FFCP PHASE1:Hg19::chr17:79056750..79056795,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr17:79056750..79056795,+|id=chr17:79056750..79056795,+|ontology_enrichment_celltype=CL:0002368!2.41e-17!13;CL:0002586!2.36e-10!3;CL:0002328!7.03e-10!3;CL:0000223!3.12e-09!59;CL:0002202!3.35e-08!9;CL:0002632!3.35e-08!9;CL:0000149!7.57e-08!4;CL:0002327!9.93e-08!4;CL:0002076!1.93e-07!43|ontology_enrichment_celltype_v019=CL:0000650;6.67e-09;2!CL:1000500;6.67e-09;2!CL:1000618;6.67e-09;2!CL:1001318;6.67e-09;2!CL:0002173;6.67e-09;2!CL:1000507;5.42e-07;10!CL:1000494;5.42e-07;10|ontology_enrichment_celltype_v019_2=CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2;CL:1000507,5.59e-07,10;CL:1000494,5.59e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001781!2.36e-10!3;UBERON:0001782!2.36e-10!3;UBERON:0005424!2.36e-10!3;UBERON:0002365!6.58e-10!31;UBERON:0002330!6.58e-10!31;UBERON:0004815!7.03e-10!3;UBERON:0002031!7.03e-10!3;UBERON:0007196!1.01e-09!14;UBERON:0001558!1.01e-09!14;UBERON:0004119!1.25e-09!169;UBERON:0000925!1.25e-09!169;UBERON:0006595!1.25e-09!169;UBERON:0005911!2.21e-09!82;UBERON:0002530!4.18e-09!59;UBERON:0000065!4.80e-09!53;UBERON:0001004!6.09e-09!72;UBERON:0005177!4.52e-08!107;UBERON:0005157!5.80e-08!51;UBERON:0001911!9.93e-08!4;UBERON:0005333!9.93e-08!4;UBERON:0008425!9.93e-08!4;UBERON:0005311!9.93e-08!4;UBERON:0001048!1.25e-07!168;UBERON:0002185!1.70e-07!4;UBERON:0005153!2.20e-07!37;UBERON:0003127!3.39e-07!2;UBERON:0005085!5.80e-07!29|ontology_enrichment_uberon_v019=UBERON:0003127;6.67e-09;2!UBERON:0003567;6.67e-09;2!UBERON:0003838;6.67e-09;2!UBERON:0003586;6.67e-09;2!UBERON:0005169;6.67e-09;2!UBERON:0002321;6.67e-09;2!UBERON:0005215;6.67e-09;2!UBERON:0002303;6.67e-09;2!UBERON:0002319;6.67e-09;2!UBERON:0002365;3.15e-08;31!UBERON:0002330;3.15e-08;31!UBERON:0002107;5.35e-08;19!UBERON:0006925;5.35e-08;19!UBERON:0005172;4.14e-07;52!UBERON:0005173;4.14e-07;52!UBERON:0004211;5.42e-07;10!UBERON:0009773;5.42e-07;10!UBERON:0001231;5.42e-07;10!UBERON:0004810;5.42e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.39e-09,101;UBERON:0003127,8.09e-09,2;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0002365,2.70e-08,31;UBERON:0002330,2.70e-08,31;UBERON:0002107,5.22e-08,19;UBERON:0006925,5.22e-08,19;UBERON:0008836,5.22e-08,19;UBERON:0005172,3.82e-07,54;UBERON:0005173,3.82e-07,54;UBERON:0008835,5.51e-07,22;UBERON:0003894,5.51e-07,22;UBERON:0004810,5.59e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,5.31710916013264,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.447792613514241,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.769350375349168,0.984043937099117,1.30151357865721,1.23649213977267,0.0915694648183434,0.577566499444116,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,1.12972560932135,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4741639175822,0,0,0,0,0,0.32036223770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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:79056750..79056795,+ | |||
|id=chr17:79056750..79056795,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.41e-17!13;CL:0002586!2.36e-10!3;CL:0002328!7.03e-10!3;CL:0000223!3.12e-09!59;CL:0002202!3.35e-08!9;CL:0002632!3.35e-08!9;CL:0000149!7.57e-08!4;CL:0002327!9.93e-08!4;CL:0002076!1.93e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000650;6.67e-09;2!CL:1000500;6.67e-09;2!CL:1000618;6.67e-09;2!CL:1001318;6.67e-09;2!CL:0002173;6.67e-09;2!CL:1000507;5.42e-07;10!CL:1000494;5.42e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2;CL:1000507,5.59e-07,10;CL:1000494,5.59e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!2.36e-10!3;UBERON:0001782!2.36e-10!3;UBERON:0005424!2.36e-10!3;UBERON:0002365!6.58e-10!31;UBERON:0002330!6.58e-10!31;UBERON:0004815!7.03e-10!3;UBERON:0002031!7.03e-10!3;UBERON:0007196!1.01e-09!14;UBERON:0001558!1.01e-09!14;UBERON:0004119!1.25e-09!169;UBERON:0000925!1.25e-09!169;UBERON:0006595!1.25e-09!169;UBERON:0005911!2.21e-09!82;UBERON:0002530!4.18e-09!59;UBERON:0000065!4.80e-09!53;UBERON:0001004!6.09e-09!72;UBERON:0005177!4.52e-08!107;UBERON:0005157!5.80e-08!51;UBERON:0001911!9.93e-08!4;UBERON:0005333!9.93e-08!4;UBERON:0008425!9.93e-08!4;UBERON:0005311!9.93e-08!4;UBERON:0001048!1.25e-07!168;UBERON:0002185!1.70e-07!4;UBERON:0005153!2.20e-07!37;UBERON:0003127!3.39e-07!2;UBERON:0005085!5.80e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.67e-09;2!UBERON:0003567;6.67e-09;2!UBERON:0003838;6.67e-09;2!UBERON:0003586;6.67e-09;2!UBERON:0005169;6.67e-09;2!UBERON:0002321;6.67e-09;2!UBERON:0005215;6.67e-09;2!UBERON:0002303;6.67e-09;2!UBERON:0002319;6.67e-09;2!UBERON:0002365;3.15e-08;31!UBERON:0002330;3.15e-08;31!UBERON:0002107;5.35e-08;19!UBERON:0006925;5.35e-08;19!UBERON:0005172;4.14e-07;52!UBERON:0005173;4.14e-07;52!UBERON:0004211;5.42e-07;10!UBERON:0009773;5.42e-07;10!UBERON:0001231;5.42e-07;10!UBERON:0004810;5.42e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.39e-09,101;UBERON:0003127,8.09e-09,2;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0002365,2.70e-08,31;UBERON:0002330,2.70e-08,31;UBERON:0002107,5.22e-08,19;UBERON:0006925,5.22e-08,19;UBERON:0008836,5.22e-08,19;UBERON:0005172,3.82e-07,54;UBERON:0005173,3.82e-07,54;UBERON:0008835,5.51e-07,22;UBERON:0003894,5.51e-07,22;UBERON:0004810,5.59e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,5.31710916013264,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.447792613514241,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.769350375349168,0.984043937099117,1.30151357865721,1.23649213977267,0.0915694648183434,0.577566499444116,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,1.12972560932135,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4741639175822,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,2.34454203369928,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.26940821205835,1.00411087549747,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:79056750..79056795,+ | |||
}} |
Revision as of 16:22, 11 September 2013
Short description: | p@chr17:79056750..79056795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79056750..79056795, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
kidney tubule cell | 5.59e-07 | 10 |
nephron tubule epithelial cell | 5.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.39e-09 | 101 |
open tracheal system trachea | 8.09e-09 | 2 |
abdomen connective tissue | 8.74e-09 | 2 |
abdominal segment connective tissue | 8.74e-09 | 2 |
trunk connective tissue | 8.74e-09 | 2 |
interstitial tissue | 8.74e-09 | 2 |
extraglomerular mesangium | 8.74e-09 | 2 |
kidney interstitium | 8.74e-09 | 2 |
juxtaglomerular apparatus | 8.74e-09 | 2 |
mesangium | 8.74e-09 | 2 |
exocrine gland | 2.70e-08 | 31 |
exocrine system | 2.70e-08 | 31 |
liver | 5.22e-08 | 19 |
digestive gland | 5.22e-08 | 19 |
liver bud | 5.22e-08 | 19 |
abdomen element | 3.82e-07 | 54 |
abdominal segment element | 3.82e-07 | 54 |
hepatic diverticulum | 5.51e-07 | 22 |
liver primordium | 5.51e-07 | 22 |
nephron tubule epithelium | 5.59e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.