FFCP PHASE1:Hg19::chr17:74722836..74722850,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23210|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19355|TSSclassifier=S|UniProt=B2WTI3,Q6NYC1,B2WTI4|association_with_transcript=15bp_to_ENST00000303996,ENST00000542934_5end|coexpression_cluster_id=C2|description=CAGE_peak_6_at_JMJD6_5end|id=chr17:74722836..74722850,-|ontology_enrichment_celltype=CL:0000738!4.62e-29!140;CL:0000037!1.20e-22!172;CL:0000566!1.20e-22!172;CL:0002031!6.33e-22!124;CL:0000988!3.25e-21!182;CL:0002032!3.32e-20!165;CL:0000837!3.32e-20!165;CL:0002087!1.45e-19!119;CL:0002057!5.35e-18!42;CL:0000766!1.14e-16!76;CL:0000860!3.90e-16!45;CL:0000839!1.09e-12!70;CL:0000557!2.12e-12!71;CL:0000763!1.10e-11!112;CL:0000049!1.10e-11!112;CL:0002009!7.69e-11!65;CL:0002194!6.39e-10!63;CL:0000576!6.39e-10!63;CL:0000040!6.39e-10!63;CL:0000559!6.39e-10!63;CL:0000542!9.67e-09!53;CL:0000051!9.67e-09!53;CL:0000838!1.26e-08!52;CL:0000094!6.53e-08!8|ontology_enrichment_celltype_v019=CL:0000094;2.09e-22;8!CL:0000081;7.93e-16;11!CL:0000860;2.86e-15;33!CL:0002057;2.86e-15;33!CL:0000766;1.14e-11;69!CL:0000473;1.86e-11;39!CL:0000234;1.86e-11;39!CL:0000624;8.66e-11;6!CL:0000576;2.02e-10;48!CL:0000791;2.25e-10;18!CL:0000789;2.25e-10;18!CL:0002419;2.25e-10;18!CL:0000775;1.34e-09;3!CL:0000623;1.89e-09;3!CL:0000767;3.38e-09;3!CL:0002087;2.69e-08;104!CL:0000738;2.97e-08;136!CL:0000763;4.11e-07;100!CL:0000771;5.22e-07;2!CL:0000084;5.75e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,6.20e-39,136;CL:0000037,1.17e-31,168;CL:0000988,2.46e-29,177;CL:0002032,1.01e-27,161;CL:0000837,1.01e-27,161;CL:0000766,5.11e-26,72;CL:0002031,5.98e-25,120;CL:0000094,1.89e-22,8;CL:0002087,1.17e-20,115;CL:0000763,1.81e-19,108;CL:0000049,1.81e-19,108;CL:0000860,1.87e-18,42;CL:0002057,1.87e-18,42;CL:0000557,2.63e-16,67;CL:0000081,7.38e-16,11;CL:0000473,1.73e-15,48;CL:0000234,1.73e-15,48;CL:0000839,4.05e-15,66;CL:0002009,1.75e-13,61;CL:0002194,2.26e-11,59;CL:0000576,2.26e-11,59;CL:0000040,2.26e-11,59;CL:0000559,2.26e-11,59;CL:0000624,6.12e-11,6;CL:0000791,1.57e-10,18;CL:0000789,1.57e-10,18;CL:0002420,1.57e-10,18;CL:0002419,1.57e-10,18;CL:0000790,1.57e-10,18;CL:0000134,2.02e-10,354;CL:0002320,5.93e-10,361;CL:0000775,1.31e-09,3;CL:0000623,1.93e-09,3;CL:0000825,1.93e-09,3;CL:0000767,2.98e-09,3;CL:0000034,8.20e-09,441;CL:0000219,2.56e-08,386;CL:0000838,3.62e-08,52;CL:0000723,4.20e-08,433;CL:0000542,6.03e-08,53;CL:0000051,6.03e-08,53;CL:0000048,7.55e-08,427;CL:0000084,4.51e-07,25;CL:0000827,4.51e-07,25;CL:0000771,5.47e-07,2|ontology_enrichment_development_v019=CL:0002057;1.22e-13;42!CL:0000790;2.25e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.67e-15!102;UBERON:0003061!3.67e-15!102;UBERON:0002193!4.37e-15!112;UBERON:0001474!8.96e-13!86;UBERON:0002371!4.53e-12!80;UBERON:0002405!1.30e-09!115;UBERON:0004765!8.25e-09!101;UBERON:0001434!8.25e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.49e-17,98;UBERON:0003061,3.49e-17,98;UBERON:0002193,5.93e-16,108;UBERON:0002371,4.70e-15,76;UBERON:0001474,1.78e-13,82;UBERON:0002405,3.83e-12,93;UBERON:0004765,1.05e-11,90;UBERON:0001434,6.59e-10,100;UBERON:0002384,2.57e-09,371;UBERON:0003081,2.45e-08,203|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0.273748850145768,0.251085279189606,0.152826811495903,0.164201178899891,0.236132343941038,9.8341069212226,4.60595277716655,2.63187409637329,0,0,0.369754010166788,0,0.142169232487422,0.587200878669695,2.21598163412751,3.00816671205213,2.60413044859022,0.671746422719773,0,0,0.581592955118259,0.377875943688809,1.4555043671269,1.62700325833979,0.411167888021826,0.929119112685311,1.43846196161075,0.256160706529101,0.945928919554341,2.06847408441971,0.645484683583826,0,2.07066573496865,0.818718450173537,0.674170453335254,1.83650335422542,0.962787081228281,1.27867425159808,1.31940520074686,0.598390972864896,2.13112375266347,3.19230162491442,1.13477044938228,2.4912889959823,1.00499466102697,1.5644487552606,1.52032191293582,1.21079900526674,0,1.26584954976354,0,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.32145117339416,0.285012743741249,0.59675003159727,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0.954053754535364,3.98449078376614,3.52342313622563,2.6759125968766,1.32171328579026,2.24203425192614,0,3.14735632182133,4.32311839024081,2.67281948699362,0,1.30368906653436,0,0,0.222820913770347,1.76763544484902,0.443067789167242,1.35401931882508,0.384273959177026,0.780356085359269,0.164437904603676,0,0,0.593146252648242,0.267540828089713,1.04535523804977,0.113309342697566,0.766440987203842,1.37450978193052,1.26509846009751,0,0.651083453856419,0,0.752875595388864,0,0,0.236777252044017,1.64225599384209,4.23374160771938,5.34880391567015,4.48955652036677,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.39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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19355 | |||
|TSSclassifier=S | |||
|UniProt=B2WTI3,Q6NYC1,B2WTI4 | |||
|association_with_transcript=15bp_to_ENST00000303996,ENST00000542934_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_JMJD6_5end | |||
|id=chr17:74722836..74722850,- | |||
|ontology_enrichment_celltype=CL:0000738!4.62e-29!140;CL:0000037!1.20e-22!172;CL:0000566!1.20e-22!172;CL:0002031!6.33e-22!124;CL:0000988!3.25e-21!182;CL:0002032!3.32e-20!165;CL:0000837!3.32e-20!165;CL:0002087!1.45e-19!119;CL:0002057!5.35e-18!42;CL:0000766!1.14e-16!76;CL:0000860!3.90e-16!45;CL:0000839!1.09e-12!70;CL:0000557!2.12e-12!71;CL:0000763!1.10e-11!112;CL:0000049!1.10e-11!112;CL:0002009!7.69e-11!65;CL:0002194!6.39e-10!63;CL:0000576!6.39e-10!63;CL:0000040!6.39e-10!63;CL:0000559!6.39e-10!63;CL:0000542!9.67e-09!53;CL:0000051!9.67e-09!53;CL:0000838!1.26e-08!52;CL:0000094!6.53e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.09e-22;8!CL:0000081;7.93e-16;11!CL:0000860;2.86e-15;33!CL:0002057;2.86e-15;33!CL:0000766;1.14e-11;69!CL:0000473;1.86e-11;39!CL:0000234;1.86e-11;39!CL:0000624;8.66e-11;6!CL:0000576;2.02e-10;48!CL:0000791;2.25e-10;18!CL:0000789;2.25e-10;18!CL:0002419;2.25e-10;18!CL:0000775;1.34e-09;3!CL:0000623;1.89e-09;3!CL:0000767;3.38e-09;3!CL:0002087;2.69e-08;104!CL:0000738;2.97e-08;136!CL:0000763;4.11e-07;100!CL:0000771;5.22e-07;2!CL:0000084;5.75e-07;25 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.22e-13;42!CL:0000790;2.25e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-15!102;UBERON:0003061!3.67e-15!102;UBERON:0002193!4.37e-15!112;UBERON:0001474!8.96e-13!86;UBERON:0002371!4.53e-12!80;UBERON:0002405!1.30e-09!115;UBERON:0004765!8.25e-09!101;UBERON:0001434!8.25e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p6@JMJD6 | |||
}} |
Revision as of 15:51, 11 September 2013
Short description: | p6@JMJD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_JMJD6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 15bp_to_ENST00000303996, ENST00000542934_5end |
EntrezGene: | JMJD6 |
HGNC: | 19355 |
UniProt: | B2WTI3Q6NYC1B2WTI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.49e-17 | 98 |
blood island | 3.49e-17 | 98 |
hemolymphoid system | 5.93e-16 | 108 |
bone marrow | 4.70e-15 | 76 |
bone element | 1.78e-13 | 82 |
immune system | 3.83e-12 | 93 |
skeletal element | 1.05e-11 | 90 |
skeletal system | 6.59e-10 | 100 |
connective tissue | 2.57e-09 | 371 |
lateral plate mesoderm | 2.45e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.