FFCP PHASE1:Hg19::chr17:46670612..46670651,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=392bp_to_AB464575_5end|description=CAGE_peak_4_at_AB464575_5end|id=chr17:46670612..46670651,-|ontology_enrichment_celltype=CL:0000055!4.18e-11!180;CL:0000192!1.05e-10!42;CL:0000514!1.05e-10!42;CL:0000187!3.21e-10!54;CL:0000680!6.63e-10!57;CL:0000056!6.63e-10!57;CL:0000355!6.63e-10!57;CL:0002334!1.12e-09!12;CL:0000183!3.12e-09!59;CL:0000393!2.75e-08!60;CL:0000211!2.75e-08!60;CL:0000359!5.16e-07!32;CL:0002539!8.79e-07!10|ontology_enrichment_celltype_v019=CL:0002334;5.50e-14;12!CL:0002582;1.08e-11;3!CL:0002539;6.65e-09;10!CL:0002262;2.12e-08;2!CL:0002554;2.12e-08;2!CL:1000398;2.12e-08;2!CL:0002583;2.12e-08;2|ontology_enrichment_celltype_v019_2=CL:0002334,8.25e-14,12;CL:0002582,1.46e-11,3;CL:0002539,5.45e-09,10;CL:0002554,9.89e-09,2;CL:0002262,1.44e-08,2;CL:1000398,1.44e-08,2;CL:0002583,3.50e-08,2;CL:0000057,2.26e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!5.16e-15!216;UBERON:0004290!4.06e-13!70;UBERON:0009569!1.25e-11!113;UBERON:0000486!8.30e-11!82;UBERON:0000483!1.47e-10!309;UBERON:0005256!1.75e-10!143;UBERON:0000119!3.41e-10!312;UBERON:0002385!9.28e-10!63;UBERON:0001015!9.28e-10!63;UBERON:0000383!9.28e-10!63;UBERON:0000914!9.89e-10!83;UBERON:0002329!9.89e-10!83;UBERON:0003077!9.89e-10!83;UBERON:0003059!9.89e-10!83;UBERON:0007282!9.89e-10!83;UBERON:0009618!9.89e-10!83;UBERON:0007285!9.89e-10!83;UBERON:0001134!1.70e-09!61;UBERON:0002036!1.70e-09!61;UBERON:0003082!1.70e-09!61;UBERON:0000025!2.28e-09!194;UBERON:0003914!2.37e-09!118;UBERON:0000475!4.38e-09!365;UBERON:0003104!1.85e-08!238;UBERON:0009142!1.85e-08!238;UBERON:0005177!6.92e-08!107;UBERON:0000490!2.06e-07!138;UBERON:0001135!3.26e-07!15;UBERON:0001637!5.24e-07!42;UBERON:0003509!5.24e-07!42;UBERON:0004572!5.24e-07!42;UBERON:0000466!5.98e-07!126;UBERON:0004237!8.79e-07!10;UBERON:0004695!8.79e-07!10;UBERON:0002111!8.79e-07!10;UBERON:0004178!8.79e-07!10|ontology_enrichment_uberon_v019=UBERON:0002067;8.15e-10;9!UBERON:0004237;6.65e-09;10!UBERON:0004695;6.65e-09;10!UBERON:0002111;6.65e-09;10!UBERON:0004178;6.65e-09;10!UBERON:0001281;2.12e-08;2!UBERON:0003497;2.12e-08;2!UBERON:0003909;2.12e-08;2!UBERON:0003835;2.12e-08;2!UBERON:0004733;1.04e-07;12!UBERON:0002028;1.04e-07;12!UBERON:0004732;4.34e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.93e-11,15;UBERON:0003057,1.93e-11,15;UBERON:0002067,6.59e-10,9;UBERON:0004016,6.59e-10,9;UBERON:0010083,6.59e-10,9;UBERON:0004237,5.45e-09,10;UBERON:0004695,5.45e-09,10;UBERON:0002111,5.45e-09,10;UBERON:0004178,5.45e-09,10;UBERON:0001281,1.44e-08,2;UBERON:0003497,1.44e-08,2;UBERON:0003909,1.44e-08,2;UBERON:0003835,1.44e-08,2;UBERON:0007503,2.60e-08,78;UBERON:0002329,3.88e-08,71;UBERON:0003059,3.88e-08,71;UBERON:0007282,3.88e-08,71;UBERON:0004290,3.88e-08,71;UBERON:0009618,3.88e-08,71;UBERON:0003077,5.58e-08,72;UBERON:0007285,5.58e-08,72;UBERON:0007524,7.95e-08,73;UBERON:0004733,1.04e-07,12;UBERON:0002028,1.04e-07,12;UBERON:0007277,1.04e-07,12;UBERON:0005256,3.30e-07,122;UBERON:0004732,4.36e-07,13;UBERON:0002100,8.51e-07,199|phase1_expression=0.181678379270557,0.428201047781966,1.55049844505568,0,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,0,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.61560529038394,2.44800829493104,1.25381888591235,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,1.04497483268405,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,1.71141546463335,1.04614076386261,1.40921398372518,0.323745888736263,0.561803226808994,0,0,0,0,0,1.82032272387605,2.87447256726495,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.584622030967192,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,2.057870056657,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=392bp_to_AB464575_5end | |||
|description=CAGE_peak_4_at_AB464575_5end | |||
|id=chr17:46670612..46670651,- | |||
|ontology_enrichment_celltype=CL:0000055!4.18e-11!180;CL:0000192!1.05e-10!42;CL:0000514!1.05e-10!42;CL:0000187!3.21e-10!54;CL:0000680!6.63e-10!57;CL:0000056!6.63e-10!57;CL:0000355!6.63e-10!57;CL:0002334!1.12e-09!12;CL:0000183!3.12e-09!59;CL:0000393!2.75e-08!60;CL:0000211!2.75e-08!60;CL:0000359!5.16e-07!32;CL:0002539!8.79e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.50e-14;12!CL:0002582;1.08e-11;3!CL:0002539;6.65e-09;10!CL:0002262;2.12e-08;2!CL:0002554;2.12e-08;2!CL:1000398;2.12e-08;2!CL:0002583;2.12e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.25e-14,12;CL:0002582,1.46e-11,3;CL:0002539,5.45e-09,10;CL:0002554,9.89e-09,2;CL:0002262,1.44e-08,2;CL:1000398,1.44e-08,2;CL:0002583,3.50e-08,2;CL:0000057,2.26e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.16e-15!216;UBERON:0004290!4.06e-13!70;UBERON:0009569!1.25e-11!113;UBERON:0000486!8.30e-11!82;UBERON:0000483!1.47e-10!309;UBERON:0005256!1.75e-10!143;UBERON:0000119!3.41e-10!312;UBERON:0002385!9.28e-10!63;UBERON:0001015!9.28e-10!63;UBERON:0000383!9.28e-10!63;UBERON:0000914!9.89e-10!83;UBERON:0002329!9.89e-10!83;UBERON:0003077!9.89e-10!83;UBERON:0003059!9.89e-10!83;UBERON:0007282!9.89e-10!83;UBERON:0009618!9.89e-10!83;UBERON:0007285!9.89e-10!83;UBERON:0001134!1.70e-09!61;UBERON:0002036!1.70e-09!61;UBERON:0003082!1.70e-09!61;UBERON:0000025!2.28e-09!194;UBERON:0003914!2.37e-09!118;UBERON:0000475!4.38e-09!365;UBERON:0003104!1.85e-08!238;UBERON:0009142!1.85e-08!238;UBERON:0005177!6.92e-08!107;UBERON:0000490!2.06e-07!138;UBERON:0001135!3.26e-07!15;UBERON:0001637!5.24e-07!42;UBERON:0003509!5.24e-07!42;UBERON:0004572!5.24e-07!42;UBERON:0000466!5.98e-07!126;UBERON:0004237!8.79e-07!10;UBERON:0004695!8.79e-07!10;UBERON:0002111!8.79e-07!10;UBERON:0004178!8.79e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;8.15e-10;9!UBERON:0004237;6.65e-09;10!UBERON:0004695;6.65e-09;10!UBERON:0002111;6.65e-09;10!UBERON:0004178;6.65e-09;10!UBERON:0001281;2.12e-08;2!UBERON:0003497;2.12e-08;2!UBERON:0003909;2.12e-08;2!UBERON:0003835;2.12e-08;2!UBERON:0004733;1.04e-07;12!UBERON:0002028;1.04e-07;12!UBERON:0004732;4.34e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.93e-11,15;UBERON:0003057,1.93e-11,15;UBERON:0002067,6.59e-10,9;UBERON:0004016,6.59e-10,9;UBERON:0010083,6.59e-10,9;UBERON:0004237,5.45e-09,10;UBERON:0004695,5.45e-09,10;UBERON:0002111,5.45e-09,10;UBERON:0004178,5.45e-09,10;UBERON:0001281,1.44e-08,2;UBERON:0003497,1.44e-08,2;UBERON:0003909,1.44e-08,2;UBERON:0003835,1.44e-08,2;UBERON:0007503,2.60e-08,78;UBERON:0002329,3.88e-08,71;UBERON:0003059,3.88e-08,71;UBERON:0007282,3.88e-08,71;UBERON:0004290,3.88e-08,71;UBERON:0009618,3.88e-08,71;UBERON:0003077,5.58e-08,72;UBERON:0007285,5.58e-08,72;UBERON:0007524,7.95e-08,73;UBERON:0004733,1.04e-07,12;UBERON:0002028,1.04e-07,12;UBERON:0007277,1.04e-07,12;UBERON:0005256,3.30e-07,122;UBERON:0004732,4.36e-07,13;UBERON:0002100,8.51e-07,199 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.55049844505568,0,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,0,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.61560529038394,2.44800829493104,1.25381888591235,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,1.04497483268405,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,1.71141546463335,1.04614076386261,1.40921398372518,0.323745888736263,0.561803226808994,0,0,0,0,0,1.82032272387605,2.87447256726495,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.584622030967192,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,2.057870056657,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,1.92208723883551,1.02341449813341,0.804269605718038,0,2.31314540703983,1.06537035187876,1.06765302817952,4.67328986265259,1.27831416305955,0,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,4.62681758070868,0,0,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.676695028044854,0.154048617114644,0.460511024178389,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,9.29691098594571,0.31481234683064,1.3940745403212,0,1.06461206063404,1.73986598415015,0,0,0,0.949138274156178,1.33441135746677,2.04718233049067,0.42793898803392,0,0.78494864019923,0.359744915166629,0,0.353437207037059,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,4.52032466480971,1.10273068709225,0.66343897524122,0,4.6302042741335,0.655894752046633,0,0,0.845086807596724,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0.597743964753209,0.552567831062295,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,1.13843818411917,0.554698692052555,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0.572682980829578,0.343189995723929,0,0.124252535565433,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,0.387848869084652,0,0,0,0.533937062838473,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,1.33114861844223,6.52012230884526,0,0,0,0,0,0,0,0.74627401443437,0.233713309847224,0.554805861502613,0,0,0,0.457680136793847,1.51230923763239,0.15543720058278,0,0.318593534327405,0,0.621051827505038,0.414706207840855,1.59505028734797,0.521745061811734,0,0.761610424337591,1.62748293281865,0,0.214821114084977,0,0,6.40044423461046,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,5.50554837112337,0,0,0.111231401892069,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0.255640214277473,0.846774100381858,0,1.5510319283216,2.8666168169323,0,0.098150233615243,0,0,0,0,0,1.40363678077263,0.795803100645473,0.356760272332706,0,0,1.20770274853339,0.926089897295336,0,0.470317296361523,0,0.235676547101626,4.3187862765288,0.594092800654172,1.2679671827502,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0.743990036333503,0,0,0,0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| |||
|short_description=p4@AB464575 | |||
}} |
Revision as of 14:15, 11 September 2013
Short description: | p4@AB464575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AB464575_5end |
Coexpression cluster: | NA |
Association with transcript: | 392bp_to_AB464575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.25e-14 | 12 |
visceral preadipocyte | 1.46e-11 | 3 |
aortic smooth muscle cell | 5.45e-09 | 10 |
fibroblast of lymphatic vessel | 9.89e-09 | 2 |
endothelial cell of sinusoid | 1.44e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.44e-08 | 2 |
subcutaneous preadipocyte | 3.50e-08 | 2 |
fibroblast | 2.26e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.93e-11 | 15 |
chordal neural plate | 1.93e-11 | 15 |
dermis | 6.59e-10 | 9 |
dermatome | 6.59e-10 | 9 |
future dermis | 6.59e-10 | 9 |
blood vessel smooth muscle | 5.45e-09 | 10 |
arterial system smooth muscle | 5.45e-09 | 10 |
artery smooth muscle tissue | 5.45e-09 | 10 |
aorta smooth muscle tissue | 5.45e-09 | 10 |
hepatic sinusoid | 1.44e-08 | 2 |
abdomen blood vessel | 1.44e-08 | 2 |
sinusoid | 1.44e-08 | 2 |
abdominal segment blood vessel | 1.44e-08 | 2 |
epithelial vesicle | 2.60e-08 | 78 |
somite | 3.88e-08 | 71 |
presomitic mesoderm | 3.88e-08 | 71 |
presumptive segmental plate | 3.88e-08 | 71 |
dermomyotome | 3.88e-08 | 71 |
trunk paraxial mesoderm | 3.88e-08 | 71 |
paraxial mesoderm | 5.58e-08 | 72 |
presumptive paraxial mesoderm | 5.58e-08 | 72 |
dense mesenchyme tissue | 7.95e-08 | 73 |
segmental subdivision of hindbrain | 1.04e-07 | 12 |
hindbrain | 1.04e-07 | 12 |
presumptive hindbrain | 1.04e-07 | 12 |
trunk mesenchyme | 3.30e-07 | 122 |
segmental subdivision of nervous system | 4.36e-07 | 13 |
trunk | 8.51e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.