FFCP PHASE1:Hg19::chr17:46806404..46806415,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5112|TSSclassifier=N|UniProt=Q92826|association_with_transcript=124bp_to_ENST00000290295_5end|coexpression_cluster_id=C254|description=CAGE_peak_7_at_HOXB13_5end|id=chr17:46806404..46806415,-|ontology_enrichment_celltype=CL:0002231!4.05e-08!3|ontology_enrichment_celltype_v019=CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0000333;3.22e-09;5|ontology_enrichment_celltype_v019_2=CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4|ontology_enrichment_development_v019=UBERON:0009847;2.19e-53;3!UBERON:0003353;2.19e-53;3|ontology_enrichment_disease=DOID:171!5.12e-20!10;DOID:3095!3.47e-15!22;DOID:2994!3.47e-15!22;DOID:0050687!1.04e-12!143;DOID:162!1.26e-10!235;DOID:14566!2.71e-10!239;DOID:1115!1.42e-09!20;DOID:0060085!7.15e-07!1;DOID:3165!7.15e-07!1;DOID:0060121!7.15e-07!1;DOID:2438!7.15e-07!1;DOID:4418!7.15e-07!1|ontology_enrichment_disease_v019=DOID:3193;5.69e-21;2!DOID:962;5.69e-21;2!DOID:1192;1.83e-14;3!DOID:1115;5.93e-09;20!DOID:169;6.78e-08;6|ontology_enrichment_disease_v019_2=DOID:3193,6.96e-21,2;DOID:962,6.96e-21,2;DOID:1192,2.09e-14,3;DOID:1115,6.17e-09,20;DOID:169,7.25e-08,6|ontology_enrichment_uberon=UBERON:0001046!3.28e-10!19;UBERON:0003101!1.22e-08!22;UBERON:0000079!1.22e-08!22;UBERON:0002367!1.87e-08!11;UBERON:0010147!1.87e-08!11;UBERON:0009846!1.87e-08!11;UBERON:0003353!1.87e-08!11;UBERON:0004902!1.87e-08!11;UBERON:0003820!1.87e-08!11;UBERON:0009847!1.87e-08!11;UBERON:0003937!9.35e-08!12;UBERON:0005399!9.35e-08!12|ontology_enrichment_uberon_v019=UBERON:0003714;5.69e-21;2!UBERON:0002367;1.88e-15;11!UBERON:0010147;1.88e-15;11!UBERON:0003937;2.94e-14;12!UBERON:0005399;2.94e-14;12!UBERON:0000013;3.22e-09;5!UBERON:0002410;3.22e-09;5!UBERON:0000365;3.22e-09;5!UBERON:0003101;3.04e-08;22!UBERON:0000079;3.04e-08;22!UBERON:0005910;6.78e-08;6!UBERON:0000077;6.82e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.96e-21,2;UBERON:0002367,1.88e-15,11;UBERON:0010147,1.88e-15,11;UBERON:0009846,1.88e-15,11;UBERON:0003353,1.88e-15,11;UBERON:0004902,1.88e-15,11;UBERON:0003820,1.88e-15,11;UBERON:0009847,1.88e-15,11;UBERON:0003937,2.94e-14,12;UBERON:0005399,2.94e-14,12;UBERON:0000162,2.24e-12,14;UBERON:0001353,2.24e-12,14;UBERON:0000163,2.24e-12,14;UBERON:0006866,2.24e-12,14;UBERON:0000164,2.24e-12,14;UBERON:0000931,2.24e-12,14;UBERON:0004122,1.27e-11,15;UBERON:0001046,2.17e-09,19;UBERON:0000365,2.97e-09,5;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0006554,2.10e-08,47;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22;UBERON:0001008,3.04e-08,48;UBERON:0005910,6.34e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0.425149840203366,0.247871528518004,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0,10.7894459835307,1.49136876415977,0,0.280272163313789,0,0,0,0,0,0.116241425368125,4.34645680756449,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p7@HOXB13}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5112 | |||
|TSSclassifier=N | |||
|UniProt=Q92826 | |||
|association_with_transcript=124bp_to_ENST00000290295_5end | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_7_at_HOXB13_5end | |||
|id=chr17:46806404..46806415,- | |||
|ontology_enrichment_celltype=CL:0002231!4.05e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0000333;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.19e-53;3!UBERON:0003353;2.19e-53;3 | |||
|ontology_enrichment_disease=DOID:171!5.12e-20!10;DOID:3095!3.47e-15!22;DOID:2994!3.47e-15!22;DOID:0050687!1.04e-12!143;DOID:162!1.26e-10!235;DOID:14566!2.71e-10!239;DOID:1115!1.42e-09!20;DOID:0060085!7.15e-07!1;DOID:3165!7.15e-07!1;DOID:0060121!7.15e-07!1;DOID:2438!7.15e-07!1;DOID:4418!7.15e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3193;5.69e-21;2!DOID:962;5.69e-21;2!DOID:1192;1.83e-14;3!DOID:1115;5.93e-09;20!DOID:169;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,6.96e-21,2;DOID:962,6.96e-21,2;DOID:1192,2.09e-14,3;DOID:1115,6.17e-09,20;DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001046!3.28e-10!19;UBERON:0003101!1.22e-08!22;UBERON:0000079!1.22e-08!22;UBERON:0002367!1.87e-08!11;UBERON:0010147!1.87e-08!11;UBERON:0009846!1.87e-08!11;UBERON:0003353!1.87e-08!11;UBERON:0004902!1.87e-08!11;UBERON:0003820!1.87e-08!11;UBERON:0009847!1.87e-08!11;UBERON:0003937!9.35e-08!12;UBERON:0005399!9.35e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;5.69e-21;2!UBERON:0002367;1.88e-15;11!UBERON:0010147;1.88e-15;11!UBERON:0003937;2.94e-14;12!UBERON:0005399;2.94e-14;12!UBERON:0000013;3.22e-09;5!UBERON:0002410;3.22e-09;5!UBERON:0000365;3.22e-09;5!UBERON:0003101;3.04e-08;22!UBERON:0000079;3.04e-08;22!UBERON:0005910;6.78e-08;6!UBERON:0000077;6.82e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.96e-21,2;UBERON:0002367,1.88e-15,11;UBERON:0010147,1.88e-15,11;UBERON:0009846,1.88e-15,11;UBERON:0003353,1.88e-15,11;UBERON:0004902,1.88e-15,11;UBERON:0003820,1.88e-15,11;UBERON:0009847,1.88e-15,11;UBERON:0003937,2.94e-14,12;UBERON:0005399,2.94e-14,12;UBERON:0000162,2.24e-12,14;UBERON:0001353,2.24e-12,14;UBERON:0000163,2.24e-12,14;UBERON:0006866,2.24e-12,14;UBERON:0000164,2.24e-12,14;UBERON:0000931,2.24e-12,14;UBERON:0004122,1.27e-11,15;UBERON:0001046,2.17e-09,19;UBERON:0000365,2.97e-09,5;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0006554,2.10e-08,47;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22;UBERON:0001008,3.04e-08,48;UBERON:0005910,6.34e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0.425149840203366,0.247871528518004,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0,10.7894459835307,1.49136876415977,0,0.280272163313789,0,0,0,0,0,0.116241425368125,4.34645680756449,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p7@HOXB13 | |||
}} |
Revision as of 14:17, 11 September 2013
Short description: | p7@HOXB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HOXB13_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | 124bp_to_ENST00000290295_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 6.96e-21 | 2 |
prostate gland | 1.88e-15 | 11 |
male accessory sex gland | 1.88e-15 | 11 |
embryonic cloacal epithelium | 1.88e-15 | 11 |
epithelium of hindgut | 1.88e-15 | 11 |
urogenital sinus epithelium | 1.88e-15 | 11 |
prostate bud | 1.88e-15 | 11 |
prostate field | 1.88e-15 | 11 |
sex gland | 2.94e-14 | 12 |
male reproductive gland | 2.94e-14 | 12 |
cloaca | 2.24e-12 | 14 |
anal region | 2.24e-12 | 14 |
embryonic cloaca | 2.24e-12 | 14 |
terminal part of digestive tract | 2.24e-12 | 14 |
primitive urogenital sinus | 2.24e-12 | 14 |
proctodeum | 2.24e-12 | 14 |
genitourinary system | 1.27e-11 | 15 |
hindgut | 2.17e-09 | 19 |
urothelium | 2.97e-09 | 5 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
urinary system structure | 2.10e-08 | 47 |
male organism | 3.04e-08 | 22 |
male reproductive system | 3.04e-08 | 22 |
renal system | 3.04e-08 | 48 |
transitional epithelium | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 6.96e-21 | 2 |
neurofibroma | 6.96e-21 | 2 |
peripheral nervous system neoplasm | 2.09e-14 | 3 |
sarcoma | 6.17e-09 | 20 |
neuroendocrine tumor | 7.25e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.