!41;UBERON:0001869!1.37e-12!32;UBERON:0002346!1.85e-12!90;UBERON:0002020!2.43e-12!34;UBERON:0003528!2.43e-12!34;UBERON:0002791!2.56e-12!33;UBERON:0000956!2.09e-11!25;UBERON:0000203!2.09e-11!25;UBERON:0001950!6.12e-10!20;UBERON:0003056!1.09e-09!61;UBERON:0002619!3.22e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.25e-08;32!UBERON:0000956;1.50e-07;25!UBERON:0000203;1.50e-07;25!UBERON:0002037;7.91e-07;6!UBERON:0001893;8.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.49e-24,114;UBERON:0001016,3.10e-12,89;UBERON:0001017,1.41e-11,81;UBERON:0001049,3.56e-08,56;UBERON:0005068,3.56e-08,56;UBERON:0006241,3.56e-08,56;UBERON:0007135,3.56e-08,56;UBERON:0001869,3.83e-08,32;UBERON:0000073,4.90e-08,53;UBERON:0002616,4.90e-08,53;UBERON:0004121,6.70e-08,171;UBERON:0000924,6.70e-08,171;UBERON:0006601,6.70e-08,171;UBERON:0000956,1.72e-07,25;UBERON:0000203,1.72e-07,25;UBERON:0003075,1.74e-07,82;UBERON:0007284,1.74e-07,82;UBERON:0001893,1.89e-07,34;UBERON:0010371,2.93e-07,104;UBERON:0002791,4.66e-07,32;UBERON:0011216,4.96e-07,223;UBERON:0000955,5.46e-07,68;UBERON:0006238,5.46e-07,68;UBERON:0002346,7.98e-07,86 | |||
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| |||
|short_description=p4@SETBP1 | |||
}} |
Revision as of 17:31, 11 September 2013
Short description: | p4@SETBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SETBP1_5end |
Coexpression cluster: | C3720_Neural_duodenum_parietal_dura_Small_Astrocyte_temporal |
Association with transcript: | 57bp_to_ENST00000282030, NM_015559, uc010dni.2_5end |
EntrezGene: | SETBP1 |
HGNC: | 15573 |
UniProt: | Q9Y6X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.04e-16 | 14 |
lymphocyte of B lineage | 1.34e-14 | 24 |
pro-B cell | 1.34e-14 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.49e-24 | 114 |
nervous system | 3.10e-12 | 89 |
central nervous system | 1.41e-11 | 81 |
neural tube | 3.56e-08 | 56 |
neural rod | 3.56e-08 | 56 |
future spinal cord | 3.56e-08 | 56 |
neural keel | 3.56e-08 | 56 |
cerebral hemisphere | 3.83e-08 | 32 |
regional part of nervous system | 4.90e-08 | 53 |
regional part of brain | 4.90e-08 | 53 |
ectoderm-derived structure | 6.70e-08 | 171 |
ectoderm | 6.70e-08 | 171 |
presumptive ectoderm | 6.70e-08 | 171 |
cerebral cortex | 1.72e-07 | 25 |
pallium | 1.72e-07 | 25 |
neural plate | 1.74e-07 | 82 |
presumptive neural plate | 1.74e-07 | 82 |
telencephalon | 1.89e-07 | 34 |
ecto-epithelium | 2.93e-07 | 104 |
regional part of telencephalon | 4.66e-07 | 32 |
organ system subdivision | 4.96e-07 | 223 |
brain | 5.46e-07 | 68 |
future brain | 5.46e-07 | 68 |
neurectoderm | 7.98e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.