FFCP PHASE1:Hg19::chr17:67323232..67323299,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35 | |||
|TSSclassifier=S | |||
|UniProt=E7ETD3,Q8WWZ7 | |||
|association_with_transcript=23bp_to_ENST00000392677,NM_172232,uc002jig.2,uc002jih.2,uc010dfe.2_5end | |||
|description=CAGE_peak_1_at_ABCA5_5end | |||
|id=chr17:67323232..67323299,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.78e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.08e-45!115;UBERON:0001049!6.56e-20!57;UBERON:0005068!6.56e-20!57;UBERON:0006241!6.56e-20!57;UBERON:0007135!6.56e-20!57;UBERON:0002616!5.93e-18!59;UBERON:0003080!2.16e-16!42;UBERON:0002780!5.34e-16!41;UBERON:0001890!5.34e-16!41;UBERON:0006240!5.34e-16!41;UBERON:0000955!2.55e-15!69;UBERON:0006238!2.55e-15!69;UBERON:0002346!3.80e-14!90;UBERON:0003075!7.79e-13!86;UBERON:0007284!7.79e-13!86;UBERON:0002020!8.53e-13!34;UBERON:0003528!8.53e-13!34;UBERON:0001893!1.17e-12!34;UBERON:0001869!3.83e-12!32;UBERON:0002791!4.15e-12!33;UBERON:0001017!4.95e-12!82;UBERON:0002619!1.17e-11!22;UBERON:0005743!2.35e-11!86;UBERON:0001950!6.56e-11!20;UBERON:0000073!3.94e-10!94;UBERON:0001016!3.94e-10!94;UBERON:0000153!8.86e-10!129;UBERON:0007811!8.86e-10!129;UBERON:0003056!1.15e-09!61;UBERON:0000956!3.68e-09!25;UBERON:0000203!3.68e-09!25;UBERON:0000033!4.47e-09!123;UBERON:0000924!1.97e-07!173;UBERON:0006601!1.97e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.68e-12;114!UBERON:0002619;1.09e-11;22!UBERON:0002780;1.45e-11;41!UBERON:0001890;1.45e-11;41!UBERON:0003528;5.91e-11;34!UBERON:0002020;5.91e-11;34!UBERON:0001950;6.00e-11;20!UBERON:0001893;6.77e-11;34!UBERON:0001869;7.58e-11;32!UBERON:0000073;1.07e-10;53!UBERON:0002616;1.07e-10;53!UBERON:0002791;1.43e-10;32!UBERON:0000956;4.38e-09;25!UBERON:0000203;4.38e-09;25!UBERON:0000955;1.06e-07;68!UBERON:0001017;2.73e-07;75 | |||
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| |||
|short_description=p1@ABCA5 | |||
}} |
Revision as of 15:16, 11 September 2013
Short description: | p1@ABCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ABCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000392677, NM_172232, uc002jig.2, uc002jih.2, uc010dfe.2_5end |
EntrezGene: | ABCA5 |
HGNC: | 35 |
UniProt: | E7ETD3Q8WWZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.04e-44 | 114 |
neural tube | 1.71e-19 | 56 |
neural rod | 1.71e-19 | 56 |
future spinal cord | 1.71e-19 | 56 |
neural keel | 1.71e-19 | 56 |
regional part of nervous system | 2.86e-18 | 53 |
regional part of brain | 2.86e-18 | 53 |
regional part of forebrain | 4.96e-16 | 41 |
forebrain | 4.96e-16 | 41 |
anterior neural tube | 4.96e-16 | 41 |
future forebrain | 4.96e-16 | 41 |
brain | 4.78e-15 | 68 |
future brain | 4.78e-15 | 68 |
neurectoderm | 8.64e-14 | 86 |
brain grey matter | 8.04e-13 | 34 |
gray matter | 8.04e-13 | 34 |
telencephalon | 1.11e-12 | 34 |
neural plate | 1.78e-12 | 82 |
presumptive neural plate | 1.78e-12 | 82 |
organ system subdivision | 1.95e-12 | 223 |
cerebral hemisphere | 3.62e-12 | 32 |
regional part of telencephalon | 7.40e-12 | 32 |
central nervous system | 9.82e-12 | 81 |
regional part of cerebral cortex | 1.11e-11 | 22 |
ecto-epithelium | 5.08e-11 | 104 |
neocortex | 6.25e-11 | 20 |
nervous system | 1.85e-10 | 89 |
pre-chordal neural plate | 1.43e-09 | 61 |
cerebral cortex | 3.54e-09 | 25 |
pallium | 3.54e-09 | 25 |
ectoderm-derived structure | 2.99e-07 | 171 |
ectoderm | 2.99e-07 | 171 |
presumptive ectoderm | 2.99e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.