FFCP PHASE1:Hg19::chr17:66951474..66951550,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38 | |||
|TSSclassifier=S | |||
|UniProt=O94911,Q49AI9 | |||
|association_with_transcript=0bp_to_ENST00000269080,ENST00000428549,ENST00000542396,NM_007168,uc002jhp.2,uc002jhq.2,uc002jhr.2,uc002jhs.2,uc002jht.2,uc010wqq.1,uc010wqr.1_5end | |||
|coexpression_cluster_id=C2431 | |||
|description=CAGE_peak_1_at_ABCA8_5end | |||
|id=chr17:66951474..66951550,- | |||
|ontology_enrichment_celltype=CL:0000680!1.84e-10!57;CL:0000056!1.84e-10!57;CL:0000355!1.84e-10!57;CL:0000187!8.46e-10!54;CL:0000055!8.94e-09!180;CL:0000183!2.93e-08!59;CL:0000192!7.85e-08!42;CL:0000514!7.85e-08!42;CL:0000393!8.35e-08!60;CL:0000211!8.35e-08!60;CL:0000359!3.83e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.29e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.17e-11,58;CL:0000056,3.17e-11,58;CL:0000355,3.17e-11,58;CL:0000187,1.65e-10,55;CL:0000192,2.20e-08,43;CL:0000514,2.20e-08,43;CL:0000393,5.45e-08,61;CL:0000211,5.45e-08,61;CL:0000359,3.31e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.59e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@ABCA8 | |||
}} |
Revision as of 15:16, 11 September 2013
Short description: | p1@ABCA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ABCA8_5end |
Coexpression cluster: | C2431_heart_thalamus_substantia_spinal_corpus_globus_ovary |
Association with transcript: | 0bp_to_ENST00000269080, ENST00000428549, ENST00000542396, NM_007168, uc002jhp.2, uc002jhq.2, uc002jhr.2, uc002jhs.2, uc002jht.2, uc010wqq.1, uc010wqr.1_5end |
EntrezGene: | ABCA8 |
HGNC: | 38 |
UniProt: | O94911Q49AI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.17e-11 | 58 |
myoblast | 3.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-11 | 58 |
muscle cell | 1.65e-10 | 55 |
smooth muscle cell | 2.20e-08 | 43 |
smooth muscle myoblast | 2.20e-08 | 43 |
electrically responsive cell | 5.45e-08 | 61 |
electrically active cell | 5.45e-08 | 61 |
vascular associated smooth muscle cell | 3.31e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.