FFCP PHASE1:Hg19::chr17:57839268..57839277,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:57839268..57839277,+|id=chr17:57839268..57839277,+|ontology_enrichment_celltype=CL:0000243!7.66e-09!15;CL:0000125!7.66e-09!15;CL:0000030!7.66e-09!15;CL:0000339!7.66e-09!15;CL:0000128!9.85e-09!7;CL:0000126!9.85e-09!7;CL:0000127!9.85e-09!7;CL:0002453!9.85e-09!7;CL:0000055!7.44e-08!180;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0002319!4.87e-07!25|ontology_enrichment_celltype_v019=CL:0000511;5.37e-13;1!CL:0002625;5.37e-13;1!CL:0000216;5.37e-13;1!CL:0000062;2.18e-12;9!CL:0000243;5.97e-07;15!CL:0000125;5.97e-07;15|ontology_enrichment_celltype_v019_2=CL:0000511,3.33e-13,1;CL:0002625,3.33e-13,1;CL:0000216,3.33e-13,1;CL:0000062,3.67e-10,11;CL:0000375,3.67e-10,11;CL:0000335,3.67e-10,11;CL:0000243,6.16e-07,15;CL:0000125,6.16e-07,15;CL:0000030,6.16e-07,15;CL:0000339,6.16e-07,15|ontology_enrichment_development_v019=CL:0000335;3.08e-10;11!CL:0000339;5.97e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;3.92e-07;2|ontology_enrichment_disease_v019_2=DOID:3910,4.98e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;5.37e-13;1!UBERON:0001343;5.37e-13;1!UBERON:0004910;5.37e-13;1!UBERON:0004813;5.37e-13;1!UBERON:0004903;3.92e-07;2!UBERON:0004909;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.33e-13,1;UBERON:0001343,3.33e-13,1;UBERON:0004910,3.33e-13,1;UBERON:0005154,3.33e-13,1;UBERON:0005295,3.33e-13,1;UBERON:0004813,3.33e-13,1;UBERON:0005297,3.33e-13,1;UBERON:0005294,3.33e-13,1;UBERON:0010141,3.33e-13,1;UBERON:0005891,3.33e-13,1;UBERON:0004909,3.09e-07,2;UBERON:0004903,4.98e-07,2;UBERON:0002173,4.98e-07,2;UBERON:0002186,4.98e-07,2|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0,0.61560529038394,0.408001382488506,0.313454721478088,2.0036519099174,0.410623275218653,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,1.79327847615945,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.661743720148475,0.443458794925128,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0,0.309157587715317,0,0,0,0.389748020644795,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0.200506470303285,0,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,1.37354197227515,2.80532299729999,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,0,0,0,0.608731130888112,0.6196469961995,1.12678241012897,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.222886768554957,1.13654458722565,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.293977192243133,0.08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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:57839268..57839277,+ | |||
|id=chr17:57839268..57839277,+ | |||
|ontology_enrichment_celltype=CL:0000243!7.66e-09!15;CL:0000125!7.66e-09!15;CL:0000030!7.66e-09!15;CL:0000339!7.66e-09!15;CL:0000128!9.85e-09!7;CL:0000126!9.85e-09!7;CL:0000127!9.85e-09!7;CL:0002453!9.85e-09!7;CL:0000055!7.44e-08!180;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0002319!4.87e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.37e-13;1!CL:0002625;5.37e-13;1!CL:0000216;5.37e-13;1!CL:0000062;2.18e-12;9!CL:0000243;5.97e-07;15!CL:0000125;5.97e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.33e-13,1;CL:0002625,3.33e-13,1;CL:0000216,3.33e-13,1;CL:0000062,3.67e-10,11;CL:0000375,3.67e-10,11;CL:0000335,3.67e-10,11;CL:0000243,6.16e-07,15;CL:0000125,6.16e-07,15;CL:0000030,6.16e-07,15;CL:0000339,6.16e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000335;3.08e-10;11!CL:0000339;5.97e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.98e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.37e-13;1!UBERON:0001343;5.37e-13;1!UBERON:0004910;5.37e-13;1!UBERON:0004813;5.37e-13;1!UBERON:0004903;3.92e-07;2!UBERON:0004909;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.33e-13,1;UBERON:0001343,3.33e-13,1;UBERON:0004910,3.33e-13,1;UBERON:0005154,3.33e-13,1;UBERON:0005295,3.33e-13,1;UBERON:0004813,3.33e-13,1;UBERON:0005297,3.33e-13,1;UBERON:0005294,3.33e-13,1;UBERON:0010141,3.33e-13,1;UBERON:0005891,3.33e-13,1;UBERON:0004909,3.09e-07,2;UBERON:0004903,4.98e-07,2;UBERON:0002173,4.98e-07,2;UBERON:0002186,4.98e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0,0.61560529038394,0.408001382488506,0.313454721478088,2.0036519099174,0.410623275218653,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,1.79327847615945,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.661743720148475,0.443458794925128,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0,0.309157587715317,0,0,0,0.389748020644795,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0.200506470303285,0,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,1.37354197227515,2.80532299729999,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,0,0,0,0.608731130888112,0.6196469961995,1.12678241012897,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.222886768554957,1.13654458722565,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0.124252535565433,0,2.58217991539867,2.71967400412066,0.203996435272644,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0,0.0824158583811665,0.13480708770837,0.688992370603241,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.19271615249795,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.694567422971502,0.244736704506468,1.61179956973339,0.617602894321944,0.657852148736121,0,0,0,0,1.38172136692479,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.892769693028288,0,0,0,0,0,0.315543124386369,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:57839268..57839277,+ | |||
}} |
Revision as of 14:52, 11 September 2013
Short description: | p@chr17:57839268..57839277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57839268..57839277, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.33e-13 | 1 |
seminiferous tubule epithelial cell | 3.33e-13 | 1 |
Sertoli cell | 3.33e-13 | 1 |
osteoblast | 3.67e-10 | 11 |
osteoprogenitor cell | 3.67e-10 | 11 |
mesenchyme condensation cell | 3.67e-10 | 11 |
glial cell (sensu Vertebrata) | 6.16e-07 | 15 |
glial cell | 6.16e-07 | 15 |
glioblast | 6.16e-07 | 15 |
glioblast (sensu Vertebrata) | 6.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.33e-13 | 1 |
seminiferous tubule of testis | 3.33e-13 | 1 |
epithelium of male gonad | 3.33e-13 | 1 |
epithelial cord | 3.33e-13 | 1 |
sex cord | 3.33e-13 | 1 |
seminiferous tubule epithelium | 3.33e-13 | 1 |
testis sex cord | 3.33e-13 | 1 |
genital ridge | 3.33e-13 | 1 |
primitive sex cord of indifferent gonad | 3.33e-13 | 1 |
coelomic epithelium | 3.33e-13 | 1 |
epithelium of gonad | 3.09e-07 | 2 |
bronchoalveolar duct junction | 4.98e-07 | 2 |
alveolar duct | 4.98e-07 | 2 |
bronchiole | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.98e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.