FFCP PHASE1:Hg19::chr17:995355..995405,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=81|TSSclassifier=W|UniProt=Q6ZT60|association_with_transcript=-255bp_to_uc002fsh.1_5end|coexpression_cluster_id=C54|description=CAGE_peak_31_at_ABR_5end|id=chr17:995355..995405,-|ontology_enrichment_celltype=CL:0000840!1.99e-08!5;CL:0001029!1.99e-08!5;CL:0002623!6.98e-08!3|ontology_enrichment_celltype_v019=CL:0000840;3.16e-43;5!CL:0002623;2.64e-38;3!CL:0000990;3.84e-29;8!CL:0000451;5.23e-24;10!CL:0000622;1.81e-23;5!CL:0000154;9.49e-20;6!CL:0000150;1.58e-13;9|ontology_enrichment_celltype_v019_2=CL:0000840,3.16e-43,5;CL:0001029,3.16e-43,5;CL:0002623,2.18e-38,3;CL:0000990,3.84e-29,8;CL:0000451,5.23e-24,10;CL:0000622,1.61e-23,5;CL:0000154,8.63e-20,6;CL:0000150,1.49e-13,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001044!4.40e-21!6;UBERON:0003293!4.40e-21!6;UBERON:0003294!4.40e-21!6;UBERON:0010047!4.40e-21!6;UBERON:0000167!4.40e-21!6;UBERON:0003408!2.10e-17!10;UBERON:0000078!1.68e-16!18;UBERON:0000166!5.66e-14!21;UBERON:0000165!9.63e-13!28;UBERON:0000930!9.63e-13!28;UBERON:0001829!4.27e-11!2;UBERON:0001004!2.32e-10!72;UBERON:0001041!2.63e-09!98;UBERON:0007023!2.49e-08!115;UBERON:0000161!7.17e-08!35;UBERON:0000464!2.56e-07!104;UBERON:0000077!3.99e-07!130;UBERON:0001007!5.01e-07!155;UBERON:0001555!5.01e-07!155;UBERON:0007026!5.01e-07!155;UBERON:0002365!5.26e-07!31;UBERON:0002330!5.26e-07!31;UBERON:0004119!5.50e-07!169;UBERON:0000925!5.50e-07!169;UBERON:0006595!5.50e-07!169;UBERON:0001444!8.77e-07!48|ontology_enrichment_uberon_v019=UBERON:0002171;3.16e-29;1!UBERON:0006518;3.16e-29;1!UBERON:0008949;3.16e-29;1!UBERON:0000101;3.16e-29;1!UBERON:0002167;3.16e-29;1!UBERON:0001044;9.49e-20;6!UBERON:0003293;9.49e-20;6!UBERON:0003294;9.49e-20;6!UBERON:0010047;9.49e-20;6!UBERON:0003408;9.49e-20;6!UBERON:0000167;9.49e-20;6!UBERON:0001041;4.75e-09;14!UBERON:0002365;1.03e-08;31!UBERON:0002330;1.03e-08;31!UBERON:0000161;6.57e-07;19!UBERON:0000166;6.57e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.20e-29,1;UBERON:0006518,4.20e-29,1;UBERON:0008949,4.20e-29,1;UBERON:0000101,4.20e-29,1;UBERON:0002167,4.20e-29,1;UBERON:0001044,8.63e-20,6;UBERON:0003293,8.63e-20,6;UBERON:0003294,8.63e-20,6;UBERON:0010047,8.63e-20,6;UBERON:0000167,8.63e-20,6;UBERON:0003408,2.66e-12,10;UBERON:0002365,6.70e-09,31;UBERON:0002330,6.70e-09,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,12.9818957461873,14.2786384585399,8.50930947320737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,1.53646629384555,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.942928742204225,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0|short_description=p31@ABR}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |||
|TSSclassifier=W | |||
|UniProt=Q6ZT60 | |||
|association_with_transcript=-255bp_to_uc002fsh.1_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_31_at_ABR_5end | |||
|id=chr17:995355..995405,- | |||
|ontology_enrichment_celltype=CL:0000840!1.99e-08!5;CL:0001029!1.99e-08!5;CL:0002623!6.98e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.16e-43;5!CL:0002623;2.64e-38;3!CL:0000990;3.84e-29;8!CL:0000451;5.23e-24;10!CL:0000622;1.81e-23;5!CL:0000154;9.49e-20;6!CL:0000150;1.58e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.16e-43,5;CL:0001029,3.16e-43,5;CL:0002623,2.18e-38,3;CL:0000990,3.84e-29,8;CL:0000451,5.23e-24,10;CL:0000622,1.61e-23,5;CL:0000154,8.63e-20,6;CL:0000150,1.49e-13,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!4.40e-21!6;UBERON:0003293!4.40e-21!6;UBERON:0003294!4.40e-21!6;UBERON:0010047!4.40e-21!6;UBERON:0000167!4.40e-21!6;UBERON:0003408!2.10e-17!10;UBERON:0000078!1.68e-16!18;UBERON:0000166!5.66e-14!21;UBERON:0000165!9.63e-13!28;UBERON:0000930!9.63e-13!28;UBERON:0001829!4.27e-11!2;UBERON:0001004!2.32e-10!72;UBERON:0001041!2.63e-09!98;UBERON:0007023!2.49e-08!115;UBERON:0000161!7.17e-08!35;UBERON:0000464!2.56e-07!104;UBERON:0000077!3.99e-07!130;UBERON:0001007!5.01e-07!155;UBERON:0001555!5.01e-07!155;UBERON:0007026!5.01e-07!155;UBERON:0002365!5.26e-07!31;UBERON:0002330!5.26e-07!31;UBERON:0004119!5.50e-07!169;UBERON:0000925!5.50e-07!169;UBERON:0006595!5.50e-07!169;UBERON:0001444!8.77e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.16e-29;1!UBERON:0006518;3.16e-29;1!UBERON:0008949;3.16e-29;1!UBERON:0000101;3.16e-29;1!UBERON:0002167;3.16e-29;1!UBERON:0001044;9.49e-20;6!UBERON:0003293;9.49e-20;6!UBERON:0003294;9.49e-20;6!UBERON:0010047;9.49e-20;6!UBERON:0003408;9.49e-20;6!UBERON:0000167;9.49e-20;6!UBERON:0001041;4.75e-09;14!UBERON:0002365;1.03e-08;31!UBERON:0002330;1.03e-08;31!UBERON:0000161;6.57e-07;19!UBERON:0000166;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.20e-29,1;UBERON:0006518,4.20e-29,1;UBERON:0008949,4.20e-29,1;UBERON:0000101,4.20e-29,1;UBERON:0002167,4.20e-29,1;UBERON:0001044,8.63e-20,6;UBERON:0003293,8.63e-20,6;UBERON:0003294,8.63e-20,6;UBERON:0010047,8.63e-20,6;UBERON:0000167,8.63e-20,6;UBERON:0003408,2.66e-12,10;UBERON:0002365,6.70e-09,31;UBERON:0002330,6.70e-09,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,12.9818957461873,14.2786384585399,8.50930947320737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,1.53646629384555,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.942928742204225,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p31@ABR | |||
}} |
Revision as of 16:48, 11 September 2013
Short description: | p31@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_31_at_ABR_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -255bp_to_uc002fsh.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.16e-43 | 5 |
common dendritic progenitor | 3.16e-43 | 5 |
acinar cell of salivary gland | 2.18e-38 | 3 |
conventional dendritic cell | 3.84e-29 | 8 |
dendritic cell | 5.23e-24 | 10 |
acinar cell | 1.61e-23 | 5 |
protein secreting cell | 8.63e-20 | 6 |
glandular epithelial cell | 1.49e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.20e-29 | 1 |
right lung lobe | 4.20e-29 | 1 |
lower lobe of lung | 4.20e-29 | 1 |
lobe of lung | 4.20e-29 | 1 |
right lung | 4.20e-29 | 1 |
saliva-secreting gland | 8.63e-20 | 6 |
gland of oral region | 8.63e-20 | 6 |
gland of foregut | 8.63e-20 | 6 |
oral gland | 8.63e-20 | 6 |
oral cavity | 8.63e-20 | 6 |
gland of gut | 2.66e-12 | 10 |
exocrine gland | 6.70e-09 | 31 |
exocrine system | 6.70e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.