FFCP PHASE1:Hg19::chr17:5138099..5138164,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=388325|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=33504|TSSclassifier=S|UniProt=A8MWA7,Q6UWF3|association_with_transcript=0bp_to_ENST00000399592,ENST00000399600_5end|coexpression_cluster_id=C780|description=CAGE_peak_1_at_SCIMP_5end|id=chr17:5138099..5138164,-|ontology_enrichment_celltype=CL:0002087!1.64e-54!119;CL:0000738!1.39e-49!140;CL:0002031!5.95e-48!124;CL:0000037!4.02e-42!172;CL:0000566!4.02e-42!172;CL:0002194!2.20e-40!63;CL:0000576!2.20e-40!63;CL:0000040!2.20e-40!63;CL:0000559!2.20e-40!63;CL:0002009!1.97e-39!65;CL:0002032!4.80e-39!165;CL:0000837!4.80e-39!165;CL:0000988!2.21e-37!182;CL:0000766!4.82e-36!76;CL:0002057!6.25e-36!42;CL:0000557!2.94e-35!71;CL:0000839!8.18e-35!70;CL:0000860!3.25e-32!45;CL:0000763!1.64e-24!112;CL:0000049!1.64e-24!112;CL:0000945!1.93e-16!24;CL:0000826!1.93e-16!24;CL:0000838!1.41e-13!52;CL:0000542!4.49e-13!53;CL:0000051!4.49e-13!53;CL:0000236!1.48e-11!14;CL:0002393!1.83e-09!9;CL:0002397!1.83e-09!9|ontology_enrichment_celltype_v019=CL:0000860;2.28e-27;33!CL:0002057;2.28e-27;33!CL:0000473;3.50e-27;39!CL:0000234;3.50e-27;39!CL:0000576;9.59e-27;48!CL:0000766;4.37e-18;69!CL:0000945;1.03e-16;24!CL:0002087;1.87e-15;104!CL:0000738;6.58e-12;136!CL:0000236;1.21e-11;13!CL:0000763;7.91e-10;100!CL:0002393;5.86e-07;6!CL:0002397;5.86e-07;6!CL:0000542;9.60e-07;53!CL:0000988;9.91e-07;177|ontology_enrichment_celltype_v019_2=CL:0002087,3.01e-57,115;CL:0000738,1.36e-51,136;CL:0002194,9.76e-49,59;CL:0000576,9.76e-49,59;CL:0000040,9.76e-49,59;CL:0000559,9.76e-49,59;CL:0002031,1.41e-48,120;CL:0002009,2.40e-46,61;CL:0000473,3.74e-44,48;CL:0000234,3.74e-44,48;CL:0000037,1.05e-43,168;CL:0000766,2.10e-43,72;CL:0000557,1.66e-41,67;CL:0000839,5.11e-41,66;CL:0002032,2.29e-40,161;CL:0000837,2.29e-40,161;CL:0000988,1.89e-39,177;CL:0000860,6.75e-39,42;CL:0002057,6.75e-39,42;CL:0000763,1.50e-28,108;CL:0000049,1.50e-28,108;CL:0000945,1.07e-16,24;CL:0000826,1.07e-16,24;CL:0000236,1.77e-12,14;CL:0000838,4.71e-11,52;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0002393,3.84e-10,9;CL:0002397,3.84e-10,9|ontology_enrichment_development_v019=CL:0002057;6.99e-28;42!CL:0000049;2.81e-09;108!CL:0000051;9.60e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.88e-42!115;UBERON:0002390!1.27e-39!102;UBERON:0003061!1.27e-39!102;UBERON:0002193!6.01e-36!112;UBERON:0002371!2.08e-30!80;UBERON:0001474!1.53e-26!86;UBERON:0002405!6.11e-25!115;UBERON:0004765!2.38e-20!101;UBERON:0001434!2.38e-20!101;UBERON:0001049!5.18e-12!57;UBERON:0005068!5.18e-12!57;UBERON:0006241!5.18e-12!57;UBERON:0007135!5.18e-12!57;UBERON:0003081!2.15e-11!216;UBERON:0003080!2.67e-09!42;UBERON:0002780!4.24e-09!41;UBERON:0001890!4.24e-09!41;UBERON:0006240!4.24e-09!41;UBERON:0002616!6.34e-09!59;UBERON:0000178!9.85e-08!15;UBERON:0000179!9.85e-08!15;UBERON:0000463!9.85e-08!15;UBERON:0000479!1.03e-07!787;UBERON:0002204!1.17e-07!167;UBERON:0001893!5.05e-07!34;UBERON:0002020!8.26e-07!34;UBERON:0003528!8.26e-07!34;UBERON:0003075!9.13e-07!86;UBERON:0007284!9.13e-07!86|ontology_enrichment_uberon_v019=UBERON:0007023;1.14e-08;114!UBERON:0000178;2.01e-08;15!UBERON:0000179;2.01e-08;15!UBERON:0000463;2.01e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.00e-45,98;UBERON:0003061,3.00e-45,98;UBERON:0002193,2.83e-41,108;UBERON:0007023,1.02e-35,114;UBERON:0002371,5.68e-35,76;UBERON:0002405,1.79e-33,93;UBERON:0001474,1.11e-30,82;UBERON:0004765,6.59e-26,90;UBERON:0001434,4.27e-21,100;UBERON:0003081,2.88e-15,203;UBERON:0000479,2.18e-09,773;UBERON:0001049,2.33e-09,56;UBERON:0005068,2.33e-09,56;UBERON:0006241,2.33e-09,56;UBERON:0007135,2.33e-09,56;UBERON:0000178,2.05e-08,15;UBERON:0000179,2.05e-08,15;UBERON:0000463,2.05e-08,15;UBERON:0002204,3.48e-08,167;UBERON:0000073,3.56e-08,53;UBERON:0002616,3.56e-08,53;UBERON:0002780,1.49e-07,41;UBERON:0001890,1.49e-07,41;UBERON:0003080,1.49e-07,41;UBERON:0006240,1.49e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,137.467716940564,111.410499883576,131.761847919099,136.890768343419,49.5139923545404,58.0560462435285,0,0,0,11.7750144882058,12.3687232264057,2.64240395401362,50.9675775849327,47.5290340504236,39.0619567288533,59.5615161478199,114.658357770719,116.939307705921,128.968237797474,129.611448685262,125.173375572913,93.4364728360852,61.6751832032739,65.657750629762,69.6215589419604,55.8430340233439,70.708186736687,75.1545584005828,81.9765548151459,54.1705946377367,102.027348032092,74.5033789657919,78.2037725868894,106.211110652703,139.925055805177,111.244659889033,91.3688101517204,72.8042350318956,88.6547481108004,53.3984999076595,38.5821952789975,28.6498234537965,67.3346422888072,68.8357452314666,84.0520829008801,64.7777467817705,87.6500773650404,76.9003601481349,473.000586052438,331.662707945468,338.808371141535,240.720256546939,196.281198943849,329.005275968923,336.030024870932,303.94468276021,369.529583065854,276.31410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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=388325 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33504 | |||
|TSSclassifier=S | |||
|UniProt=A8MWA7,Q6UWF3 | |||
|association_with_transcript=0bp_to_ENST00000399592,ENST00000399600_5end | |||
|coexpression_cluster_id=C780 | |||
|description=CAGE_peak_1_at_SCIMP_5end | |||
|id=chr17:5138099..5138164,- | |||
|ontology_enrichment_celltype=CL:0002087!1.64e-54!119;CL:0000738!1.39e-49!140;CL:0002031!5.95e-48!124;CL:0000037!4.02e-42!172;CL:0000566!4.02e-42!172;CL:0002194!2.20e-40!63;CL:0000576!2.20e-40!63;CL:0000040!2.20e-40!63;CL:0000559!2.20e-40!63;CL:0002009!1.97e-39!65;CL:0002032!4.80e-39!165;CL:0000837!4.80e-39!165;CL:0000988!2.21e-37!182;CL:0000766!4.82e-36!76;CL:0002057!6.25e-36!42;CL:0000557!2.94e-35!71;CL:0000839!8.18e-35!70;CL:0000860!3.25e-32!45;CL:0000763!1.64e-24!112;CL:0000049!1.64e-24!112;CL:0000945!1.93e-16!24;CL:0000826!1.93e-16!24;CL:0000838!1.41e-13!52;CL:0000542!4.49e-13!53;CL:0000051!4.49e-13!53;CL:0000236!1.48e-11!14;CL:0002393!1.83e-09!9;CL:0002397!1.83e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-27;33!CL:0002057;2.28e-27;33!CL:0000473;3.50e-27;39!CL:0000234;3.50e-27;39!CL:0000576;9.59e-27;48!CL:0000766;4.37e-18;69!CL:0000945;1.03e-16;24!CL:0002087;1.87e-15;104!CL:0000738;6.58e-12;136!CL:0000236;1.21e-11;13!CL:0000763;7.91e-10;100!CL:0002393;5.86e-07;6!CL:0002397;5.86e-07;6!CL:0000542;9.60e-07;53!CL:0000988;9.91e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.01e-57,115;CL:0000738,1.36e-51,136;CL:0002194,9.76e-49,59;CL:0000576,9.76e-49,59;CL:0000040,9.76e-49,59;CL:0000559,9.76e-49,59;CL:0002031,1.41e-48,120;CL:0002009,2.40e-46,61;CL:0000473,3.74e-44,48;CL:0000234,3.74e-44,48;CL:0000037,1.05e-43,168;CL:0000766,2.10e-43,72;CL:0000557,1.66e-41,67;CL:0000839,5.11e-41,66;CL:0002032,2.29e-40,161;CL:0000837,2.29e-40,161;CL:0000988,1.89e-39,177;CL:0000860,6.75e-39,42;CL:0002057,6.75e-39,42;CL:0000763,1.50e-28,108;CL:0000049,1.50e-28,108;CL:0000945,1.07e-16,24;CL:0000826,1.07e-16,24;CL:0000236,1.77e-12,14;CL:0000838,4.71e-11,52;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0002393,3.84e-10,9;CL:0002397,3.84e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.99e-28;42!CL:0000049;2.81e-09;108!CL:0000051;9.60e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-42!115;UBERON:0002390!1.27e-39!102;UBERON:0003061!1.27e-39!102;UBERON:0002193!6.01e-36!112;UBERON:0002371!2.08e-30!80;UBERON:0001474!1.53e-26!86;UBERON:0002405!6.11e-25!115;UBERON:0004765!2.38e-20!101;UBERON:0001434!2.38e-20!101;UBERON:0001049!5.18e-12!57;UBERON:0005068!5.18e-12!57;UBERON:0006241!5.18e-12!57;UBERON:0007135!5.18e-12!57;UBERON:0003081!2.15e-11!216;UBERON:0003080!2.67e-09!42;UBERON:0002780!4.24e-09!41;UBERON:0001890!4.24e-09!41;UBERON:0006240!4.24e-09!41;UBERON:0002616!6.34e-09!59;UBERON:0000178!9.85e-08!15;UBERON:0000179!9.85e-08!15;UBERON:0000463!9.85e-08!15;UBERON:0000479!1.03e-07!787;UBERON:0002204!1.17e-07!167;UBERON:0001893!5.05e-07!34;UBERON:0002020!8.26e-07!34;UBERON:0003528!8.26e-07!34;UBERON:0003075!9.13e-07!86;UBERON:0007284!9.13e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.14e-08;114!UBERON:0000178;2.01e-08;15!UBERON:0000179;2.01e-08;15!UBERON:0000463;2.01e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.00e-45,98;UBERON:0003061,3.00e-45,98;UBERON:0002193,2.83e-41,108;UBERON:0007023,1.02e-35,114;UBERON:0002371,5.68e-35,76;UBERON:0002405,1.79e-33,93;UBERON:0001474,1.11e-30,82;UBERON:0004765,6.59e-26,90;UBERON:0001434,4.27e-21,100;UBERON:0003081,2.88e-15,203;UBERON:0000479,2.18e-09,773;UBERON:0001049,2.33e-09,56;UBERON:0005068,2.33e-09,56;UBERON:0006241,2.33e-09,56;UBERON:0007135,2.33e-09,56;UBERON:0000178,2.05e-08,15;UBERON:0000179,2.05e-08,15;UBERON:0000463,2.05e-08,15;UBERON:0002204,3.48e-08,167;UBERON:0000073,3.56e-08,53;UBERON:0002616,3.56e-08,53;UBERON:0002780,1.49e-07,41;UBERON:0001890,1.49e-07,41;UBERON:0003080,1.49e-07,41;UBERON:0006240,1.49e-07,41 | |||
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| |||
|short_description=p1@SCIMP | |||
}} |
Revision as of 14:38, 11 September 2013
Short description: | p1@SCIMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCIMP_5end |
Coexpression cluster: | C780_Dendritic_CD14_CD14CD16_CD19_splenic_xeroderma_spleen |
Association with transcript: | 0bp_to_ENST00000399592, ENST00000399600_5end |
EntrezGene: | SCIMP |
HGNC: | 33504 |
UniProt: | A8MWA7Q6UWF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.00e-45 | 98 |
blood island | 3.00e-45 | 98 |
hemolymphoid system | 2.83e-41 | 108 |
adult organism | 1.02e-35 | 114 |
bone marrow | 5.68e-35 | 76 |
immune system | 1.79e-33 | 93 |
bone element | 1.11e-30 | 82 |
skeletal element | 6.59e-26 | 90 |
skeletal system | 4.27e-21 | 100 |
lateral plate mesoderm | 2.88e-15 | 203 |
tissue | 2.18e-09 | 773 |
neural tube | 2.33e-09 | 56 |
neural rod | 2.33e-09 | 56 |
future spinal cord | 2.33e-09 | 56 |
neural keel | 2.33e-09 | 56 |
blood | 2.05e-08 | 15 |
haemolymphatic fluid | 2.05e-08 | 15 |
organism substance | 2.05e-08 | 15 |
musculoskeletal system | 3.48e-08 | 167 |
regional part of nervous system | 3.56e-08 | 53 |
regional part of brain | 3.56e-08 | 53 |
regional part of forebrain | 1.49e-07 | 41 |
forebrain | 1.49e-07 | 41 |
anterior neural tube | 1.49e-07 | 41 |
future forebrain | 1.49e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.