FFCP PHASE1:Hg19::chr17:9923160..9923189,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4169|TSSclassifier=S|UniProt=O60861|association_with_transcript=15bp_to_AB385324,BT006891,DQ892802,DQ895910_5end|coexpression_cluster_id=C7|description=CAGE_peak_12_at_GAS7_5end|id=chr17:9923160..9923189,-|ontology_enrichment_celltype=CL:0000766!1.39e-42!76;CL:0000557!3.22e-38!71;CL:0002009!7.12e-38!65;CL:0002194!1.84e-36!63;CL:0000576!1.84e-36!63;CL:0000040!1.84e-36!63;CL:0000559!1.84e-36!63;CL:0000839!6.35e-36!70;CL:0002057!8.74e-35!42;CL:0000860!3.41e-31!45;CL:0000763!2.59e-30!112;CL:0000049!2.59e-30!112;CL:0000738!6.19e-23!140;CL:0002031!9.66e-19!124;CL:0002087!3.84e-18!119;CL:0000037!4.48e-18!172;CL:0000566!4.48e-18!172;CL:0002032!7.20e-18!165;CL:0000837!7.20e-18!165;CL:0000988!5.04e-16!182|ontology_enrichment_celltype_v019=CL:0000860;4.76e-68;33!CL:0002057;4.76e-68;33!CL:0000473;1.57e-55;39!CL:0000234;1.57e-55;39!CL:0000576;6.01e-40;48!CL:0000766;2.99e-29;69!CL:0000763;1.67e-16;100!CL:0000094;2.60e-09;8!CL:0002087;5.58e-09;104!CL:0000738;1.80e-08;136!CL:0000775;2.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,1.74e-68,48;CL:0000234,1.74e-68,48;CL:0000860,1.05e-67,42;CL:0002057,1.05e-67,42;CL:0000766,1.74e-66,72;CL:0002009,2.15e-58,61;CL:0002194,7.20e-58,59;CL:0000576,7.20e-58,59;CL:0000040,7.20e-58,59;CL:0000559,7.20e-58,59;CL:0000557,3.44e-57,67;CL:0000839,1.53e-55,66;CL:0000763,8.43e-48,108;CL:0000049,8.43e-48,108;CL:0000738,1.30e-31,136;CL:0002032,3.30e-27,161;CL:0000837,3.30e-27,161;CL:0000037,9.65e-27,168;CL:0002031,2.21e-26,120;CL:0002087,2.22e-25,115;CL:0000988,1.25e-24,177;CL:0000094,1.31e-09,8;CL:0000775,1.57e-07,3;CL:0000081,8.87e-07,11|ontology_enrichment_development_v019=CL:0002057;1.01e-48;42!CL:0000049;3.50e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.79e-31!80;UBERON:0002390!7.33e-31!102;UBERON:0003061!7.33e-31!102;UBERON:0002193!2.43e-28!112;UBERON:0007023!1.66e-27!115;UBERON:0001474!3.75e-27!86;UBERON:0004765!2.13e-22!101;UBERON:0001434!2.13e-22!101;UBERON:0001049!8.08e-22!57;UBERON:0005068!8.08e-22!57;UBERON:0006241!8.08e-22!57;UBERON:0007135!8.08e-22!57;UBERON:0002405!5.37e-20!115;UBERON:0002616!1.12e-18!59;UBERON:0002780!1.86e-18!41;UBERON:0001890!1.86e-18!41;UBERON:0006240!1.86e-18!41;UBERON:0001893!2.90e-18!34;UBERON:0002020!3.00e-18!34;UBERON:0003528!3.00e-18!34;UBERON:0003080!1.03e-17!42;UBERON:0002791!1.34e-17!33;UBERON:0003075!4.00e-17!86;UBERON:0007284!4.00e-17!86;UBERON:0005743!4.36e-17!86;UBERON:0002346!5.57e-17!90;UBERON:0001869!7.75e-17!32;UBERON:0002619!1.17e-16!22;UBERON:0001017!1.63e-16!82;UBERON:0000955!4.01e-16!69;UBERON:0006238!4.01e-16!69;UBERON:0001950!2.04e-15!20;UBERON:0000073!1.02e-13!94;UBERON:0001016!1.02e-13!94;UBERON:0000956!1.03e-13!25;UBERON:0000203!1.03e-13!25;UBERON:0003056!6.59e-13!61;UBERON:0000062!4.99e-11!511;UBERON:0002204!7.03e-09!167;UBERON:0003081!4.26e-08!216|ontology_enrichment_uberon_v019=UBERON:0002619;9.56e-26;22!UBERON:0001950;1.71e-25;20!UBERON:0000956;3.31e-22;25!UBERON:0000203;3.31e-22;25!UBERON:0001869;3.56e-22;32!UBERON:0001893;5.03e-22;34!UBERON:0002791;8.05e-22;32!UBERON:0003528;3.37e-21;34!UBERON:0002020;3.37e-21;34!UBERON:0002780;8.25e-18;41!UBERON:0001890;8.25e-18;41!UBERON:0002021;4.39e-11;5!UBERON:0000073;8.80e-11;53!UBERON:0002616;8.80e-11;53!UBERON:0001872;2.67e-10;5!UBERON:0000200;4.93e-09;6!UBERON:0001017;9.59e-09;75!UBERON:0000955;5.44e-08;68|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.17e-49,76;UBERON:0001474,1.96e-44,82;UBERON:0002390,9.52e-41,98;UBERON:0003061,9.52e-41,98;UBERON:0004765,2.31e-39,90;UBERON:0002405,1.10e-37,93;UBERON:0001434,4.89e-36,100;UBERON:0002193,9.72e-36,108;UBERON:0003528,5.78e-26,34;UBERON:0002020,5.78e-26,34;UBERON:0001893,6.18e-26,34;UBERON:0002619,7.28e-26,22;UBERON:0001950,1.65e-25,20;UBERON:0002791,1.84e-25,32;UBERON:0001869,3.36e-25,32;UBERON:0002780,8.66e-25,41;UBERON:0001890,8.66e-25,41;UBERON:0003080,8.66e-25,41;UBERON:0006240,8.66e-25,41;UBERON:0000956,2.61e-22,25;UBERON:0000203,2.61e-22,25;UBERON:0001049,1.11e-19,56;UBERON:0005068,1.11e-19,56;UBERON:0006241,1.11e-19,56;UBERON:0007135,1.11e-19,56;UBERON:0000073,2.32e-19,53;UBERON:0002616,2.32e-19,53;UBERON:0002204,1.80e-17,167;UBERON:0000955,3.82e-16,68;UBERON:0006238,3.82e-16,68;UBERON:0001017,8.09e-15,81;UBERON:0003056,1.32e-14,61;UBERON:0003081,8.75e-14,203;UBERON:0001016,1.30e-12,89;UBERON:0003075,2.63e-11,82;UBERON:0007284,2.63e-11,82;UBERON:0002021,4.37e-11,5;UBERON:0002346,1.76e-10,86;UBERON:0001872,2.15e-10,5;UBERON:0000200,6.13e-09,6;UBERON:0000923,1.10e-08,560;UBERON:0010316,1.10e-08,560;UBERON:0005291,1.10e-08,560;UBERON:0006598,1.10e-08,560;UBERON:0010317,1.10e-08,560;UBERON:0002532,1.10e-08,560;UBERON:0002050,1.74e-08,564;UBERON:0010371,2.30e-08,104;UBERON:0007023,5.09e-08,114;UBERON:0005423,1.13e-07,581;UBERON:0000922,3.55e-07,592|phase1_expression=0.363356758541113,0,0.56381761638388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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |||
|TSSclassifier=S | |||
|UniProt=O60861 | |||
|association_with_transcript=15bp_to_AB385324,BT006891,DQ892802,DQ895910_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_12_at_GAS7_5end | |||
|id=chr17:9923160..9923189,- | |||
|ontology_enrichment_celltype=CL:0000766!1.39e-42!76;CL:0000557!3.22e-38!71;CL:0002009!7.12e-38!65;CL:0002194!1.84e-36!63;CL:0000576!1.84e-36!63;CL:0000040!1.84e-36!63;CL:0000559!1.84e-36!63;CL:0000839!6.35e-36!70;CL:0002057!8.74e-35!42;CL:0000860!3.41e-31!45;CL:0000763!2.59e-30!112;CL:0000049!2.59e-30!112;CL:0000738!6.19e-23!140;CL:0002031!9.66e-19!124;CL:0002087!3.84e-18!119;CL:0000037!4.48e-18!172;CL:0000566!4.48e-18!172;CL:0002032!7.20e-18!165;CL:0000837!7.20e-18!165;CL:0000988!5.04e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-68;33!CL:0002057;4.76e-68;33!CL:0000473;1.57e-55;39!CL:0000234;1.57e-55;39!CL:0000576;6.01e-40;48!CL:0000766;2.99e-29;69!CL:0000763;1.67e-16;100!CL:0000094;2.60e-09;8!CL:0002087;5.58e-09;104!CL:0000738;1.80e-08;136!CL:0000775;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.74e-68,48;CL:0000234,1.74e-68,48;CL:0000860,1.05e-67,42;CL:0002057,1.05e-67,42;CL:0000766,1.74e-66,72;CL:0002009,2.15e-58,61;CL:0002194,7.20e-58,59;CL:0000576,7.20e-58,59;CL:0000040,7.20e-58,59;CL:0000559,7.20e-58,59;CL:0000557,3.44e-57,67;CL:0000839,1.53e-55,66;CL:0000763,8.43e-48,108;CL:0000049,8.43e-48,108;CL:0000738,1.30e-31,136;CL:0002032,3.30e-27,161;CL:0000837,3.30e-27,161;CL:0000037,9.65e-27,168;CL:0002031,2.21e-26,120;CL:0002087,2.22e-25,115;CL:0000988,1.25e-24,177;CL:0000094,1.31e-09,8;CL:0000775,1.57e-07,3;CL:0000081,8.87e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-48;42!CL:0000049;3.50e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.79e-31!80;UBERON:0002390!7.33e-31!102;UBERON:0003061!7.33e-31!102;UBERON:0002193!2.43e-28!112;UBERON:0007023!1.66e-27!115;UBERON:0001474!3.75e-27!86;UBERON:0004765!2.13e-22!101;UBERON:0001434!2.13e-22!101;UBERON:0001049!8.08e-22!57;UBERON:0005068!8.08e-22!57;UBERON:0006241!8.08e-22!57;UBERON:0007135!8.08e-22!57;UBERON:0002405!5.37e-20!115;UBERON:0002616!1.12e-18!59;UBERON:0002780!1.86e-18!41;UBERON:0001890!1.86e-18!41;UBERON:0006240!1.86e-18!41;UBERON:0001893!2.90e-18!34;UBERON:0002020!3.00e-18!34;UBERON:0003528!3.00e-18!34;UBERON:0003080!1.03e-17!42;UBERON:0002791!1.34e-17!33;UBERON:0003075!4.00e-17!86;UBERON:0007284!4.00e-17!86;UBERON:0005743!4.36e-17!86;UBERON:0002346!5.57e-17!90;UBERON:0001869!7.75e-17!32;UBERON:0002619!1.17e-16!22;UBERON:0001017!1.63e-16!82;UBERON:0000955!4.01e-16!69;UBERON:0006238!4.01e-16!69;UBERON:0001950!2.04e-15!20;UBERON:0000073!1.02e-13!94;UBERON:0001016!1.02e-13!94;UBERON:0000956!1.03e-13!25;UBERON:0000203!1.03e-13!25;UBERON:0003056!6.59e-13!61;UBERON:0000062!4.99e-11!511;UBERON:0002204!7.03e-09!167;UBERON:0003081!4.26e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.56e-26;22!UBERON:0001950;1.71e-25;20!UBERON:0000956;3.31e-22;25!UBERON:0000203;3.31e-22;25!UBERON:0001869;3.56e-22;32!UBERON:0001893;5.03e-22;34!UBERON:0002791;8.05e-22;32!UBERON:0003528;3.37e-21;34!UBERON:0002020;3.37e-21;34!UBERON:0002780;8.25e-18;41!UBERON:0001890;8.25e-18;41!UBERON:0002021;4.39e-11;5!UBERON:0000073;8.80e-11;53!UBERON:0002616;8.80e-11;53!UBERON:0001872;2.67e-10;5!UBERON:0000200;4.93e-09;6!UBERON:0001017;9.59e-09;75!UBERON:0000955;5.44e-08;68 | |||
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| |||
|short_description=p12@GAS7 | |||
}} |
Revision as of 16:47, 11 September 2013
Short description: | p12@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_GAS7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 15bp_to_AB385324, BT006891, DQ892802, DQ895910_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | O60861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.74e-68 | 48 |
phagocyte | 1.74e-68 | 48 |
classical monocyte | 1.05e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-67 | 42 |
myeloid leukocyte | 1.74e-66 | 72 |
macrophage dendritic cell progenitor | 2.15e-58 | 61 |
monopoietic cell | 7.20e-58 | 59 |
monocyte | 7.20e-58 | 59 |
monoblast | 7.20e-58 | 59 |
promonocyte | 7.20e-58 | 59 |
granulocyte monocyte progenitor cell | 3.44e-57 | 67 |
myeloid lineage restricted progenitor cell | 1.53e-55 | 66 |
myeloid cell | 8.43e-48 | 108 |
common myeloid progenitor | 8.43e-48 | 108 |
leukocyte | 1.30e-31 | 136 |
hematopoietic oligopotent progenitor cell | 3.30e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.30e-27 | 161 |
hematopoietic stem cell | 9.65e-27 | 168 |
hematopoietic lineage restricted progenitor cell | 2.21e-26 | 120 |
nongranular leukocyte | 2.22e-25 | 115 |
hematopoietic cell | 1.25e-24 | 177 |
granulocyte | 1.31e-09 | 8 |
neutrophil | 1.57e-07 | 3 |
blood cell | 8.87e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.